Fluorine in PDB 7k8g: Crystal Structure of Bovine RPE65 in Complex with 4-Fluoro-Mb-004 and Palmitate

All present enzymatic activity of Crystal Structure of Bovine RPE65 in Complex with 4-Fluoro-Mb-004 and Palmitate:
3.1.1.64; 5.3.3.22;

The structure of Crystal Structure of Bovine RPE65 in Complex with 4-Fluoro-Mb-004 and Palmitate, PDB code: 7k8g was solved by P.D.Kiser, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	47.88 / 1.95
Space group	P 65
Cell size a, b, c (Å), α, β, γ (°)	175.511, 175.511, 86.657, 90, 90, 120
R / Rfree (%)	19.4 / 21.1

The structure of Crystal Structure of Bovine RPE65 in Complex with 4-Fluoro-Mb-004 and Palmitate also contains other interesting chemical elements:

Iron

(Fe)

2 atoms

The binding sites of Fluorine atom in the Crystal Structure of Bovine RPE65 in Complex with 4-Fluoro-Mb-004 and Palmitate (pdb code 7k8g). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total 2 binding sites of Fluorine where determined in the Crystal Structure of Bovine RPE65 in Complex with 4-Fluoro-Mb-004 and Palmitate, PDB code: 7k8g:
Jump to Fluorine binding site number: 1; 2;

Fluorine binding site 1 out of 2 in the Crystal Structure of Bovine RPE65 in Complex with 4-Fluoro-Mb-004 and Palmitate


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Crystal Structure of Bovine RPE65 in Complex with 4-Fluoro-Mb-004 and Palmitate within 5.0Å range: probe atom residue distance (Å) B Occ A:F603 b:54.2 occ:1.00 F A:W9A603 0.0 54.2 1.0 C6 A:W9A603 1.4 52.7 1.0 C7 A:W9A603 2.3 53.5 1.0 C5 A:W9A603 2.4 52.0 1.0 O1 A:W9A603 2.6 54.3 1.0 CE2 A:TYR275 3.1 43.0 1.0 CD2 A:TYR275 3.1 42.5 1.0 CZ A:TYR275 3.3 43.0 1.0 CG A:TYR275 3.4 42.2 1.0 CE1 A:TYR275 3.5 42.6 1.0 CD1 A:TYR275 3.6 42.5 1.0 CG2 A:THR149 3.6 36.9 1.0 C4 A:W9A603 3.6 51.5 1.0 C16 A:W9A603 3.6 52.6 1.0 CG2 A:THR129 3.9 38.9 1.0 C8 A:W9A603 3.9 56.0 1.0 OH A:TYR275 4.1 43.3 1.0 C3 A:W9A603 4.1 51.4 1.0 CB A:TYR275 4.2 41.6 1.0 C10 A:W9A603 4.3 56.2 1.0 C9 A:W9A603 4.5 56.6 1.0 CD1 A:PHE103 4.6 38.8 1.0 C13 A:W9A603 4.8 57.6 1.0

Fluorine binding site 2 out of 2 in the Crystal Structure of Bovine RPE65 in Complex with 4-Fluoro-Mb-004 and Palmitate


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 2 of Crystal Structure of Bovine RPE65 in Complex with 4-Fluoro-Mb-004 and Palmitate within 5.0Å range: probe atom residue distance (Å) B Occ B:F603 b:51.0 occ:1.00 F B:W9A603 0.0 51.0 1.0 C6 B:W9A603 1.4 49.5 1.0 C7 B:W9A603 2.3 49.8 1.0 C5 B:W9A603 2.4 49.2 1.0 O1 B:W9A603 2.6 50.3 1.0 CE2 B:TYR275 3.0 38.0 1.0 CD2 B:TYR275 3.0 38.0 1.0 CZ B:TYR275 3.3 38.3 1.0 CG B:TYR275 3.4 37.9 1.0 CG2 B:THR149 3.5 36.7 1.0 C4 B:W9A603 3.6 49.2 1.0 CE1 B:TYR275 3.6 38.4 1.0 C16 B:W9A603 3.6 48.9 1.0 CD1 B:TYR275 3.6 38.3 1.0 C8 B:W9A603 4.0 51.1 1.0 CG2 B:THR129 4.0 37.1 1.0 OH B:TYR275 4.1 39.4 1.0 C3 B:W9A603 4.1 48.1 1.0 CB B:TYR275 4.2 38.0 1.0 C10 B:W9A603 4.4 51.2 1.0 CD1 B:PHE103 4.6 37.5 1.0 C14 B:W9A603 4.6 52.5 1.0 C9 B:W9A603 4.6 51.4 1.0 CB B:THR149 5.0 36.5 1.0

P.D.Kiser, P.D.Kiser. N/A N/A.