Fluorine in PDB 6yvj: Eed in Complex with A Triazolopyrimidine

The structure of Eed in Complex with A Triazolopyrimidine, PDB code: 6yvj was solved by J.A.Read, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	44.94 / 1.84
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	87.02, 89.87, 99.14, 90, 90, 90
R / Rfree (%)	18.2 / 19.9

The binding sites of Fluorine atom in the Eed in Complex with A Triazolopyrimidine (pdb code 6yvj). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total 2 binding sites of Fluorine where determined in the Eed in Complex with A Triazolopyrimidine, PDB code: 6yvj:
Jump to Fluorine binding site number: 1; 2;

Fluorine binding site 1 out of 2 in the Eed in Complex with A Triazolopyrimidine


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Eed in Complex with A Triazolopyrimidine within 5.0Å range: probe atom residue distance (Å) B Occ B:F502 b:36.4 occ:0.50 F27 B:EJR502 0.0 36.4 0.5 F27 B:EJR502 0.1 25.6 0.5 C23 B:EJR502 1.3 22.7 0.5 C23 B:EJR502 1.4 35.0 0.5 C18 B:EJR502 2.3 21.9 0.5 C22 B:EJR502 2.3 34.0 0.5 C18 B:EJR502 2.3 34.4 0.5 C22 B:EJR502 2.3 20.8 0.5 C17 B:EJR502 2.8 23.9 0.5 C17 B:EJR502 2.9 35.2 0.5 N10 B:EJR502 3.0 24.7 0.5 N10 B:EJR502 3.1 35.4 0.5 O B:LEU240 3.1 26.8 1.0 CB B:ASN194 3.2 24.8 1.0 CG B:ASN194 3.3 34.4 1.0 OD1 B:ASN194 3.4 25.9 1.0 C19 B:EJR502 3.6 20.8 0.5 C21 B:EJR502 3.6 20.6 0.5 C19 B:EJR502 3.6 33.7 0.5 C21 B:EJR502 3.6 33.6 0.5 NH2 B:ARG367 3.7 39.5 1.0 CD1 B:TYR365 3.7 33.5 1.0 O B:ASN194 3.7 24.7 1.0 CE1 B:TYR365 3.9 34.3 1.0 C5 B:EJR502 4.0 26.9 0.5 C B:LEU240 4.0 26.7 1.0 ND2 B:ASN194 4.0 27.1 1.0 CD2 B:LEU240 4.0 37.8 1.0 CA B:LEU240 4.0 24.2 1.0 CA B:ASN194 4.0 23.7 1.0 C20 B:EJR502 4.0 20.0 0.5 C20 B:EJR502 4.1 33.6 0.5 CB B:LEU240 4.1 25.7 1.0 C5 B:EJR502 4.2 36.9 0.5 C B:ASN194 4.2 25.9 1.0 CZ B:ARG367 4.3 60.5 1.0 NH1 B:ARG367 4.5 48.2 1.0 N6 B:EJR502 4.7 26.6 0.5 CG B:LEU240 4.7 32.8 1.0 N4 B:EJR502 4.8 28.2 0.5 N4 B:EJR502 4.9 38.1 0.5 C24 B:EJR502 4.9 21.3 0.5 N6 B:EJR502 4.9 36.7 0.5 CG B:TYR365 5.0 32.7 1.0 C24 B:EJR502 5.0 33.6 0.5 C9 B:EJR502 5.0 27.9 0.5

Fluorine binding site 2 out of 2 in the Eed in Complex with A Triazolopyrimidine


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 2 of Eed in Complex with A Triazolopyrimidine within 5.0Å range: probe atom residue distance (Å) B Occ B:F502 b:25.6 occ:0.50 F27 B:EJR502 0.0 25.6 0.5 F27 B:EJR502 0.1 36.4 0.5 C23 B:EJR502 1.4 22.7 0.5 C23 B:EJR502 1.4 35.0 0.5 C22 B:EJR502 2.3 34.0 0.5 C22 B:EJR502 2.3 20.8 0.5 C18 B:EJR502 2.3 21.9 0.5 C18 B:EJR502 2.4 34.4 0.5 C17 B:EJR502 2.9 23.9 0.5 C17 B:EJR502 2.9 35.2 0.5 N10 B:EJR502 3.0 24.7 0.5 O B:LEU240 3.1 26.8 1.0 N10 B:EJR502 3.1 35.4 0.5 CB B:ASN194 3.2 24.8 1.0 CG B:ASN194 3.3 34.4 1.0 OD1 B:ASN194 3.4 25.9 1.0 C21 B:EJR502 3.6 20.6 0.5 C19 B:EJR502 3.6 20.8 0.5 C21 B:EJR502 3.6 33.6 0.5 NH2 B:ARG367 3.6 39.5 1.0 C19 B:EJR502 3.7 33.7 0.5 O B:ASN194 3.7 24.7 1.0 CD1 B:TYR365 3.8 33.5 1.0 CE1 B:TYR365 3.9 34.3 1.0 C B:LEU240 3.9 26.7 1.0 CA B:LEU240 4.0 24.2 1.0 ND2 B:ASN194 4.0 27.1 1.0 CD2 B:LEU240 4.0 37.8 1.0 CA B:ASN194 4.0 23.7 1.0 CB B:LEU240 4.1 25.7 1.0 C5 B:EJR502 4.1 26.9 0.5 C20 B:EJR502 4.1 20.0 0.5 C20 B:EJR502 4.1 33.6 0.5 C B:ASN194 4.2 25.9 1.0 C5 B:EJR502 4.3 36.9 0.5 CZ B:ARG367 4.3 60.5 1.0 NH1 B:ARG367 4.5 48.2 1.0 CG B:LEU240 4.7 32.8 1.0 N6 B:EJR502 4.7 26.6 0.5 N4 B:EJR502 4.8 28.2 0.5 C24 B:EJR502 5.0 21.3 0.5 N4 B:EJR502 5.0 38.1 0.5

J.A.Read, J.A.Read. N/A N/A.