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Fluorine in PDB 5bjp: Crystal Structure of the Corn Rna Aptamer in Complex with Dfho, Iridium Hexammine Soak
Protein crystallography data
The structure of Crystal Structure of the Corn Rna Aptamer in Complex with Dfho, Iridium Hexammine Soak, PDB code: 5bjp
was solved by
K.D.Warner,
W.Song,
G.S.Filonov,
S.R.Jaffrey,
A.R.Ferre-D'amare,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 49.34 / 2.51 |
| Space group | P 21 21 21 |
| Cell size a, b, c (Å), α, β, γ (°) | 36.642, 55.438, 98.676, 90.00, 90.00, 90.00 |
| R / Rfree (%) | 19.1 / 23.9 |
Other elements in 5bjp:
The structure of Crystal Structure of the Corn Rna Aptamer in Complex with Dfho, Iridium Hexammine Soak also contains other interesting chemical elements:
| Magnesium | (Mg) | 2 atoms |
| Potassium | (K) | 4 atoms |
| Iridium | (Ir) | 2 atoms |
Fluorine Binding Sites:
The binding sites of Fluorine atom in the Crystal Structure of the Corn Rna Aptamer in Complex with Dfho, Iridium Hexammine Soak
(pdb code 5bjp). This binding sites where shown within
5.0 Angstroms radius around Fluorine atom.
In total 2 binding sites of Fluorine where determined in the Crystal Structure of the Corn Rna Aptamer in Complex with Dfho, Iridium Hexammine Soak, PDB code: 5bjp:
Jump to Fluorine binding site number: 1; 2;
In total 2 binding sites of Fluorine where determined in the Crystal Structure of the Corn Rna Aptamer in Complex with Dfho, Iridium Hexammine Soak, PDB code: 5bjp:
Jump to Fluorine binding site number: 1; 2;
Fluorine binding site 1 out of 2 in 5bjp
Go back to
Fluorine Binding Sites List in 5bjp
Fluorine binding site 1 out
of 2 in the Crystal Structure of the Corn Rna Aptamer in Complex with Dfho, Iridium Hexammine Soak
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Fluorine with other atoms in the F binding
site number 1 of Crystal Structure of the Corn Rna Aptamer in Complex with Dfho, Iridium Hexammine Soak within 5.0Å range:
|
Fluorine binding site 2 out of 2 in 5bjp
Go back to
Fluorine Binding Sites List in 5bjp
Fluorine binding site 2 out
of 2 in the Crystal Structure of the Corn Rna Aptamer in Complex with Dfho, Iridium Hexammine Soak
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Fluorine with other atoms in the F binding
site number 2 of Crystal Structure of the Corn Rna Aptamer in Complex with Dfho, Iridium Hexammine Soak within 5.0Å range:
|
Reference:
K.D.Warner,
L.Sjekloca,
W.Song,
G.S.Filonov,
S.R.Jaffrey,
A.R.Ferre-D'amare.
A Homodimer Interface Without Base Pairs in An Rna Mimic of Red Fluorescent Protein. Nat. Chem. Biol. V. 13 1195 2017.
ISSN: ESSN 1552-4469
PubMed: 28945234
DOI: 10.1038/NCHEMBIO.2475
Page generated: Tue Jul 15 02:34:36 2025
ISSN: ESSN 1552-4469
PubMed: 28945234
DOI: 10.1038/NCHEMBIO.2475
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