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Fluorine in PDB 6zra: 17BETA-Hydroxysteroid Dehydrogenase Type 14 Variant S205 in Complex with 2-Fluoro-5-Nitrophenol

Protein crystallography data

The structure of 17BETA-Hydroxysteroid Dehydrogenase Type 14 Variant S205 in Complex with 2-Fluoro-5-Nitrophenol, PDB code: 6zra was solved by M.J.Badran, A.Heine, G.Klebe, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 46.20 / 1.73
Space group I 4 2 2
Cell size a, b, c (Å), α, β, γ (°) 91.15, 91.15, 132.498, 90, 90, 90
R / Rfree (%) 16.7 / 17.7

Other elements in 6zra:

The structure of 17BETA-Hydroxysteroid Dehydrogenase Type 14 Variant S205 in Complex with 2-Fluoro-5-Nitrophenol also contains other interesting chemical elements:

Sodium (Na) 1 atom

Fluorine Binding Sites:

The binding sites of Fluorine atom in the 17BETA-Hydroxysteroid Dehydrogenase Type 14 Variant S205 in Complex with 2-Fluoro-5-Nitrophenol (pdb code 6zra). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total only one binding site of Fluorine was determined in the 17BETA-Hydroxysteroid Dehydrogenase Type 14 Variant S205 in Complex with 2-Fluoro-5-Nitrophenol, PDB code: 6zra:

Fluorine binding site 1 out of 1 in 6zra

Go back to Fluorine Binding Sites List in 6zra
Fluorine binding site 1 out of 1 in the 17BETA-Hydroxysteroid Dehydrogenase Type 14 Variant S205 in Complex with 2-Fluoro-5-Nitrophenol


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of 17BETA-Hydroxysteroid Dehydrogenase Type 14 Variant S205 in Complex with 2-Fluoro-5-Nitrophenol within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F301

b:38.8
occ:0.72
F A:QFT301 0.0 38.8 0.7
C5 A:QFT301 1.4 35.3 0.7
C A:QFT301 2.4 33.8 0.7
C4 A:QFT301 2.4 37.5 0.7
O A:QFT301 2.7 40.4 0.7
CD1 A:TRP192 3.2 26.9 1.0
CG A:TRP192 3.4 26.8 1.0
CD1 A:LEU195 3.4 30.5 1.0
O A:HOH528 3.5 43.9 1.0
NE1 A:TRP192 3.5 22.8 1.0
C3 A:QFT301 3.6 33.0 0.7
C1 A:QFT301 3.6 28.8 0.7
CA A:TRP192 3.7 25.5 1.0
CD2 A:TRP192 3.9 26.4 1.0
O A:HOH505 3.9 48.7 1.0
CE2 A:TRP192 3.9 25.9 1.0
CB A:TRP192 3.9 25.9 1.0
C2 A:QFT301 4.1 33.8 0.7
N A:TRP192 4.2 24.6 1.0
O7N A:NAD303 4.5 23.7 1.0
CG A:LEU195 4.5 32.9 1.0
O A:LEU191 4.6 26.1 1.0
CB A:LEU195 4.7 29.7 1.0
C A:LEU191 4.7 27.6 1.0
C7N A:NAD303 4.8 24.2 1.0
CE3 A:TRP192 4.8 27.1 1.0
N7N A:NAD303 4.8 25.1 1.0
C A:TRP192 4.8 27.8 1.0
CZ2 A:TRP192 4.9 28.6 1.0
CG A:LEU191 4.9 31.2 1.0
O A:TRP192 4.9 26.4 1.0

Reference:

M.J.Badran, A.Heine, G.Klebe. 17BETA-Hydroxysteroid Dehydrogenase Type 14 Variant S205 in Complex with 2-Fluoro-5-Nitrophenol To Be Published.
Page generated: Fri Aug 2 05:26:25 2024

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