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Fluorine in PDB 6v9v: Structure of TRPA1 Modified By Bodipy-Iodoacetamide with Bound Calcium, Lmng

Other elements in 6v9v:

The structure of Structure of TRPA1 Modified By Bodipy-Iodoacetamide with Bound Calcium, Lmng also contains other interesting chemical elements:

Calcium (Ca) 4 atoms

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Structure of TRPA1 Modified By Bodipy-Iodoacetamide with Bound Calcium, Lmng (pdb code 6v9v). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total 8 binding sites of Fluorine where determined in the Structure of TRPA1 Modified By Bodipy-Iodoacetamide with Bound Calcium, Lmng, PDB code: 6v9v:
Jump to Fluorine binding site number: 1; 2; 3; 4; 5; 6; 7; 8;

Fluorine binding site 1 out of 8 in 6v9v

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Fluorine binding site 1 out of 8 in the Structure of TRPA1 Modified By Bodipy-Iodoacetamide with Bound Calcium, Lmng


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Structure of TRPA1 Modified By Bodipy-Iodoacetamide with Bound Calcium, Lmng within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F1201

b:0.2
occ:1.00
 F27 A:QT41201 0.0 0.2 1.0
B01 A:QT41201 1.7 0.2 1.0
N02 A:QT41201 2.5 0.2 1.0
N11 A:QT41201 2.5 0.2 1.0
F28 A:QT41201 2.8 0.2 1.0
C12 A:QT41201 3.1 0.2 1.0
C07 A:QT41201 3.1 0.2 1.0
C13 A:QT41201 3.3 0.2 1.0
C08 A:QT41201 3.3 0.2 1.0
C03 A:QT41201 3.6 0.2 1.0
C10 A:QT41201 3.6 0.2 1.0
C09 A:QT41201 4.0 0.2 1.0
C25 A:QT41201 4.3 0.2 1.0
C06 A:QT41201 4.3 0.2 1.0
C04 A:QT41201 4.5 0.2 1.0
C26 A:QT41201 4.6 0.2 1.0
CE1 A:PHE612 4.6 0.2 1.0
N14 A:QT41201 4.6 0.2 1.0
C17 A:QT41201 4.7 0.2 1.0
CB A:LYS610 4.8 0.2 1.0
CA A:LYS610 4.9 0.2 1.0
CD2 A:LEU609 4.9 0.9 1.0

Fluorine binding site 2 out of 8 in 6v9v

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Fluorine binding site 2 out of 8 in the Structure of TRPA1 Modified By Bodipy-Iodoacetamide with Bound Calcium, Lmng


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 2 of Structure of TRPA1 Modified By Bodipy-Iodoacetamide with Bound Calcium, Lmng within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F1201

b:0.2
occ:1.00
 F28 A:QT41201 0.0 0.2 1.0
B01 A:QT41201 1.7 0.2 1.0
N11 A:QT41201 2.5 0.2 1.0
N02 A:QT41201 2.5 0.2 1.0
F27 A:QT41201 2.8 0.2 1.0
C12 A:QT41201 3.1 0.2 1.0
C07 A:QT41201 3.2 0.2 1.0
C13 A:QT41201 3.2 0.2 1.0
CD A:PRO666 3.3 0.4 1.0
C08 A:QT41201 3.3 0.2 1.0
C03 A:QT41201 3.6 0.2 1.0
C10 A:QT41201 3.6 0.2 1.0
CG A:PRO666 3.6 0.4 1.0
C09 A:QT41201 4.0 0.2 1.0
C25 A:QT41201 4.3 0.2 1.0
O A:GLN664 4.3 0.8 1.0
C06 A:QT41201 4.4 0.2 1.0
N A:PRO666 4.4 0.4 1.0
N14 A:QT41201 4.5 0.2 1.0
C26 A:QT41201 4.6 0.2 1.0
C04 A:QT41201 4.6 0.2 1.0
CA A:CYS665 4.6 0.7 1.0
C A:CYS665 4.8 0.7 1.0

Fluorine binding site 3 out of 8 in 6v9v

Go back to Fluorine Binding Sites List in 6v9v
Fluorine binding site 3 out of 8 in the Structure of TRPA1 Modified By Bodipy-Iodoacetamide with Bound Calcium, Lmng


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 3 of Structure of TRPA1 Modified By Bodipy-Iodoacetamide with Bound Calcium, Lmng within 5.0Å range:
probe atom residue distance (Å) B Occ
B:F1201

b:0.2
occ:1.00
 F27 B:QT41201 0.0 0.2 1.0
B01 B:QT41201 1.7 0.2 1.0
N02 B:QT41201 2.5 0.2 1.0
N11 B:QT41201 2.5 0.2 1.0
F28 B:QT41201 2.8 0.2 1.0
C12 B:QT41201 3.1 0.2 1.0
C07 B:QT41201 3.1 0.2 1.0
C13 B:QT41201 3.3 0.2 1.0
C08 B:QT41201 3.3 0.2 1.0
C03 B:QT41201 3.6 0.2 1.0
C10 B:QT41201 3.6 0.2 1.0
C09 B:QT41201 4.0 0.2 1.0
C25 B:QT41201 4.3 0.2 1.0
C06 B:QT41201 4.3 0.2 1.0
C04 B:QT41201 4.6 0.2 1.0
C26 B:QT41201 4.6 0.2 1.0
CE1 B:PHE612 4.6 0.2 1.0
N14 B:QT41201 4.6 0.2 1.0
C17 B:QT41201 4.7 0.2 1.0
CB B:LYS610 4.8 0.2 1.0
CA B:LYS610 4.9 0.2 1.0
CD2 B:LEU609 4.9 0.9 1.0

Fluorine binding site 4 out of 8 in 6v9v

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Fluorine binding site 4 out of 8 in the Structure of TRPA1 Modified By Bodipy-Iodoacetamide with Bound Calcium, Lmng


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 4 of Structure of TRPA1 Modified By Bodipy-Iodoacetamide with Bound Calcium, Lmng within 5.0Å range:
probe atom residue distance (Å) B Occ
B:F1201

b:0.2
occ:1.00
 F28 B:QT41201 0.0 0.2 1.0
B01 B:QT41201 1.7 0.2 1.0
N11 B:QT41201 2.5 0.2 1.0
N02 B:QT41201 2.5 0.2 1.0
F27 B:QT41201 2.8 0.2 1.0
C12 B:QT41201 3.1 0.2 1.0
C07 B:QT41201 3.2 0.2 1.0
C13 B:QT41201 3.2 0.2 1.0
CD B:PRO666 3.3 0.4 1.0
C08 B:QT41201 3.3 0.2 1.0
C03 B:QT41201 3.6 0.2 1.0
C10 B:QT41201 3.6 0.2 1.0
CG B:PRO666 3.6 0.4 1.0
C09 B:QT41201 4.0 0.2 1.0
C25 B:QT41201 4.3 0.2 1.0
O B:GLN664 4.3 0.8 1.0
C06 B:QT41201 4.4 0.2 1.0
N B:PRO666 4.4 0.4 1.0
N14 B:QT41201 4.5 0.2 1.0
C26 B:QT41201 4.6 0.2 1.0
C04 B:QT41201 4.6 0.2 1.0
CA B:CYS665 4.6 0.7 1.0
C B:CYS665 4.8 0.7 1.0

Fluorine binding site 5 out of 8 in 6v9v

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Fluorine binding site 5 out of 8 in the Structure of TRPA1 Modified By Bodipy-Iodoacetamide with Bound Calcium, Lmng


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 5 of Structure of TRPA1 Modified By Bodipy-Iodoacetamide with Bound Calcium, Lmng within 5.0Å range:
probe atom residue distance (Å) B Occ
D:F1201

b:0.2
occ:1.00
 F27 D:QT41201 0.0 0.2 1.0
B01 D:QT41201 1.7 0.2 1.0
N02 D:QT41201 2.5 0.2 1.0
N11 D:QT41201 2.5 0.2 1.0
F28 D:QT41201 2.8 0.2 1.0
C12 D:QT41201 3.1 0.2 1.0
C07 D:QT41201 3.1 0.2 1.0
C13 D:QT41201 3.3 0.2 1.0
C08 D:QT41201 3.3 0.2 1.0
C03 D:QT41201 3.6 0.2 1.0
C10 D:QT41201 3.6 0.2 1.0
C09 D:QT41201 4.0 0.2 1.0
C25 D:QT41201 4.3 0.2 1.0
C06 D:QT41201 4.3 0.2 1.0
C04 D:QT41201 4.5 0.2 1.0
C26 D:QT41201 4.6 0.2 1.0
CE1 D:PHE612 4.6 0.2 1.0
N14 D:QT41201 4.6 0.2 1.0
C17 D:QT41201 4.7 0.2 1.0
CB D:LYS610 4.8 0.2 1.0
CA D:LYS610 4.9 0.2 1.0
CD2 D:LEU609 4.9 0.9 1.0

Fluorine binding site 6 out of 8 in 6v9v

Go back to Fluorine Binding Sites List in 6v9v
Fluorine binding site 6 out of 8 in the Structure of TRPA1 Modified By Bodipy-Iodoacetamide with Bound Calcium, Lmng


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 6 of Structure of TRPA1 Modified By Bodipy-Iodoacetamide with Bound Calcium, Lmng within 5.0Å range:
probe atom residue distance (Å) B Occ
D:F1201

b:0.2
occ:1.00
 F28 D:QT41201 0.0 0.2 1.0
B01 D:QT41201 1.7 0.2 1.0
N11 D:QT41201 2.5 0.2 1.0
N02 D:QT41201 2.5 0.2 1.0
F27 D:QT41201 2.8 0.2 1.0
C12 D:QT41201 3.1 0.2 1.0
C07 D:QT41201 3.2 0.2 1.0
C13 D:QT41201 3.2 0.2 1.0
CD D:PRO666 3.3 0.4 1.0
C08 D:QT41201 3.3 0.2 1.0
C03 D:QT41201 3.6 0.2 1.0
C10 D:QT41201 3.6 0.2 1.0
CG D:PRO666 3.6 0.4 1.0
C09 D:QT41201 4.0 0.2 1.0
C25 D:QT41201 4.3 0.2 1.0
O D:GLN664 4.3 0.8 1.0
C06 D:QT41201 4.4 0.2 1.0
N D:PRO666 4.4 0.4 1.0
N14 D:QT41201 4.5 0.2 1.0
C04 D:QT41201 4.6 0.2 1.0
C26 D:QT41201 4.6 0.2 1.0
CA D:CYS665 4.6 0.7 1.0
C D:CYS665 4.8 0.7 1.0

Fluorine binding site 7 out of 8 in 6v9v

Go back to Fluorine Binding Sites List in 6v9v
Fluorine binding site 7 out of 8 in the Structure of TRPA1 Modified By Bodipy-Iodoacetamide with Bound Calcium, Lmng


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 7 of Structure of TRPA1 Modified By Bodipy-Iodoacetamide with Bound Calcium, Lmng within 5.0Å range:
probe atom residue distance (Å) B Occ
C:F1201

b:0.2
occ:1.00
 F27 C:QT41201 0.0 0.2 1.0
B01 C:QT41201 1.7 0.2 1.0
N02 C:QT41201 2.5 0.2 1.0
N11 C:QT41201 2.5 0.2 1.0
F28 C:QT41201 2.8 0.2 1.0
C12 C:QT41201 3.1 0.2 1.0
C07 C:QT41201 3.1 0.2 1.0
C13 C:QT41201 3.3 0.2 1.0
C08 C:QT41201 3.3 0.2 1.0
C03 C:QT41201 3.6 0.2 1.0
C10 C:QT41201 3.6 0.2 1.0
C09 C:QT41201 4.0 0.2 1.0
C25 C:QT41201 4.3 0.2 1.0
C06 C:QT41201 4.3 0.2 1.0
C04 C:QT41201 4.6 0.2 1.0
C26 C:QT41201 4.6 0.2 1.0
CE1 C:PHE612 4.6 0.2 1.0
N14 C:QT41201 4.6 0.2 1.0
C17 C:QT41201 4.7 0.2 1.0
CB C:LYS610 4.8 0.2 1.0
CA C:LYS610 4.9 0.2 1.0
CD2 C:LEU609 4.9 0.9 1.0

Fluorine binding site 8 out of 8 in 6v9v

Go back to Fluorine Binding Sites List in 6v9v
Fluorine binding site 8 out of 8 in the Structure of TRPA1 Modified By Bodipy-Iodoacetamide with Bound Calcium, Lmng


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 8 of Structure of TRPA1 Modified By Bodipy-Iodoacetamide with Bound Calcium, Lmng within 5.0Å range:
probe atom residue distance (Å) B Occ
C:F1201

b:0.2
occ:1.00
 F28 C:QT41201 0.0 0.2 1.0
B01 C:QT41201 1.7 0.2 1.0
N11 C:QT41201 2.5 0.2 1.0
N02 C:QT41201 2.5 0.2 1.0
F27 C:QT41201 2.8 0.2 1.0
C12 C:QT41201 3.1 0.2 1.0
C07 C:QT41201 3.2 0.2 1.0
C13 C:QT41201 3.2 0.2 1.0
CD C:PRO666 3.3 0.4 1.0
C08 C:QT41201 3.3 0.2 1.0
C03 C:QT41201 3.6 0.2 1.0
C10 C:QT41201 3.6 0.2 1.0
CG C:PRO666 3.6 0.4 1.0
C09 C:QT41201 4.0 0.2 1.0
C25 C:QT41201 4.3 0.2 1.0
O C:GLN664 4.3 0.8 1.0
C06 C:QT41201 4.4 0.2 1.0
N C:PRO666 4.4 0.4 1.0
N14 C:QT41201 4.5 0.2 1.0
C26 C:QT41201 4.6 0.2 1.0
C04 C:QT41201 4.6 0.2 1.0
CA C:CYS665 4.6 0.7 1.0
C C:CYS665 4.8 0.7 1.0

Reference:

J.Zhao, J.Zhao. N/A N/A.
Page generated: Tue Jul 15 16:36:10 2025

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