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Fluorine in PDB 5kuh: GLUK2EM with LY466195

Fluorine Binding Sites:

The binding sites of Fluorine atom in the GLUK2EM with LY466195 (pdb code 5kuh). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total 8 binding sites of Fluorine where determined in the GLUK2EM with LY466195, PDB code: 5kuh:
Jump to Fluorine binding site number: 1; 2; 3; 4; 5; 6; 7; 8;

Fluorine binding site 1 out of 8 in 5kuh

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Fluorine binding site 1 out of 8 in the GLUK2EM with LY466195


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of GLUK2EM with LY466195 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F901

b:99.0
occ:1.00
F2 A:LY5901 0.0 99.0 1.0
C15 A:LY5901 1.3 99.0 1.0
F1 A:LY5901 2.0 99.0 1.0
C14 A:LY5901 2.3 99.0 1.0
C16 A:LY5901 2.3 99.0 1.0
C12 A:LY5901 3.1 99.0 1.0
N2 A:LY5901 3.3 99.0 1.0
CB A:VAL654 4.2 99.0 1.0
CB A:SER690 4.3 99.0 1.0
C11 A:LY5901 4.4 99.0 1.0
N A:SER690 4.5 99.0 1.0
C13 A:LY5901 4.5 99.0 1.0
CA A:SER690 4.8 99.0 1.0

Fluorine binding site 2 out of 8 in 5kuh

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Fluorine binding site 2 out of 8 in the GLUK2EM with LY466195


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 2 of GLUK2EM with LY466195 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F901

b:99.0
occ:1.00
F1 A:LY5901 0.0 99.0 1.0
C15 A:LY5901 1.3 99.0 1.0
F2 A:LY5901 2.0 99.0 1.0
C16 A:LY5901 2.4 99.0 1.0
C14 A:LY5901 2.5 99.0 1.0
N2 A:LY5901 3.4 99.0 1.0
C12 A:LY5901 3.6 99.0 1.0
CA A:GLY657 4.5 99.0 1.0
C13 A:LY5901 4.7 99.0 1.0
C11 A:LY5901 4.7 99.0 1.0
CB A:VAL654 4.8 99.0 1.0
O3 A:LY5901 4.8 99.0 1.0

Fluorine binding site 3 out of 8 in 5kuh

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Fluorine binding site 3 out of 8 in the GLUK2EM with LY466195


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 3 of GLUK2EM with LY466195 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:F901

b:99.0
occ:1.00
F2 B:LY5901 0.0 99.0 1.0
C15 B:LY5901 1.3 99.0 1.0
F1 B:LY5901 2.0 99.0 1.0
C14 B:LY5901 2.3 99.0 1.0
C16 B:LY5901 2.3 99.0 1.0
C12 B:LY5901 3.1 99.0 1.0
N2 B:LY5901 3.3 99.0 1.0
CB B:VAL654 4.2 99.0 1.0
CB B:SER690 4.3 99.0 1.0
C11 B:LY5901 4.4 99.0 1.0
N B:SER690 4.5 99.0 1.0
C13 B:LY5901 4.5 99.0 1.0
CA B:SER690 4.8 99.0 1.0

Fluorine binding site 4 out of 8 in 5kuh

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Fluorine binding site 4 out of 8 in the GLUK2EM with LY466195


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 4 of GLUK2EM with LY466195 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:F901

b:99.0
occ:1.00
F1 B:LY5901 0.0 99.0 1.0
C15 B:LY5901 1.3 99.0 1.0
F2 B:LY5901 2.0 99.0 1.0
C16 B:LY5901 2.4 99.0 1.0
C14 B:LY5901 2.5 99.0 1.0
N2 B:LY5901 3.4 99.0 1.0
C12 B:LY5901 3.6 99.0 1.0
CA B:GLY657 4.5 99.0 1.0
C13 B:LY5901 4.7 99.0 1.0
C11 B:LY5901 4.7 99.0 1.0
CB B:VAL654 4.8 99.0 1.0
O3 B:LY5901 4.8 99.0 1.0

Fluorine binding site 5 out of 8 in 5kuh

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Fluorine binding site 5 out of 8 in the GLUK2EM with LY466195


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 5 of GLUK2EM with LY466195 within 5.0Å range:
probe atom residue distance (Å) B Occ
C:F901

b:99.0
occ:1.00
F2 C:LY5901 0.0 99.0 1.0
C15 C:LY5901 1.3 99.0 1.0
F1 C:LY5901 2.0 99.0 1.0
C14 C:LY5901 2.3 99.0 1.0
C16 C:LY5901 2.3 99.0 1.0
C12 C:LY5901 3.1 99.0 1.0
N2 C:LY5901 3.3 99.0 1.0
CB C:VAL654 4.2 99.0 1.0
CB C:SER690 4.3 99.0 1.0
C11 C:LY5901 4.4 99.0 1.0
N C:SER690 4.5 99.0 1.0
C13 C:LY5901 4.5 99.0 1.0
CA C:SER690 4.8 99.0 1.0

Fluorine binding site 6 out of 8 in 5kuh

Go back to Fluorine Binding Sites List in 5kuh
Fluorine binding site 6 out of 8 in the GLUK2EM with LY466195


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 6 of GLUK2EM with LY466195 within 5.0Å range:
probe atom residue distance (Å) B Occ
C:F901

b:99.0
occ:1.00
F1 C:LY5901 0.0 99.0 1.0
C15 C:LY5901 1.3 99.0 1.0
F2 C:LY5901 2.0 99.0 1.0
C16 C:LY5901 2.4 99.0 1.0
C14 C:LY5901 2.5 99.0 1.0
N2 C:LY5901 3.4 99.0 1.0
C12 C:LY5901 3.6 99.0 1.0
CA C:GLY657 4.5 99.0 1.0
C13 C:LY5901 4.7 99.0 1.0
C11 C:LY5901 4.7 99.0 1.0
CB C:VAL654 4.8 99.0 1.0
O3 C:LY5901 4.8 99.0 1.0

Fluorine binding site 7 out of 8 in 5kuh

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Fluorine binding site 7 out of 8 in the GLUK2EM with LY466195


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 7 of GLUK2EM with LY466195 within 5.0Å range:
probe atom residue distance (Å) B Occ
D:F901

b:99.0
occ:1.00
F2 D:LY5901 0.0 99.0 1.0
C15 D:LY5901 1.3 99.0 1.0
F1 D:LY5901 2.0 99.0 1.0
C14 D:LY5901 2.3 99.0 1.0
C16 D:LY5901 2.3 99.0 1.0
C12 D:LY5901 3.1 99.0 1.0
N2 D:LY5901 3.3 99.0 1.0
CB D:VAL654 4.2 99.0 1.0
CB D:SER690 4.3 99.0 1.0
C11 D:LY5901 4.4 99.0 1.0
N D:SER690 4.5 99.0 1.0
C13 D:LY5901 4.5 99.0 1.0
CA D:SER690 4.8 99.0 1.0

Fluorine binding site 8 out of 8 in 5kuh

Go back to Fluorine Binding Sites List in 5kuh
Fluorine binding site 8 out of 8 in the GLUK2EM with LY466195


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 8 of GLUK2EM with LY466195 within 5.0Å range:
probe atom residue distance (Å) B Occ
D:F901

b:99.0
occ:1.00
F1 D:LY5901 0.0 99.0 1.0
C15 D:LY5901 1.3 99.0 1.0
F2 D:LY5901 2.0 99.0 1.0
C16 D:LY5901 2.4 99.0 1.0
C14 D:LY5901 2.5 99.0 1.0
N2 D:LY5901 3.4 99.0 1.0
C12 D:LY5901 3.6 99.0 1.0
CA D:GLY657 4.5 99.0 1.0
C13 D:LY5901 4.7 99.0 1.0
C11 D:LY5901 4.7 99.0 1.0
CB D:VAL654 4.8 99.0 1.0
O3 D:LY5901 4.8 99.0 1.0

Reference:

J.R.Meyerson, S.Chittori, A.Merk, P.Rao, T.H.Han, M.Serpe, M.L.Mayer, S.Subramaniam. Structural Basis of Kainate Subtype Glutamate Receptor Desensitization. Nature V. 537 567 2016.
ISSN: ESSN 1476-4687
PubMed: 27580033
DOI: 10.1038/NATURE19352
Page generated: Tue Jul 15 04:54:13 2025

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