Fluorine in PDB 7e1h: Crystal Structure of Rd-Bef
Protein crystallography data
The structure of Crystal Structure of Rd-Bef, PDB code: 7e1h
was solved by
S.Hong,
X.Zhang,
P.Zhang,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
|
Resolution Low / High (Å)
|
29.47 /
2.81
|
|
Space group
|
P 65
|
|
Cell size a, b, c (Å), α, β, γ (°)
|
130.858,
130.858,
271.355,
90,
90,
120
|
|
R / Rfree (%)
|
22.6 /
25.3
|
Other elements in 7e1h:
The structure of Crystal Structure of Rd-Bef also contains other interesting chemical elements:
Fluorine Binding Sites:
The binding sites of Fluorine atom in the Crystal Structure of Rd-Bef
(pdb code 7e1h). This binding sites where shown within
5.0 Angstroms radius around Fluorine atom.
In total 9 binding sites of Fluorine where determined in the
Crystal Structure of Rd-Bef, PDB code: 7e1h:
Jump to Fluorine binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
Fluorine binding site 1 out
of 9 in 7e1h
Go back to
Fluorine Binding Sites List in 7e1h
Fluorine binding site 1 out
of 9 in the Crystal Structure of Rd-Bef
 Mono view
 Stereo pair view
|
|
A full contact list of Fluorine with other atoms in the F binding
site number 1 of Crystal Structure of Rd-Bef within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F201
b:35.1
occ:1.00
|
F1
|
A:BEF201
|
0.0
|
35.1
|
1.0
|
|
BE
|
A:BEF201
|
1.5
|
28.4
|
1.0
|
|
MG
|
A:MG202
|
1.9
|
13.8
|
1.0
|
|
F2
|
A:BEF201
|
2.4
|
18.8
|
1.0
|
|
F3
|
A:BEF201
|
2.6
|
23.7
|
1.0
|
|
OD1
|
A:ASP51
|
2.7
|
36.3
|
1.0
|
|
OD2
|
A:ASP51
|
3.1
|
19.8
|
1.0
|
|
O
|
A:GLN53
|
3.1
|
49.7
|
1.0
|
|
CG
|
A:ASP51
|
3.3
|
25.4
|
1.0
|
|
O
|
I:HOH223
|
3.7
|
39.2
|
1.0
|
|
NH2
|
I:ARG110
|
3.7
|
23.1
|
1.0
|
|
N
|
A:GLN53
|
3.8
|
24.6
|
1.0
|
|
CB
|
A:GLN53
|
3.9
|
33.6
|
1.0
|
|
C
|
A:GLN53
|
3.9
|
44.7
|
1.0
|
|
OD1
|
A:ASP10
|
3.9
|
30.2
|
1.0
|
|
OD2
|
I:ASP96
|
3.9
|
28.8
|
1.0
|
|
OD1
|
I:ASP96
|
4.0
|
32.4
|
1.0
|
|
CA
|
A:GLN53
|
4.0
|
28.0
|
1.0
|
|
OD2
|
A:ASP10
|
4.3
|
29.8
|
1.0
|
|
CG
|
I:ASP96
|
4.4
|
32.0
|
1.0
|
|
OG1
|
A:THR78
|
4.4
|
35.9
|
1.0
|
|
NZ
|
A:LYS100
|
4.4
|
22.1
|
1.0
|
|
CG
|
A:ASP10
|
4.5
|
31.8
|
1.0
|
|
CZ
|
I:ARG110
|
4.7
|
32.5
|
1.0
|
|
OE2
|
A:GLU9
|
4.7
|
34.7
|
1.0
|
|
CB
|
A:ASP51
|
4.8
|
20.1
|
1.0
|
|
N
|
A:ARG52
|
4.8
|
26.5
|
1.0
|
|
C
|
A:ARG52
|
4.9
|
29.0
|
1.0
|
|
N
|
A:ALA79
|
5.0
|
24.7
|
1.0
|
|
Fluorine binding site 2 out
of 9 in 7e1h
Go back to
Fluorine Binding Sites List in 7e1h
Fluorine binding site 2 out
of 9 in the Crystal Structure of Rd-Bef
 Mono view
 Stereo pair view
|
|
A full contact list of Fluorine with other atoms in the F binding
site number 2 of Crystal Structure of Rd-Bef within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F201
b:18.8
occ:1.00
|
F2
|
A:BEF201
|
0.0
|
18.8
|
1.0
|
|
BE
|
A:BEF201
|
1.5
|
28.4
|
1.0
|
|
OD1
|
A:ASP51
|
2.0
|
36.3
|
1.0
|
|
F1
|
A:BEF201
|
2.4
|
35.1
|
1.0
|
|
F3
|
A:BEF201
|
2.5
|
23.7
|
1.0
|
|
NZ
|
A:LYS100
|
2.5
|
22.1
|
1.0
|
|
N
|
A:ALA79
|
3.1
|
24.7
|
1.0
|
|
CG
|
A:ASP51
|
3.2
|
25.4
|
1.0
|
|
OG1
|
A:THR78
|
3.2
|
35.9
|
1.0
|
|
CA
|
A:THR78
|
3.2
|
17.1
|
1.0
|
|
CE
|
A:LYS100
|
3.4
|
27.8
|
1.0
|
|
MG
|
A:MG202
|
3.6
|
13.8
|
1.0
|
|
C
|
A:THR78
|
3.6
|
17.2
|
1.0
|
|
CB
|
A:THR78
|
3.8
|
20.0
|
1.0
|
|
O
|
I:HOH223
|
3.8
|
39.2
|
1.0
|
|
OD2
|
A:ASP51
|
3.8
|
19.8
|
1.0
|
|
CD
|
A:LYS100
|
3.9
|
31.7
|
1.0
|
|
O
|
A:LEU77
|
4.1
|
22.2
|
1.0
|
|
CB
|
A:ALA79
|
4.2
|
21.2
|
1.0
|
|
CA
|
A:ALA79
|
4.2
|
25.9
|
1.0
|
|
CB
|
A:ASP51
|
4.2
|
20.1
|
1.0
|
|
N
|
A:THR78
|
4.4
|
16.5
|
1.0
|
|
OE2
|
A:GLU9
|
4.5
|
34.7
|
1.0
|
|
N
|
A:ARG52
|
4.5
|
26.5
|
1.0
|
|
OD2
|
I:ASP96
|
4.6
|
28.8
|
1.0
|
|
C
|
A:LEU77
|
4.7
|
17.8
|
1.0
|
|
CA
|
A:ASP51
|
4.7
|
20.4
|
1.0
|
|
NH2
|
I:ARG110
|
4.8
|
23.1
|
1.0
|
|
O
|
A:THR78
|
4.8
|
22.2
|
1.0
|
|
N
|
A:GLN53
|
5.0
|
24.6
|
1.0
|
|
OE1
|
A:GLU9
|
5.0
|
47.5
|
1.0
|
|
Fluorine binding site 3 out
of 9 in 7e1h
Go back to
Fluorine Binding Sites List in 7e1h
Fluorine binding site 3 out
of 9 in the Crystal Structure of Rd-Bef
 Mono view
 Stereo pair view
|
|
A full contact list of Fluorine with other atoms in the F binding
site number 3 of Crystal Structure of Rd-Bef within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F201
b:23.7
occ:1.00
|
F3
|
A:BEF201
|
0.0
|
23.7
|
1.0
|
|
BE
|
A:BEF201
|
1.5
|
28.4
|
1.0
|
|
OD1
|
A:ASP51
|
2.1
|
36.3
|
1.0
|
|
OG1
|
A:THR78
|
2.4
|
35.9
|
1.0
|
|
F2
|
A:BEF201
|
2.5
|
18.8
|
1.0
|
|
N
|
A:ARG52
|
2.6
|
26.5
|
1.0
|
|
F1
|
A:BEF201
|
2.6
|
35.1
|
1.0
|
|
N
|
A:GLN53
|
2.6
|
24.6
|
1.0
|
|
CG
|
A:ASP51
|
2.8
|
25.4
|
1.0
|
|
CA
|
A:ARG52
|
3.1
|
25.8
|
1.0
|
|
OD2
|
A:ASP51
|
3.3
|
19.8
|
1.0
|
|
CB
|
A:THR78
|
3.3
|
20.0
|
1.0
|
|
C
|
A:ARG52
|
3.3
|
29.0
|
1.0
|
|
CB
|
A:ARG52
|
3.3
|
25.3
|
1.0
|
|
C
|
A:ASP51
|
3.4
|
20.9
|
1.0
|
|
CA
|
A:GLN53
|
3.7
|
28.0
|
1.0
|
|
MG
|
A:MG202
|
3.8
|
13.8
|
1.0
|
|
CA
|
A:THR78
|
3.8
|
17.1
|
1.0
|
|
CA
|
A:ASP51
|
3.9
|
20.4
|
1.0
|
|
CB
|
A:ASP51
|
4.0
|
20.1
|
1.0
|
|
CB
|
A:GLN53
|
4.0
|
33.6
|
1.0
|
|
O
|
A:GLN53
|
4.2
|
49.7
|
1.0
|
|
C
|
A:GLN53
|
4.2
|
44.7
|
1.0
|
|
N
|
A:ALA79
|
4.3
|
24.7
|
1.0
|
|
O
|
A:ASP51
|
4.3
|
26.5
|
1.0
|
|
O
|
A:ARG52
|
4.5
|
35.5
|
1.0
|
|
CD1
|
A:LEU80
|
4.5
|
23.8
|
1.0
|
|
CG
|
A:ARG52
|
4.5
|
18.0
|
1.0
|
|
CG2
|
A:THR78
|
4.6
|
14.6
|
1.0
|
|
C
|
A:THR78
|
4.6
|
17.2
|
1.0
|
|
O
|
A:LEU77
|
4.7
|
22.2
|
1.0
|
|
NZ
|
A:LYS100
|
4.8
|
22.1
|
1.0
|
|
NH2
|
I:ARG110
|
5.0
|
23.1
|
1.0
|
|
Fluorine binding site 4 out
of 9 in 7e1h
Go back to
Fluorine Binding Sites List in 7e1h
Fluorine binding site 4 out
of 9 in the Crystal Structure of Rd-Bef
 Mono view
 Stereo pair view
|
|
A full contact list of Fluorine with other atoms in the F binding
site number 4 of Crystal Structure of Rd-Bef within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:F201
b:26.4
occ:1.00
|
F1
|
B:BEF201
|
0.0
|
26.4
|
1.0
|
|
BE
|
B:BEF201
|
1.5
|
18.5
|
1.0
|
|
MG
|
B:MG202
|
2.0
|
14.7
|
1.0
|
|
O
|
B:HOH319
|
2.1
|
30.5
|
1.0
|
|
F2
|
B:BEF201
|
2.5
|
13.1
|
1.0
|
|
OD2
|
B:ASP51
|
2.5
|
22.1
|
1.0
|
|
O
|
B:GLN53
|
2.5
|
18.8
|
1.0
|
|
F3
|
B:BEF201
|
2.6
|
26.0
|
1.0
|
|
CG
|
B:ASP51
|
2.8
|
25.6
|
1.0
|
|
OD1
|
B:ASP51
|
2.9
|
26.3
|
1.0
|
|
O
|
J:HOH227
|
3.0
|
13.7
|
1.0
|
|
OE1
|
B:GLU9
|
3.1
|
22.5
|
1.0
|
|
C
|
B:GLN53
|
3.4
|
14.0
|
1.0
|
|
N
|
B:GLN53
|
3.5
|
9.7
|
1.0
|
|
NH2
|
J:ARG110
|
3.8
|
16.8
|
1.0
|
|
CA
|
B:GLN53
|
3.8
|
14.3
|
1.0
|
|
OE2
|
B:GLU9
|
3.8
|
27.2
|
1.0
|
|
CD
|
B:GLU9
|
3.8
|
27.7
|
1.0
|
|
CB
|
B:GLN53
|
3.9
|
12.9
|
1.0
|
|
CB
|
B:ASP51
|
3.9
|
20.4
|
1.0
|
|
OD2
|
B:ASP10
|
4.1
|
23.3
|
1.0
|
|
N
|
B:ARG52
|
4.2
|
9.7
|
1.0
|
|
CD2
|
B:LEU54
|
4.2
|
22.9
|
1.0
|
|
OG1
|
B:THR78
|
4.3
|
25.7
|
1.0
|
|
O
|
J:HOH214
|
4.4
|
26.0
|
1.0
|
|
OE1
|
B:GLN53
|
4.5
|
16.4
|
1.0
|
|
C
|
B:ARG52
|
4.5
|
18.4
|
1.0
|
|
N
|
B:LEU54
|
4.6
|
18.6
|
1.0
|
|
CZ
|
J:ARG110
|
4.8
|
14.8
|
1.0
|
|
CA
|
B:ARG52
|
4.9
|
16.4
|
1.0
|
|
NZ
|
B:LYS100
|
4.9
|
18.3
|
1.0
|
|
CA
|
B:ASP51
|
5.0
|
10.4
|
1.0
|
|
Fluorine binding site 5 out
of 9 in 7e1h
Go back to
Fluorine Binding Sites List in 7e1h
Fluorine binding site 5 out
of 9 in the Crystal Structure of Rd-Bef
 Mono view
 Stereo pair view
|
|
A full contact list of Fluorine with other atoms in the F binding
site number 5 of Crystal Structure of Rd-Bef within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:F201
b:13.1
occ:1.00
|
F2
|
B:BEF201
|
0.0
|
13.1
|
1.0
|
|
BE
|
B:BEF201
|
1.5
|
18.5
|
1.0
|
|
O
|
J:HOH227
|
2.3
|
13.7
|
1.0
|
|
OD1
|
B:ASP51
|
2.3
|
26.3
|
1.0
|
|
OD2
|
B:ASP51
|
2.4
|
22.1
|
1.0
|
|
F1
|
B:BEF201
|
2.5
|
26.4
|
1.0
|
|
F3
|
B:BEF201
|
2.5
|
26.0
|
1.0
|
|
CG
|
B:ASP51
|
2.7
|
25.6
|
1.0
|
|
OG1
|
B:THR78
|
3.0
|
25.7
|
1.0
|
|
O
|
B:HOH319
|
3.0
|
30.5
|
1.0
|
|
N
|
B:ALA79
|
3.2
|
12.6
|
1.0
|
|
CA
|
B:THR78
|
3.3
|
13.6
|
1.0
|
|
CE
|
B:LYS100
|
3.5
|
16.6
|
1.0
|
|
CB
|
B:THR78
|
3.6
|
21.3
|
1.0
|
|
C
|
B:THR78
|
3.6
|
19.3
|
1.0
|
|
NZ
|
B:LYS100
|
3.7
|
18.3
|
1.0
|
|
CB
|
B:ALA79
|
4.1
|
19.7
|
1.0
|
|
O
|
B:LEU77
|
4.2
|
21.6
|
1.0
|
|
CB
|
B:ASP51
|
4.2
|
20.4
|
1.0
|
|
MG
|
B:MG202
|
4.2
|
14.7
|
1.0
|
|
CD
|
B:LYS100
|
4.2
|
18.9
|
1.0
|
|
CA
|
B:ALA79
|
4.2
|
14.0
|
1.0
|
|
NH2
|
J:ARG110
|
4.3
|
16.8
|
1.0
|
|
OE1
|
B:GLU9
|
4.4
|
22.5
|
1.0
|
|
N
|
B:THR78
|
4.5
|
10.0
|
1.0
|
|
N
|
B:ARG52
|
4.6
|
9.7
|
1.0
|
|
OE2
|
B:GLU9
|
4.7
|
27.2
|
1.0
|
|
CD
|
B:GLU9
|
4.7
|
27.7
|
1.0
|
|
CZ
|
J:ARG110
|
4.8
|
14.8
|
1.0
|
|
O
|
B:THR78
|
4.8
|
78.9
|
1.0
|
|
C
|
B:LEU77
|
4.8
|
18.6
|
1.0
|
|
N
|
B:GLN53
|
4.8
|
9.7
|
1.0
|
|
NH1
|
J:ARG110
|
4.8
|
12.5
|
1.0
|
|
O
|
B:GLN53
|
4.9
|
18.8
|
1.0
|
|
CG
|
B:LYS100
|
5.0
|
20.4
|
1.0
|
|
CG2
|
B:THR78
|
5.0
|
17.3
|
1.0
|
|
Fluorine binding site 6 out
of 9 in 7e1h
Go back to
Fluorine Binding Sites List in 7e1h
Fluorine binding site 6 out
of 9 in the Crystal Structure of Rd-Bef
 Mono view
 Stereo pair view
|
|
A full contact list of Fluorine with other atoms in the F binding
site number 6 of Crystal Structure of Rd-Bef within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:F201
b:26.0
occ:1.00
|
F3
|
B:BEF201
|
0.0
|
26.0
|
1.0
|
|
BE
|
B:BEF201
|
1.5
|
18.5
|
1.0
|
|
OD2
|
B:ASP51
|
2.0
|
22.1
|
1.0
|
|
OG1
|
B:THR78
|
2.1
|
25.7
|
1.0
|
|
O
|
J:HOH227
|
2.3
|
13.7
|
1.0
|
|
N
|
B:GLN53
|
2.5
|
9.7
|
1.0
|
|
F2
|
B:BEF201
|
2.5
|
13.1
|
1.0
|
|
F1
|
B:BEF201
|
2.6
|
26.4
|
1.0
|
|
N
|
B:ARG52
|
3.0
|
9.7
|
1.0
|
|
CG
|
B:ASP51
|
3.1
|
25.6
|
1.0
|
|
CB
|
B:THR78
|
3.2
|
21.3
|
1.0
|
|
CB
|
B:ARG52
|
3.2
|
13.9
|
1.0
|
|
CA
|
B:ARG52
|
3.3
|
16.4
|
1.0
|
|
C
|
B:ARG52
|
3.4
|
18.4
|
1.0
|
|
CB
|
B:GLN53
|
3.5
|
12.9
|
1.0
|
|
CA
|
B:GLN53
|
3.5
|
14.3
|
1.0
|
|
CD1
|
B:LEU80
|
3.5
|
9.7
|
1.0
|
|
OD1
|
B:ASP51
|
3.8
|
26.3
|
1.0
|
|
O
|
B:GLN53
|
4.0
|
18.8
|
1.0
|
|
CA
|
B:THR78
|
4.0
|
13.6
|
1.0
|
|
N
|
B:ALA79
|
4.1
|
12.6
|
1.0
|
|
C
|
B:GLN53
|
4.1
|
14.0
|
1.0
|
|
C
|
B:ASP51
|
4.2
|
15.9
|
1.0
|
|
NH2
|
J:ARG110
|
4.2
|
16.8
|
1.0
|
|
CB
|
B:ASP51
|
4.3
|
20.4
|
1.0
|
|
CG
|
B:ARG52
|
4.3
|
15.3
|
1.0
|
|
MG
|
B:MG202
|
4.3
|
14.7
|
1.0
|
|
O
|
B:HOH319
|
4.4
|
30.5
|
1.0
|
|
CG2
|
B:THR78
|
4.4
|
17.3
|
1.0
|
|
O
|
B:ARG52
|
4.6
|
21.4
|
1.0
|
|
C
|
B:THR78
|
4.6
|
19.3
|
1.0
|
|
CA
|
B:ASP51
|
4.6
|
10.4
|
1.0
|
|
CG
|
B:LEU80
|
4.9
|
12.7
|
1.0
|
|
CG
|
B:GLN53
|
5.0
|
15.1
|
1.0
|
|
NH1
|
J:ARG110
|
5.0
|
12.5
|
1.0
|
|
Fluorine binding site 7 out
of 9 in 7e1h
Go back to
Fluorine Binding Sites List in 7e1h
Fluorine binding site 7 out
of 9 in the Crystal Structure of Rd-Bef
 Mono view
 Stereo pair view
|
|
A full contact list of Fluorine with other atoms in the F binding
site number 7 of Crystal Structure of Rd-Bef within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:F201
b:31.5
occ:1.00
|
F1
|
E:BEF201
|
0.0
|
31.5
|
1.0
|
|
BE
|
E:BEF201
|
1.5
|
30.1
|
1.0
|
|
MG
|
E:MG202
|
2.3
|
30.7
|
1.0
|
|
O
|
E:GLN53
|
2.4
|
23.5
|
1.0
|
|
F2
|
E:BEF201
|
2.5
|
18.2
|
1.0
|
|
F3
|
E:BEF201
|
2.6
|
29.5
|
1.0
|
|
OD2
|
E:ASP51
|
2.7
|
42.2
|
1.0
|
|
CB
|
E:GLN53
|
3.2
|
31.4
|
1.0
|
|
C
|
E:GLN53
|
3.3
|
28.1
|
1.0
|
|
OE1
|
E:GLN53
|
3.3
|
28.1
|
1.0
|
|
CG
|
E:ASP51
|
3.5
|
47.1
|
1.0
|
|
CA
|
E:GLN53
|
3.6
|
37.8
|
1.0
|
|
OD1
|
E:ASP51
|
3.6
|
46.9
|
1.0
|
|
N
|
E:GLN53
|
3.7
|
44.4
|
1.0
|
|
OD1
|
E:ASP10
|
3.9
|
34.5
|
1.0
|
|
OD2
|
E:ASP10
|
4.1
|
34.3
|
1.0
|
|
CD
|
E:GLN53
|
4.2
|
37.6
|
1.0
|
|
CG
|
E:GLN53
|
4.2
|
31.7
|
1.0
|
|
CG
|
E:ASP10
|
4.4
|
36.9
|
1.0
|
|
N
|
E:LEU54
|
4.5
|
26.8
|
1.0
|
|
OE2
|
E:GLU9
|
4.8
|
38.6
|
1.0
|
|
C
|
E:ARG52
|
4.9
|
39.4
|
1.0
|
|
CB
|
E:ASP51
|
5.0
|
43.9
|
1.0
|
|
Fluorine binding site 8 out
of 9 in 7e1h
Go back to
Fluorine Binding Sites List in 7e1h
Fluorine binding site 8 out
of 9 in the Crystal Structure of Rd-Bef
 Mono view
 Stereo pair view
|
|
A full contact list of Fluorine with other atoms in the F binding
site number 8 of Crystal Structure of Rd-Bef within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:F201
b:18.2
occ:1.00
|
F2
|
E:BEF201
|
0.0
|
18.2
|
1.0
|
|
BE
|
E:BEF201
|
1.5
|
30.1
|
1.0
|
|
F1
|
E:BEF201
|
2.5
|
31.5
|
1.0
|
|
OD1
|
E:ASP51
|
2.5
|
46.9
|
1.0
|
|
F3
|
E:BEF201
|
2.5
|
29.5
|
1.0
|
|
OD2
|
E:ASP51
|
3.1
|
42.2
|
1.0
|
|
CG
|
E:ASP51
|
3.1
|
47.1
|
1.0
|
|
N
|
E:ALA79
|
3.4
|
29.5
|
1.0
|
|
CB
|
E:ALA79
|
3.5
|
38.4
|
1.0
|
|
CE
|
E:LYS100
|
3.7
|
30.6
|
1.0
|
|
NZ
|
E:LYS100
|
3.9
|
27.6
|
1.0
|
|
CA
|
E:ALA79
|
4.1
|
33.7
|
1.0
|
|
MG
|
E:MG202
|
4.2
|
30.7
|
1.0
|
|
C
|
E:THR78
|
4.3
|
23.8
|
1.0
|
|
CA
|
E:THR78
|
4.3
|
24.1
|
1.0
|
|
OE2
|
E:GLU9
|
4.4
|
38.6
|
1.0
|
|
CB
|
E:ASP51
|
4.5
|
43.9
|
1.0
|
|
CG2
|
E:THR78
|
4.5
|
29.0
|
1.0
|
|
O
|
E:GLN53
|
4.6
|
23.5
|
1.0
|
|
O
|
E:LEU77
|
4.8
|
36.0
|
1.0
|
|
N
|
E:GLN53
|
4.9
|
44.4
|
1.0
|
|
CB
|
E:GLN53
|
5.0
|
31.4
|
1.0
|
|
Fluorine binding site 9 out
of 9 in 7e1h
Go back to
Fluorine Binding Sites List in 7e1h
Fluorine binding site 9 out
of 9 in the Crystal Structure of Rd-Bef
 Mono view
 Stereo pair view
|
|
A full contact list of Fluorine with other atoms in the F binding
site number 9 of Crystal Structure of Rd-Bef within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:F201
b:29.5
occ:1.00
|
F3
|
E:BEF201
|
0.0
|
29.5
|
1.0
|
|
BE
|
E:BEF201
|
1.5
|
30.1
|
1.0
|
|
F2
|
E:BEF201
|
2.5
|
18.2
|
1.0
|
|
F1
|
E:BEF201
|
2.6
|
31.5
|
1.0
|
|
N
|
E:GLN53
|
3.0
|
44.4
|
1.0
|
|
OD1
|
E:ASP51
|
3.0
|
46.9
|
1.0
|
|
CB
|
E:GLN53
|
3.1
|
31.4
|
1.0
|
|
CD1
|
E:LEU80
|
3.3
|
33.7
|
1.0
|
|
CG2
|
E:THR78
|
3.3
|
29.0
|
1.0
|
|
CA
|
E:GLN53
|
3.5
|
37.8
|
1.0
|
|
CG
|
E:ASP51
|
3.7
|
47.1
|
1.0
|
|
OD2
|
E:ASP51
|
3.7
|
42.2
|
1.0
|
|
N
|
E:ALA79
|
3.9
|
29.5
|
1.0
|
|
N
|
E:ARG52
|
4.0
|
43.2
|
1.0
|
|
O
|
E:GLN53
|
4.0
|
23.5
|
1.0
|
|
C
|
E:ARG52
|
4.0
|
39.4
|
1.0
|
|
CB
|
E:ARG52
|
4.1
|
34.2
|
1.0
|
|
C
|
E:GLN53
|
4.2
|
28.1
|
1.0
|
|
CA
|
E:ARG52
|
4.2
|
34.8
|
1.0
|
|
CB
|
E:ALA79
|
4.5
|
38.4
|
1.0
|
|
CG
|
E:GLN53
|
4.5
|
31.7
|
1.0
|
|
CB
|
E:THR78
|
4.5
|
26.3
|
1.0
|
|
CA
|
E:THR78
|
4.6
|
24.1
|
1.0
|
|
N
|
E:LEU80
|
4.6
|
41.6
|
1.0
|
|
CA
|
E:ALA79
|
4.6
|
33.7
|
1.0
|
|
OE1
|
E:GLN53
|
4.6
|
28.1
|
1.0
|
|
MG
|
E:MG202
|
4.7
|
30.7
|
1.0
|
|
CG
|
E:LEU80
|
4.7
|
40.0
|
1.0
|
|
C
|
E:THR78
|
4.8
|
23.8
|
1.0
|
|
CD
|
E:GLN53
|
4.9
|
37.6
|
1.0
|
|
C
|
E:ALA79
|
4.9
|
42.9
|
1.0
|
|
C
|
E:ASP51
|
5.0
|
44.4
|
1.0
|
|
Reference:
S.Hong,
P.Zhang.
Structural Basis of Phosphorylation-Induced Activation of the Response Regulator Vbrr To Be Published.
Page generated: Tue Jul 15 19:13:53 2025
|
