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Fluorine in PDB 7f9s: Toxoplasma Gondii Prolyl-Trna Synthetase (Tgprs) in Complex with Inhibitor T35 and Febrifugine (Ff)

Protein crystallography data

The structure of Toxoplasma Gondii Prolyl-Trna Synthetase (Tgprs) in Complex with Inhibitor T35 and Febrifugine (Ff), PDB code: 7f9s was solved by Y.Manickam, N.Malhotra, A.Sharma, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 34.00 / 1.86
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 116.51, 73.65, 75.03, 90, 111.39, 90
R / Rfree (%) 17.2 / 20.9

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Toxoplasma Gondii Prolyl-Trna Synthetase (Tgprs) in Complex with Inhibitor T35 and Febrifugine (Ff) (pdb code 7f9s). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total only one binding site of Fluorine was determined in the Toxoplasma Gondii Prolyl-Trna Synthetase (Tgprs) in Complex with Inhibitor T35 and Febrifugine (Ff), PDB code: 7f9s:

Fluorine binding site 1 out of 1 in 7f9s

Go back to Fluorine Binding Sites List in 7f9s
Fluorine binding site 1 out of 1 in the Toxoplasma Gondii Prolyl-Trna Synthetase (Tgprs) in Complex with Inhibitor T35 and Febrifugine (Ff)


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Toxoplasma Gondii Prolyl-Trna Synthetase (Tgprs) in Complex with Inhibitor T35 and Febrifugine (Ff) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F901

b:44.2
occ:0.89
F A:1TI901 0.0 44.2 0.9
C10 A:1TI901 1.4 44.3 0.9
C11 A:1TI901 2.3 37.5 0.9
C9 A:1TI901 2.4 35.0 0.9
CB A:PRO476 3.3 46.2 1.0
O A:HOH1010 3.3 60.2 1.0
O A:LYS474 3.4 57.8 1.0
CA A:PRO476 3.5 42.7 1.0
C12 A:1TI901 3.6 37.2 0.9
C8 A:1TI901 3.6 36.9 0.9
N A:PRO476 3.7 43.8 1.0
CG A:ARG483 3.9 46.1 1.0
CD A:PRO476 4.0 49.1 1.0
O A:ARG481 4.1 41.5 1.0
C13 A:1TI901 4.1 35.8 0.9
CG A:PRO476 4.1 48.5 1.0
O A:GLU472 4.1 59.3 1.0
C A:GLN475 4.2 43.4 1.0
CA A:GLY363 4.3 54.7 1.0
NE A:ARG483 4.3 66.1 1.0
C A:LYS474 4.4 57.0 1.0
N A:ARG483 4.4 37.3 1.0
O A:GLN475 4.5 43.8 1.0
CA A:THR482 4.5 37.5 1.0
C A:THR482 4.6 42.2 1.0
C A:ARG481 4.7 42.5 1.0
CD A:ARG483 4.8 52.7 1.0
C14 A:1TI901 4.8 40.4 0.9
C A:GLU472 4.9 60.6 1.0
C7 A:1TI901 4.9 32.7 0.9
N A:THR482 4.9 39.6 1.0
CB A:GLU472 4.9 59.7 0.4
CB A:ARG483 4.9 39.6 1.0
CB A:GLU472 4.9 59.7 0.6
CA A:ARG483 4.9 37.4 1.0
C A:PRO476 5.0 46.8 1.0

Reference:

N.Malhotra, Y.Manickam, A.Sharma. Tgprs with Double Inhibitors To Be Published.
Page generated: Tue Jul 15 19:25:17 2025

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