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Fluorine in PDB 5ezr: Crystal Structure of PVX_084705 Bound to Compound

Protein crystallography data

The structure of Crystal Structure of PVX_084705 Bound to Compound, PDB code: 5ezr was solved by M.El Bakkouri, M.Amani, J.R.Walker, S.Osborne, J.M.Large, K.Birchall, N.Bouloc, E.Smiljanic-Hurley, M.Wheldon, D.J.Harding, A.T.Merritt, K.H.Ansell, P.J.Coombs, C.A.Kettleborough, B.L.Stewart, P.W.Bowyer, W.E.Gutteridge, C.H.Arrowsmith, A.M.Edwards, C.Bountra, D.A.Baker, R.Hui, P.Loppnau, Structural Genomics Consortium (Sgc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 2.50
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 191.103, 117.967, 68.162, 90.00, 95.17, 90.00
R / Rfree (%) 22.5 / 26.6

Other elements in 5ezr:

The structure of Crystal Structure of PVX_084705 Bound to Compound also contains other interesting chemical elements:

Chlorine (Cl) 1 atom

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Crystal Structure of PVX_084705 Bound to Compound (pdb code 5ezr). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total only one binding site of Fluorine was determined in the Crystal Structure of PVX_084705 Bound to Compound, PDB code: 5ezr:

Fluorine binding site 1 out of 1 in 5ezr

Go back to Fluorine Binding Sites List in 5ezr
Fluorine binding site 1 out of 1 in the Crystal Structure of PVX_084705 Bound to Compound


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Crystal Structure of PVX_084705 Bound to Compound within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F901

b:67.9
occ:1.00
FAG A:4ZS901 0.0 67.9 1.0
CAY A:4ZS901 1.4 63.0 1.0
CBC A:4ZS901 2.4 62.4 1.0
CAJ A:4ZS901 2.4 61.3 1.0
NAV A:4ZS901 2.7 65.0 1.0
CG2 A:THR611 3.1 64.6 1.0
CB A:PHE609 3.2 86.6 1.0
CAD A:4ZS901 3.2 67.4 1.0
SBK A:4ZS901 3.6 67.2 1.0
CAL A:4ZS901 3.7 62.1 1.0
CAK A:4ZS901 3.7 61.1 1.0
O A:PHE609 3.9 79.1 1.0
CG A:PHE609 4.0 87.2 1.0
CD A:LYS563 4.0 92.8 1.0
CB A:LYS563 4.0 93.0 1.0
CAZ A:4ZS901 4.2 60.7 1.0
C A:PHE609 4.2 82.8 1.0
CA A:PHE609 4.3 87.9 1.0
OAF A:4ZS901 4.4 70.7 1.0
CB A:THR611 4.5 64.8 1.0
CD1 A:PHE609 4.6 88.4 1.0
CD1 A:LEU597 4.6 79.7 1.0
CG A:LYS563 4.6 92.5 1.0
OG1 A:THR611 4.7 61.0 1.0
CD2 A:PHE609 4.7 87.1 1.0
OAE A:4ZS901 4.8 62.6 1.0

Reference:

M.El Bakkouri, M.Amani, J.R.Walker, S.Osborne, J.M.Large, K.Birchall, N.Bouloc, E.Smiljanic-Hurley, M.Wheldon, D.J.Harding, A.T.Merritt, K.H.Ansell, P.J.Coombs, C.A.Kettleborough, B.L.Stewart, P.W.Bowyer, W.E.Gutteridge, C.H.Arrowsmith, A.M.Edwards, C.Bountra, D.A.Baker, R.Hui, P.Loppnau. Crystal Structure of PVX_084705 Bound to Compound To Be Published.
Page generated: Tue Jul 15 03:26:00 2025

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