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Fluorine in PDB 4ugb: Structure of Bacillus Subtilis Nitric Oxide Synthase in Complex with 6-(((5-(((2-(3-Fluorophenyl)Ethyl)Amino)Methyl)Pyridin-3-Yl)Oxy) Methyl)-4-Methylpyridin-2-Amine

Enzymatic activity of Structure of Bacillus Subtilis Nitric Oxide Synthase in Complex with 6-(((5-(((2-(3-Fluorophenyl)Ethyl)Amino)Methyl)Pyridin-3-Yl)Oxy) Methyl)-4-Methylpyridin-2-Amine

All present enzymatic activity of Structure of Bacillus Subtilis Nitric Oxide Synthase in Complex with 6-(((5-(((2-(3-Fluorophenyl)Ethyl)Amino)Methyl)Pyridin-3-Yl)Oxy) Methyl)-4-Methylpyridin-2-Amine:
1.14.13.165;

Protein crystallography data

The structure of Structure of Bacillus Subtilis Nitric Oxide Synthase in Complex with 6-(((5-(((2-(3-Fluorophenyl)Ethyl)Amino)Methyl)Pyridin-3-Yl)Oxy) Methyl)-4-Methylpyridin-2-Amine, PDB code: 4ugb was solved by J.K.Holden, T.L.Poulos, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 37.96 / 1.91
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 80.600, 95.050, 63.080, 90.00, 90.00, 90.00
R / Rfree (%) 18 / 22.8

Other elements in 4ugb:

The structure of Structure of Bacillus Subtilis Nitric Oxide Synthase in Complex with 6-(((5-(((2-(3-Fluorophenyl)Ethyl)Amino)Methyl)Pyridin-3-Yl)Oxy) Methyl)-4-Methylpyridin-2-Amine also contains other interesting chemical elements:

Iron (Fe) 1 atom
Chlorine (Cl) 1 atom

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Structure of Bacillus Subtilis Nitric Oxide Synthase in Complex with 6-(((5-(((2-(3-Fluorophenyl)Ethyl)Amino)Methyl)Pyridin-3-Yl)Oxy) Methyl)-4-Methylpyridin-2-Amine (pdb code 4ugb). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total only one binding site of Fluorine was determined in the Structure of Bacillus Subtilis Nitric Oxide Synthase in Complex with 6-(((5-(((2-(3-Fluorophenyl)Ethyl)Amino)Methyl)Pyridin-3-Yl)Oxy) Methyl)-4-Methylpyridin-2-Amine, PDB code: 4ugb:

Fluorine binding site 1 out of 1 in 4ugb

Go back to Fluorine Binding Sites List in 4ugb
Fluorine binding site 1 out of 1 in the Structure of Bacillus Subtilis Nitric Oxide Synthase in Complex with 6-(((5-(((2-(3-Fluorophenyl)Ethyl)Amino)Methyl)Pyridin-3-Yl)Oxy) Methyl)-4-Methylpyridin-2-Amine


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Structure of Bacillus Subtilis Nitric Oxide Synthase in Complex with 6-(((5-(((2-(3-Fluorophenyl)Ethyl)Amino)Methyl)Pyridin-3-Yl)Oxy) Methyl)-4-Methylpyridin-2-Amine within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F904

b:0.6
occ:1.00
F23 A:QJ7904 0.0 0.6 1.0
C23 A:QJ7904 1.3 0.1 1.0
C22 A:QJ7904 2.4 0.6 1.0
C24 A:QJ7904 2.4 0.7 1.0
O4 A:H4B902 2.5 86.4 1.0
N5 A:H4B902 3.4 88.0 1.0
C4 A:H4B902 3.5 89.9 1.0
C21 A:QJ7904 3.6 0.0 1.0
C25 A:QJ7904 3.6 0.5 1.0
C4A A:H4B902 3.9 88.5 1.0
C26 A:QJ7904 4.1 0.8 1.0
CZ2 A:TRP329 4.4 33.6 1.0
CH2 A:TRP329 4.5 35.7 1.0
C6 A:H4B902 4.5 86.8 1.0
N3 A:H4B902 4.7 95.8 1.0
C9 A:H4B902 4.7 87.8 1.0
NH2 A:ARG247 4.7 31.1 1.0
C20 A:QJ7904 4.9 0.9 1.0

Reference:

J.K.Holden, D.Dejam, M.C.Lewis, H.Huang, S.Kang, Q.Jing, F.Xue, R.B.Silverman, T.L.Poulos. Inhibitor Bound Crystal Structures of Bacterial Nitric Oxide Synthase. Biochemistry V. 54 4075 2015.
ISSN: ISSN 0006-2960
PubMed: 26062720
DOI: 10.1021/ACS.BIOCHEM.5B00431
Page generated: Tue Jul 15 00:57:32 2025

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