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Fluorine in PDB 5pzo: Crystal Structure of the Hepatitis C Virus NS5B Rna-Dependent Rna Polymerase C316N in Complex with 2-(4-Fluorophenyl)-N-Methyl-5-[3- ({2-Methyl-1-Oxo-1-[(1,3,4-Thiadiazol-2-Yl)Amino]Propan-2- Yl}Carbamoyl)Phenyl]-1-Benzofuran-3-Carboxamide
Enzymatic activity of Crystal Structure of the Hepatitis C Virus NS5B Rna-Dependent Rna Polymerase C316N in Complex with 2-(4-Fluorophenyl)-N-Methyl-5-[3- ({2-Methyl-1-Oxo-1-[(1,3,4-Thiadiazol-2-Yl)Amino]Propan-2- Yl}Carbamoyl)Phenyl]-1-Benzofuran-3-Carboxamide
All present enzymatic activity of Crystal Structure of the Hepatitis C Virus NS5B Rna-Dependent Rna Polymerase C316N in Complex with 2-(4-Fluorophenyl)-N-Methyl-5-[3- ({2-Methyl-1-Oxo-1-[(1,3,4-Thiadiazol-2-Yl)Amino]Propan-2- Yl}Carbamoyl)Phenyl]-1-Benzofuran-3-Carboxamide:
2.7.7.48;
2.7.7.48;
Protein crystallography data
The structure of Crystal Structure of the Hepatitis C Virus NS5B Rna-Dependent Rna Polymerase C316N in Complex with 2-(4-Fluorophenyl)-N-Methyl-5-[3- ({2-Methyl-1-Oxo-1-[(1,3,4-Thiadiazol-2-Yl)Amino]Propan-2- Yl}Carbamoyl)Phenyl]-1-Benzofuran-3-Carboxamide, PDB code: 5pzo
was solved by
S.Sheriff,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 49.23 / 2.80 |
| Space group | P 21 21 21 |
| Cell size a, b, c (Å), α, β, γ (°) | 65.200, 90.300, 234.900, 90.00, 90.00, 90.00 |
| R / Rfree (%) | 20 / 24.3 |
Fluorine Binding Sites:
The binding sites of Fluorine atom in the Crystal Structure of the Hepatitis C Virus NS5B Rna-Dependent Rna Polymerase C316N in Complex with 2-(4-Fluorophenyl)-N-Methyl-5-[3- ({2-Methyl-1-Oxo-1-[(1,3,4-Thiadiazol-2-Yl)Amino]Propan-2- Yl}Carbamoyl)Phenyl]-1-Benzofuran-3-Carboxamide
(pdb code 5pzo). This binding sites where shown within
5.0 Angstroms radius around Fluorine atom.
In total 2 binding sites of Fluorine where determined in the Crystal Structure of the Hepatitis C Virus NS5B Rna-Dependent Rna Polymerase C316N in Complex with 2-(4-Fluorophenyl)-N-Methyl-5-[3- ({2-Methyl-1-Oxo-1-[(1,3,4-Thiadiazol-2-Yl)Amino]Propan-2- Yl}Carbamoyl)Phenyl]-1-Benzofuran-3-Carboxamide, PDB code: 5pzo:
Jump to Fluorine binding site number: 1; 2;
In total 2 binding sites of Fluorine where determined in the Crystal Structure of the Hepatitis C Virus NS5B Rna-Dependent Rna Polymerase C316N in Complex with 2-(4-Fluorophenyl)-N-Methyl-5-[3- ({2-Methyl-1-Oxo-1-[(1,3,4-Thiadiazol-2-Yl)Amino]Propan-2- Yl}Carbamoyl)Phenyl]-1-Benzofuran-3-Carboxamide, PDB code: 5pzo:
Jump to Fluorine binding site number: 1; 2;
Fluorine binding site 1 out of 2 in 5pzo
Go back to
Fluorine Binding Sites List in 5pzo
Fluorine binding site 1 out
of 2 in the Crystal Structure of the Hepatitis C Virus NS5B Rna-Dependent Rna Polymerase C316N in Complex with 2-(4-Fluorophenyl)-N-Methyl-5-[3- ({2-Methyl-1-Oxo-1-[(1,3,4-Thiadiazol-2-Yl)Amino]Propan-2- Yl}Carbamoyl)Phenyl]-1-Benzofuran-3-Carboxamide
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Fluorine with other atoms in the F binding
site number 1 of Crystal Structure of the Hepatitis C Virus NS5B Rna-Dependent Rna Polymerase C316N in Complex with 2-(4-Fluorophenyl)-N-Methyl-5-[3- ({2-Methyl-1-Oxo-1-[(1,3,4-Thiadiazol-2-Yl)Amino]Propan-2- Yl}Carbamoyl)Phenyl]-1-Benzofuran-3-Carboxamide within 5.0Å range:
|
Fluorine binding site 2 out of 2 in 5pzo
Go back to
Fluorine Binding Sites List in 5pzo
Fluorine binding site 2 out
of 2 in the Crystal Structure of the Hepatitis C Virus NS5B Rna-Dependent Rna Polymerase C316N in Complex with 2-(4-Fluorophenyl)-N-Methyl-5-[3- ({2-Methyl-1-Oxo-1-[(1,3,4-Thiadiazol-2-Yl)Amino]Propan-2- Yl}Carbamoyl)Phenyl]-1-Benzofuran-3-Carboxamide
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Fluorine with other atoms in the F binding
site number 2 of Crystal Structure of the Hepatitis C Virus NS5B Rna-Dependent Rna Polymerase C316N in Complex with 2-(4-Fluorophenyl)-N-Methyl-5-[3- ({2-Methyl-1-Oxo-1-[(1,3,4-Thiadiazol-2-Yl)Amino]Propan-2- Yl}Carbamoyl)Phenyl]-1-Benzofuran-3-Carboxamide within 5.0Å range:
|
Reference:
K.S.Yeung,
B.R.Beno,
K.Parcella,
J.A.Bender,
K.A.Grant-Young,
A.Nickel,
P.Gunaga,
P.Anjanappa,
R.O.Bora,
K.Selvakumar,
K.Rigat,
Y.K.Wang,
M.Liu,
J.Lemm,
K.Mosure,
S.Sheriff,
C.Wan,
M.Witmer,
K.Kish,
U.Hanumegowda,
X.Zhuo,
Y.Z.Shu,
D.Parker,
R.Haskell,
A.Ng,
Q.Gao,
E.Colston,
J.Raybon,
D.M.Grasela,
K.Santone,
M.Gao,
N.A.Meanwell,
M.Sinz,
M.G.Soars,
J.O.Knipe,
S.B.Roberts,
J.F.Kadow.
Discovery of A Hepatitis C Virus NS5B Replicase Palm Site Allosteric Inhibitor (Bms-929075) Advanced to Phase 1 Clinical Studies. J. Med. Chem. V. 60 4369 2017.
ISSN: ISSN 1520-4804
PubMed: 28430437
DOI: 10.1021/ACS.JMEDCHEM.7B00328
Page generated: Tue Jul 15 06:04:23 2025
ISSN: ISSN 1520-4804
PubMed: 28430437
DOI: 10.1021/ACS.JMEDCHEM.7B00328
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