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Fluorine in PDB 6d6t: Human Gaba-A Receptor ALPHA1-BETA2-GAMMA2 Subtype in Complex with Gaba and Flumazenil, Conformation B

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Human Gaba-A Receptor ALPHA1-BETA2-GAMMA2 Subtype in Complex with Gaba and Flumazenil, Conformation B (pdb code 6d6t). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total only one binding site of Fluorine was determined in the Human Gaba-A Receptor ALPHA1-BETA2-GAMMA2 Subtype in Complex with Gaba and Flumazenil, Conformation B, PDB code: 6d6t:

Fluorine binding site 1 out of 1 in 6d6t

Go back to Fluorine Binding Sites List in 6d6t
Fluorine binding site 1 out of 1 in the Human Gaba-A Receptor ALPHA1-BETA2-GAMMA2 Subtype in Complex with Gaba and Flumazenil, Conformation B


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Human Gaba-A Receptor ALPHA1-BETA2-GAMMA2 Subtype in Complex with Gaba and Flumazenil, Conformation B within 5.0Å range:
probe atom residue distance (Å) B Occ
D:F406

b:1.0
occ:1.00
F21 D:FYP406 0.0 1.0 1.0
C19 D:FYP406 1.4 1.0 1.0
C20 D:FYP406 2.3 1.0 1.0
C18 D:FYP406 2.3 1.0 1.0
NE2 D:HIS102 3.0 19.9 1.0
CB D:TYR210 3.2 20.9 1.0
CG D:TYR210 3.2 20.9 1.0
CD1 D:TYR210 3.5 20.9 1.0
CE1 D:HIS102 3.5 19.9 1.0
C12 D:FYP406 3.6 1.0 1.0
C17 D:FYP406 3.6 1.0 1.0
CD2 D:TYR210 3.8 20.9 1.0
C13 D:FYP406 4.0 1.0 1.0
O D:SER159 4.2 18.1 1.0
CD2 D:HIS102 4.2 19.9 1.0
CE1 D:TYR210 4.3 20.9 1.0
CE2 D:TYR210 4.5 20.9 1.0
CZ D:PHE100 4.6 16.8 1.0
CA D:TYR210 4.7 20.9 1.0
C10 D:FYP406 4.7 1.0 1.0
CZ D:TYR210 4.7 20.9 1.0
CE1 D:PHE100 4.7 16.8 1.0
ND1 D:HIS102 4.8 19.9 1.0
CG2 D:VAL212 4.9 14.7 1.0
O11 D:FYP406 4.9 1.0 1.0
CG1 D:VAL203 4.9 20.7 1.0

Reference:

S.Zhu, C.M.Noviello, J.Teng, R.M.Walsh, J.J.Kim, R.E.Hibbs. Structure of A Human Synaptic Gabaareceptor. Nature V. 559 67 2018.
ISSN: ESSN 1476-4687
PubMed: 29950725
DOI: 10.1038/S41586-018-0255-3
Page generated: Tue Jul 15 10:37:43 2025

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