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Fluorine in PDB 6szz: Crystal Structure of Cold Shock Protein B (Cspb) Containing the Modified Residue 4-F-Trp

Protein crystallography data

The structure of Crystal Structure of Cold Shock Protein B (Cspb) Containing the Modified Residue 4-F-Trp, PDB code: 6szz was solved by T.Zhou, O.Mayans, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 39.64 / 2.05
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 56.050, 56.050, 55.120, 90.00, 90.00, 90.00
R / Rfree (%) 20.8 / 23.1

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Crystal Structure of Cold Shock Protein B (Cspb) Containing the Modified Residue 4-F-Trp (pdb code 6szz). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total only one binding site of Fluorine was determined in the Crystal Structure of Cold Shock Protein B (Cspb) Containing the Modified Residue 4-F-Trp, PDB code: 6szz:

Fluorine binding site 1 out of 1 in 6szz

Go back to Fluorine Binding Sites List in 6szz
Fluorine binding site 1 out of 1 in the Crystal Structure of Cold Shock Protein B (Cspb) Containing the Modified Residue 4-F-Trp


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Crystal Structure of Cold Shock Protein B (Cspb) Containing the Modified Residue 4-F-Trp within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F8

b:98.9
occ:1.00
F A:4FW8 0.0 98.9 1.0
CE3 A:4FW8 1.4 90.8 1.0
CZ3 A:4FW8 2.4 78.8 1.0
CD2 A:4FW8 2.4 88.8 1.0
N A:PHE9 2.8 59.1 1.0
C A:PHE9 2.9 76.4 1.0
CA A:PHE9 3.0 64.5 1.0
CG A:4FW8 3.2 91.7 1.0
C A:4FW8 3.2 71.3 1.0
N A:ASN10 3.2 66.9 1.0
CB A:4FW8 3.3 83.2 1.0
O A:PHE9 3.4 90.3 1.0
CH2 A:4FW8 3.7 79.5 1.0
CE2 A:4FW8 3.7 90.3 1.0
O A:4FW8 3.7 64.1 1.0
CA A:4FW8 3.8 75.6 1.0
CA A:ASN10 4.1 75.8 1.0
O A:HOH217 4.1 69.8 1.0
O A:PHE15 4.1 66.2 1.0
CZ2 A:4FW8 4.2 89.7 1.0
CB A:ASN10 4.2 77.7 1.0
CA A:GLY16 4.3 62.2 1.0
CD1 A:4FW8 4.4 92.7 1.0
CB A:PHE9 4.6 54.6 1.0
NE1 A:4FW8 4.7 86.1 1.0
N A:4FW8 4.9 74.8 1.0

Reference:

H.Welte, T.Zhou, X.Mihajlenko, O.Mayans, M.Kovermann. What Does Fluorine Do to A Protein? Thermodynamic, and Highly-Resolved Structural Insights Into Fluorine-Labelled Variants of the Cold Shock Protein. Sci Rep V. 10 2640 2020.
ISSN: ESSN 2045-2322
PubMed: 32060391
DOI: 10.1038/S41598-020-59446-W
Page generated: Fri Aug 2 01:49:03 2024

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