Atomistry » Fluorine » PDB 5qou-5qtr » 5qsh
Atomistry »
  Fluorine »
    PDB 5qou-5qtr »
      5qsh »

Fluorine in PDB 5qsh: Pandda Analysis Group Deposition -- Crystal Structure of Human Brachyury G177D Variant in Complex with Z2856434868

Protein crystallography data

The structure of Pandda Analysis Group Deposition -- Crystal Structure of Human Brachyury G177D Variant in Complex with Z2856434868, PDB code: 5qsh was solved by J.A.Newman, A.E.Gavard, L.Sherestha, N.A.Burgess-Brown, F.Von Delft, C.H.Arrowsmith, A.Edwards, C.Bountra, O.Gileadi, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 49.69 / 1.90
Space group H 3 2
Cell size a, b, c (Å), α, β, γ (°) 99.380, 99.380, 99.290, 90.00, 90.00, 120.00
R / Rfree (%) 19.1 / 25.3

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Pandda Analysis Group Deposition -- Crystal Structure of Human Brachyury G177D Variant in Complex with Z2856434868 (pdb code 5qsh). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total only one binding site of Fluorine was determined in the Pandda Analysis Group Deposition -- Crystal Structure of Human Brachyury G177D Variant in Complex with Z2856434868, PDB code: 5qsh:

Fluorine binding site 1 out of 1 in 5qsh

Go back to Fluorine Binding Sites List in 5qsh
Fluorine binding site 1 out of 1 in the Pandda Analysis Group Deposition -- Crystal Structure of Human Brachyury G177D Variant in Complex with Z2856434868


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Pandda Analysis Group Deposition -- Crystal Structure of Human Brachyury G177D Variant in Complex with Z2856434868 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F301

b:76.0
occ:0.40
F1 A:NVY301 0.0 76.0 0.4
C13 A:NVY301 1.2 31.8 0.4
C12 A:NVY301 2.2 39.0 0.4
C8 A:NVY301 2.3 48.6 0.4
N2 A:NVY301 2.6 49.4 0.4
C11 A:NVY301 3.4 44.7 0.4
C9 A:NVY301 3.4 53.5 0.4
CG A:GLU48 3.5 29.6 1.0
CD A:GLU48 3.6 31.4 1.0
C10 A:NVY301 3.8 48.2 0.4
CB A:GLU48 3.8 27.8 1.0
OE2 A:GLU48 3.9 38.9 1.0
C5 A:NVY301 4.0 49.8 0.4
OE1 A:GLU48 4.2 33.5 1.0
CB A:LEU51 4.2 27.0 1.0
CA A:GLU48 4.4 27.2 1.0
CD2 A:LEU51 4.5 30.1 1.0
C6 A:NVY301 4.6 49.1 0.4
C4 A:NVY301 4.9 50.0 0.4
CG A:LEU51 4.9 27.8 1.0

Reference:

J.A.Newman, A.E.Gavard, L.Sherestha, N.A.Burgess-Brown, F.Von Delft, C.H.Arrowsmith, A.Edwards, C.Bountra, O.Gileadi. Pandda Analysis Group Deposition To Be Published.
Page generated: Tue Jul 15 06:31:12 2025

Last articles

Zn in 3RTF
Zn in 3RQZ
Zn in 3RTS
Zn in 3RTO
Zn in 3RT8
Zn in 3RT6
Zn in 3RSN
Zn in 3RSM
Zn in 3RQP
Zn in 3RR4
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy