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Fluorine in PDB 6fo6: Cryoem Structure of Bovine Cytochrome BC1 in Complex with the Anti- Malarial Inhibitor SCR0911

Enzymatic activity of Cryoem Structure of Bovine Cytochrome BC1 in Complex with the Anti- Malarial Inhibitor SCR0911

All present enzymatic activity of Cryoem Structure of Bovine Cytochrome BC1 in Complex with the Anti- Malarial Inhibitor SCR0911:
1.10.2.2;

Other elements in 6fo6:

The structure of Cryoem Structure of Bovine Cytochrome BC1 in Complex with the Anti- Malarial Inhibitor SCR0911 also contains other interesting chemical elements:

Iron (Fe) 6 atoms

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Cryoem Structure of Bovine Cytochrome BC1 in Complex with the Anti- Malarial Inhibitor SCR0911 (pdb code 6fo6). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total 6 binding sites of Fluorine where determined in the Cryoem Structure of Bovine Cytochrome BC1 in Complex with the Anti- Malarial Inhibitor SCR0911, PDB code: 6fo6:
Jump to Fluorine binding site number: 1; 2; 3; 4; 5; 6;

Fluorine binding site 1 out of 6 in 6fo6

Go back to Fluorine Binding Sites List in 6fo6
Fluorine binding site 1 out of 6 in the Cryoem Structure of Bovine Cytochrome BC1 in Complex with the Anti- Malarial Inhibitor SCR0911


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Cryoem Structure of Bovine Cytochrome BC1 in Complex with the Anti- Malarial Inhibitor SCR0911 within 5.0Å range:
probe atom residue distance (Å) B Occ
C:F503

b:5.3
occ:1.00
 F C:DY2503 0.0 5.3 1.0
C22 C:DY2503 1.4 5.3 1.0
F2 C:DY2503 2.2 5.3 1.0
F1 C:DY2503 2.2 5.3 1.0
O2 C:DY2503 2.3 5.3 1.0
C19 C:DY2503 3.3 5.3 1.0
C20 C:DY2503 3.6 5.3 1.0
C18 C:DY2503 4.5 5.3 1.0
C21 C:DY2503 4.9 5.3 1.0

Fluorine binding site 2 out of 6 in 6fo6

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Fluorine binding site 2 out of 6 in the Cryoem Structure of Bovine Cytochrome BC1 in Complex with the Anti- Malarial Inhibitor SCR0911


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 2 of Cryoem Structure of Bovine Cytochrome BC1 in Complex with the Anti- Malarial Inhibitor SCR0911 within 5.0Å range:
probe atom residue distance (Å) B Occ
C:F503

b:5.3
occ:1.00
 F1 C:DY2503 0.0 5.3 1.0
C22 C:DY2503 1.4 5.3 1.0
F2 C:DY2503 2.2 5.3 1.0
F C:DY2503 2.2 5.3 1.0
O2 C:DY2503 2.3 5.3 1.0
C19 C:DY2503 2.6 5.3 1.0
C20 C:DY2503 3.0 5.3 1.0
CD1 C:ILE39 3.0 43.9 1.0
C18 C:DY2503 3.4 5.3 1.0
CB C:ALA232 3.6 43.7 1.0
CG1 C:ILE39 3.8 43.9 1.0
C21 C:DY2503 4.0 5.3 1.0
C17 C:DY2503 4.3 5.3 1.0
C16 C:DY2503 4.5 5.3 1.0
O C:ASP228 4.5 46.5 1.0
CA C:ILE229 4.9 45.6 1.0
CG2 C:ILE39 5.0 43.9 1.0

Fluorine binding site 3 out of 6 in 6fo6

Go back to Fluorine Binding Sites List in 6fo6
Fluorine binding site 3 out of 6 in the Cryoem Structure of Bovine Cytochrome BC1 in Complex with the Anti- Malarial Inhibitor SCR0911


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 3 of Cryoem Structure of Bovine Cytochrome BC1 in Complex with the Anti- Malarial Inhibitor SCR0911 within 5.0Å range:
probe atom residue distance (Å) B Occ
C:F503

b:5.3
occ:1.00
 F2 C:DY2503 0.0 5.3 1.0
C22 C:DY2503 1.4 5.3 1.0
F1 C:DY2503 2.2 5.3 1.0
F C:DY2503 2.2 5.3 1.0
O2 C:DY2503 2.3 5.3 1.0
CG1 C:ILE229 3.3 45.6 1.0
C19 C:DY2503 3.3 5.3 1.0
CA C:ILE229 3.6 45.6 1.0
CB C:ILE229 3.8 45.6 1.0
C18 C:DY2503 4.0 5.3 1.0
CG2 C:ILE229 4.0 45.6 1.0
CB C:ALA232 4.2 43.7 1.0
N C:ILE229 4.3 45.6 1.0
C20 C:DY2503 4.3 5.3 1.0
CD1 C:ILE229 4.4 45.6 1.0
O C:ASP228 4.5 46.5 1.0
C C:ILE229 4.7 45.6 1.0
C C:ASP228 4.7 46.5 1.0
O C:ILE229 4.7 45.6 1.0

Fluorine binding site 4 out of 6 in 6fo6

Go back to Fluorine Binding Sites List in 6fo6
Fluorine binding site 4 out of 6 in the Cryoem Structure of Bovine Cytochrome BC1 in Complex with the Anti- Malarial Inhibitor SCR0911


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 4 of Cryoem Structure of Bovine Cytochrome BC1 in Complex with the Anti- Malarial Inhibitor SCR0911 within 5.0Å range:
probe atom residue distance (Å) B Occ
P:F503

b:24.1
occ:1.00
 F P:DY2503 0.0 24.1 1.0
C22 P:DY2503 1.4 24.1 1.0
F2 P:DY2503 2.2 24.1 1.0
F1 P:DY2503 2.2 24.1 1.0
O2 P:DY2503 2.3 24.1 1.0
C19 P:DY2503 3.2 24.1 1.0
C20 P:DY2503 3.4 24.1 1.0
C18 P:DY2503 4.4 24.1 1.0
C21 P:DY2503 4.7 24.1 1.0
CD1 P:ILE39 4.9 37.5 1.0

Fluorine binding site 5 out of 6 in 6fo6

Go back to Fluorine Binding Sites List in 6fo6
Fluorine binding site 5 out of 6 in the Cryoem Structure of Bovine Cytochrome BC1 in Complex with the Anti- Malarial Inhibitor SCR0911


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 5 of Cryoem Structure of Bovine Cytochrome BC1 in Complex with the Anti- Malarial Inhibitor SCR0911 within 5.0Å range:
probe atom residue distance (Å) B Occ
P:F503

b:24.1
occ:1.00
 F1 P:DY2503 0.0 24.1 1.0
C22 P:DY2503 1.4 24.1 1.0
F2 P:DY2503 2.2 24.1 1.0
F P:DY2503 2.2 24.1 1.0
O2 P:DY2503 2.3 24.1 1.0
C19 P:DY2503 2.6 24.1 1.0
C20 P:DY2503 3.0 24.1 1.0
CD1 P:ILE39 3.1 37.5 1.0
C18 P:DY2503 3.3 24.1 1.0
CB P:ALA232 3.4 37.2 1.0
CG1 P:ILE39 3.9 37.5 1.0
C21 P:DY2503 4.0 24.1 1.0
C17 P:DY2503 4.3 24.1 1.0
O P:ASP228 4.4 39.5 1.0
C16 P:DY2503 4.5 24.1 1.0
CA P:ILE229 4.8 38.7 1.0
C P:ASP228 4.9 39.5 1.0
CA P:ALA232 5.0 37.2 1.0

Fluorine binding site 6 out of 6 in 6fo6

Go back to Fluorine Binding Sites List in 6fo6
Fluorine binding site 6 out of 6 in the Cryoem Structure of Bovine Cytochrome BC1 in Complex with the Anti- Malarial Inhibitor SCR0911


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 6 of Cryoem Structure of Bovine Cytochrome BC1 in Complex with the Anti- Malarial Inhibitor SCR0911 within 5.0Å range:
probe atom residue distance (Å) B Occ
P:F503

b:24.1
occ:1.00
 F2 P:DY2503 0.0 24.1 1.0
C22 P:DY2503 1.4 24.1 1.0
F1 P:DY2503 2.2 24.1 1.0
F P:DY2503 2.2 24.1 1.0
O2 P:DY2503 2.3 24.1 1.0
CG1 P:ILE229 3.4 38.7 1.0
C19 P:DY2503 3.4 24.1 1.0
CA P:ILE229 3.7 38.7 1.0
CB P:ILE229 3.9 38.7 1.0
CG2 P:ILE229 3.9 38.7 1.0
C18 P:DY2503 4.1 24.1 1.0
CB P:ALA232 4.3 37.2 1.0
C20 P:DY2503 4.3 24.1 1.0
N P:ILE229 4.4 38.7 1.0
CD1 P:ILE229 4.4 38.7 1.0
O P:ASP228 4.6 39.5 1.0
O P:ILE229 4.7 38.7 1.0
C P:ILE229 4.7 38.7 1.0
C P:ASP228 4.8 39.5 1.0

Reference:

K.Amporndanai, R.M.Johnson, P.M.O'neill, C.W.G.Fishwick, A.H.Jamson, S.Rawson, S.P.Muench, S.S.Hasnain, S.V.Antonyuk. X-Ray and Cryo-Em Structures of Inhibitor-Bound CYTOCHROMEBC1COMPLEXES For Structure-Based Drug Discovery. Iucrj V. 5 200 2018.
ISSN: ESSN 2052-2525
PubMed: 29765610
DOI: 10.1107/S2052252518001616
Page generated: Thu Aug 1 20:10:00 2024

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