Atomistry » Fluorine » PDB 7aym-7biv » 7b3h
Atomistry »
  Fluorine »
    PDB 7aym-7biv »
      7b3h »

Fluorine in PDB 7b3h: Notum Complex with ARUK3003909

Enzymatic activity of Notum Complex with ARUK3003909

All present enzymatic activity of Notum Complex with ARUK3003909:
3.1.1.98;

Protein crystallography data

The structure of Notum Complex with ARUK3003909, PDB code: 7b3h was solved by Y.Zhao, E.Y.Jones, P.Fish, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 46.01 / 1.28
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 59.313, 72.909, 77.993, 90, 90, 90
R / Rfree (%) 19.5 / 20.4

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Notum Complex with ARUK3003909 (pdb code 7b3h). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total 3 binding sites of Fluorine where determined in the Notum Complex with ARUK3003909, PDB code: 7b3h:
Jump to Fluorine binding site number: 1; 2; 3;

Fluorine binding site 1 out of 3 in 7b3h

Go back to Fluorine Binding Sites List in 7b3h
Fluorine binding site 1 out of 3 in the Notum Complex with ARUK3003909


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Notum Complex with ARUK3003909 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F507

b:25.4
occ:1.00
F01 A:SSW507 0.0 25.4 1.0
C02 A:SSW507 1.4 28.5 1.0
F04 A:SSW507 2.2 27.7 1.0
F03 A:SSW507 2.3 29.5 1.0
O05 A:SSW507 2.3 25.4 1.0
C06 A:SSW507 2.7 21.6 1.0
C07 A:SSW507 3.0 19.3 1.0
CB A:PHE268 3.3 14.5 1.0
CE1 A:PHE320 3.4 16.1 1.0
C11 A:SSW507 3.6 21.8 1.0
CG A:PHE268 3.6 14.5 1.0
CZ A:PHE320 3.8 17.9 1.0
CD2 A:PHE268 4.1 15.4 1.0
C08 A:SSW507 4.1 19.2 1.0
CD1 A:PHE268 4.4 18.2 1.0
CD1 A:PHE320 4.4 15.3 1.0
C10 A:SSW507 4.6 21.2 1.0
O A:LEU269 4.6 16.6 1.0
CA A:PHE268 4.7 12.5 1.0
CG2 A:VAL346 4.7 22.5 1.0
C09 A:SSW507 4.8 18.8 1.0
CE2 A:PHE320 4.9 16.6 1.0
CE2 A:PHE268 5.0 18.1 1.0

Fluorine binding site 2 out of 3 in 7b3h

Go back to Fluorine Binding Sites List in 7b3h
Fluorine binding site 2 out of 3 in the Notum Complex with ARUK3003909


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 2 of Notum Complex with ARUK3003909 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F507

b:29.5
occ:1.00
F03 A:SSW507 0.0 29.5 1.0
C02 A:SSW507 1.4 28.5 1.0
F04 A:SSW507 2.2 27.7 1.0
O05 A:SSW507 2.2 25.4 1.0
F01 A:SSW507 2.3 25.4 1.0
C06 A:SSW507 3.5 21.6 1.0
CZ A:PHE320 3.7 17.9 1.0
CE1 A:PHE320 3.9 16.1 1.0
C A:PRO287 4.0 30.6 1.0
CA A:PRO287 4.1 36.3 1.0
O A:HOH606 4.1 28.6 1.0
O A:PRO287 4.3 30.8 1.0
N A:THR288 4.3 31.2 1.0
C07 A:SSW507 4.3 19.3 1.0
C11 A:SSW507 4.5 21.8 1.0
CG2 A:VAL346 4.6 22.5 1.0
CG2 A:THR288 4.6 29.0 1.0
CB A:VAL346 4.8 21.8 1.0
N A:PRO287 4.8 41.9 1.0
CE2 A:PHE320 4.9 16.6 1.0
CA A:THR288 4.9 30.2 1.0
O A:LEU269 4.9 16.6 1.0
CG1 A:VAL346 4.9 22.4 1.0

Fluorine binding site 3 out of 3 in 7b3h

Go back to Fluorine Binding Sites List in 7b3h
Fluorine binding site 3 out of 3 in the Notum Complex with ARUK3003909


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 3 of Notum Complex with ARUK3003909 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F507

b:27.7
occ:1.00
F04 A:SSW507 0.0 27.7 1.0
C02 A:SSW507 1.4 28.5 1.0
F01 A:SSW507 2.2 25.4 1.0
F03 A:SSW507 2.2 29.5 1.0
O05 A:SSW507 2.3 25.4 1.0
C06 A:SSW507 2.9 21.6 1.0
C11 A:SSW507 3.2 21.8 1.0
O A:HOH606 3.2 28.6 1.0
CG1 A:VAL346 3.5 22.4 1.0
C07 A:SSW507 4.0 19.3 1.0
CG2 A:VAL346 4.0 22.5 1.0
CB A:VAL346 4.1 21.8 1.0
C22 A:SSW507 4.4 22.1 1.0
C10 A:SSW507 4.4 21.2 1.0
CZ3 A:TRP128 4.6 23.6 1.0
CA A:PRO287 5.0 36.3 1.0

Reference:

P.Fish, E.Y.Jones. Notum Inhibitor To Be Published.
Page generated: Fri Aug 2 05:55:30 2024

Last articles

Zn in 9MJ5
Zn in 9HNW
Zn in 9G0L
Zn in 9FNE
Zn in 9DZN
Zn in 9E0I
Zn in 9D32
Zn in 9DAK
Zn in 8ZXC
Zn in 8ZUF
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy