Atomistry » Fluorine » PDB 6c0u-6cr2 » 6c2n
Atomistry »
  Fluorine »
    PDB 6c0u-6cr2 »
      6c2n »

Fluorine in PDB 6c2n: Crystal Structure of Hcv NS3/4A Double Mutant Variant Y56H/D168A in Complex with Danoprevir

Protein crystallography data

The structure of Crystal Structure of Hcv NS3/4A Double Mutant Variant Y56H/D168A in Complex with Danoprevir, PDB code: 6c2n was solved by A.N.Matthew, C.A.Schiffer, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 27.68 / 1.80
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 59.964, 55.355, 58.891, 90.00, 90.00, 90.00
R / Rfree (%) 16.2 / 19

Other elements in 6c2n:

The structure of Crystal Structure of Hcv NS3/4A Double Mutant Variant Y56H/D168A in Complex with Danoprevir also contains other interesting chemical elements:

Zinc (Zn) 1 atom

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Crystal Structure of Hcv NS3/4A Double Mutant Variant Y56H/D168A in Complex with Danoprevir (pdb code 6c2n). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total only one binding site of Fluorine was determined in the Crystal Structure of Hcv NS3/4A Double Mutant Variant Y56H/D168A in Complex with Danoprevir, PDB code: 6c2n:

Fluorine binding site 1 out of 1 in 6c2n

Go back to Fluorine Binding Sites List in 6c2n
Fluorine binding site 1 out of 1 in the Crystal Structure of Hcv NS3/4A Double Mutant Variant Y56H/D168A in Complex with Danoprevir


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Crystal Structure of Hcv NS3/4A Double Mutant Variant Y56H/D168A in Complex with Danoprevir within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F1203

b:39.2
occ:1.00
F1 A:TSV1203 0.0 39.2 1.0
C21 A:TSV1203 1.4 31.9 1.0
C17 A:TSV1203 2.5 31.3 1.0
C26 A:TSV1203 2.6 32.9 1.0
O A:HOH1497 2.7 35.8 1.0
H17 A:TSV1203 2.7 37.5 1.0
H6 A:TSV1203 2.9 34.2 1.0
HG2 A:ARG1155 2.9 23.4 1.0
HE A:ARG1155 3.0 31.6 1.0
HD2 A:ARG1155 3.2 24.6 1.0
NE A:ARG1155 3.2 26.3 1.0
C31 A:TSV1203 3.3 30.6 1.0
HB3 A:ALA1156 3.4 14.6 1.0
H6A A:TSV1203 3.4 34.2 1.0
C6 A:TSV1203 3.4 28.5 1.0
H31 A:TSV1203 3.5 36.8 1.0
H6B A:TSV1203 3.5 34.2 1.0
CD A:ARG1155 3.5 20.5 1.0
HB2 A:ALA1156 3.5 14.6 1.0
CG A:ARG1155 3.6 19.5 1.0
CB A:ALA1156 3.9 12.2 1.0
C14 A:TSV1203 3.9 24.7 1.0
C24 A:TSV1203 3.9 29.6 1.0
HB3 A:ALA1168 4.0 17.1 1.0
CZ A:ARG1155 4.1 32.5 1.0
HB1 A:ALA1168 4.1 17.1 1.0
HG3 A:ARG1155 4.2 23.4 1.0
HH11 A:ARG1155 4.3 35.4 1.0
HB1 A:ALA1156 4.3 14.6 1.0
HB3 A:ARG1155 4.4 20.6 1.0
HD3 A:ARG1155 4.5 24.6 1.0
C16 A:TSV1203 4.5 25.7 1.0
CB A:ALA1168 4.5 14.3 1.0
NH1 A:ARG1155 4.5 29.5 1.0
N4 A:TSV1203 4.6 26.8 1.0
H14 A:TSV1203 4.7 29.7 1.0
CB A:ARG1155 4.7 17.1 1.0
HB2 A:ALA1168 4.8 17.1 1.0
H8A A:TSV1203 4.9 38.0 1.0
C9 A:TSV1203 4.9 24.1 1.0
C12 A:TSV1203 4.9 28.5 1.0
O A:HOH1367 5.0 23.8 1.0
NH2 A:ARG1155 5.0 28.5 1.0

Reference:

A.N.Matthew, C.A.Schiffer. Clinical Signature Variant of Hcv NS3/4A Protease Uses A Novel Mechanism to Confer Resistance To Be Published.
Page generated: Tue Jul 15 10:19:44 2025

Last articles

Fe in 2YXO
Fe in 2YRS
Fe in 2YXC
Fe in 2YNM
Fe in 2YVJ
Fe in 2YP1
Fe in 2YU2
Fe in 2YU1
Fe in 2YQB
Fe in 2YOO
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy