Fluorine in PDB 5ifd: Crystal Structure of Polymerase Acid Protein (Pa) From Influenza A Virus, Wilson-Smith/1933 (H1N1) Bound to Follow on Fragment Ebsi-4721 1-(4-Fluorophenyl)-1H-Imidazole

The structure of Crystal Structure of Polymerase Acid Protein (Pa) From Influenza A Virus, Wilson-Smith/1933 (H1N1) Bound to Follow on Fragment Ebsi-4721 1-(4-Fluorophenyl)-1H-Imidazole, PDB code: 5ifd was solved by Seattle Structural Genomics Center For Infectious Disease (Ssgcid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	47.78 / 2.65
Space group	P 65 2 2
Cell size a, b, c (Å), α, β, γ (°)	69.030, 69.030, 397.390, 90.00, 90.00, 120.00
R / Rfree (%)	17.5 / 22.6

The binding sites of Fluorine atom in the Crystal Structure of Polymerase Acid Protein (Pa) From Influenza A Virus, Wilson-Smith/1933 (H1N1) Bound to Follow on Fragment Ebsi-4721 1-(4-Fluorophenyl)-1H-Imidazole (pdb code 5ifd). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total only one binding site of Fluorine was determined in the Crystal Structure of Polymerase Acid Protein (Pa) From Influenza A Virus, Wilson-Smith/1933 (H1N1) Bound to Follow on Fragment Ebsi-4721 1-(4-Fluorophenyl)-1H-Imidazole, PDB code: 5ifd:

Fluorine binding site 1 out of 1 in the Crystal Structure of Polymerase Acid Protein (Pa) From Influenza A Virus, Wilson-Smith/1933 (H1N1) Bound to Follow on Fragment Ebsi-4721 1-(4-Fluorophenyl)-1H-Imidazole


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Crystal Structure of Polymerase Acid Protein (Pa) From Influenza A Virus, Wilson-Smith/1933 (H1N1) Bound to Follow on Fragment Ebsi-4721 1-(4-Fluorophenyl)-1H-Imidazole within 5.0Å range: probe atom residue distance (Å) B Occ A:F801 b:77.0 occ:1.00 F01 A:6AQ801 0.0 77.0 1.0 C02 A:6AQ801 1.4 77.2 1.0 C03 A:6AQ801 2.4 80.7 1.0 C07 A:6AQ801 2.4 79.7 1.0 CB A:MET311 3.2 39.7 1.0 OE2 A:GLU349 3.6 91.5 1.0 C04 A:6AQ801 3.6 87.4 1.0 C06 A:6AQ801 3.6 87.6 1.0 CG A:MET311 4.0 30.0 1.0 C05 A:6AQ801 4.1 92.4 1.0 C A:MET311 4.4 38.9 1.0 CA A:MET311 4.4 35.2 1.0 O A:ILE308 4.4 36.3 1.0 CB A:LEU345 4.5 32.7 1.0 N A:ARG312 4.5 42.9 1.0 CE A:MET311 4.5 29.6 1.0 CG2 A:ILE308 4.5 43.5 1.0 CD A:GLU349 4.6 93.8 1.0 CD1 A:LEU345 4.7 29.7 1.0 CG A:ARG312 4.7 61.4 1.0 O A:MET311 4.8 47.3 1.0 CA A:ILE308 4.9 42.9 1.0

P.Pierce, M.M.Muruthi, J.Abendroth, S.O.Moen, D.W.Begley, D.R.Davies, V.M.Marathias, B.L.Staker, P.J.Myler, D.D.Lorimer, T.E.Edwards. Fragment Screening By Std uc(Nmr) Identifies Novel Site Binders Against Influenza A Virus Polymerase Pa To Be Published.