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Fluorine in PDB 7li5: Crystal Structure Analysis of Human TEAD1

Protein crystallography data

The structure of Crystal Structure Analysis of Human TEAD1, PDB code: 7li5 was solved by H.-S.Seo, S.Dhe-Paganon, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 35.29 / 1.68
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 36.56, 89.32, 135.02, 90, 90, 90
R / Rfree (%) 19.7 / 22.4

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Crystal Structure Analysis of Human TEAD1 (pdb code 7li5). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total 6 binding sites of Fluorine where determined in the Crystal Structure Analysis of Human TEAD1, PDB code: 7li5:
Jump to Fluorine binding site number: 1; 2; 3; 4; 5; 6;

Fluorine binding site 1 out of 6 in 7li5

Go back to Fluorine Binding Sites List in 7li5
Fluorine binding site 1 out of 6 in the Crystal Structure Analysis of Human TEAD1


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Crystal Structure Analysis of Human TEAD1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F501

b:49.3
occ:1.00
 F1 A:Y2D501 0.0 49.3 1.0
C1 A:Y2D501 1.3 43.9 1.0
F2 A:Y2D501 2.1 40.0 1.0
F3 A:Y2D501 2.1 44.1 1.0
C2 A:Y2D501 2.4 26.8 1.0
H20 A:Y2D501 2.5 36.5 1.0
C22 A:Y2D501 2.8 30.4 1.0
CD2 A:LEU294 2.8 38.4 1.0
CB A:ALA292 3.6 27.5 1.0
C3 A:Y2D501 3.6 28.7 1.0
CG A:LEU294 3.7 39.3 1.0
H1 A:Y2D501 3.8 34.5 1.0
CD1 A:LEU294 4.0 43.4 1.0
C21 A:Y2D501 4.1 29.9 1.0
CG1 A:ILE366 4.4 27.7 1.0
CD1 A:PHE239 4.5 25.5 1.0
CD1 A:LEU369 4.6 31.3 1.0
CB A:PHE239 4.7 20.9 1.0
C4 A:Y2D501 4.7 26.7 1.0
H19 A:Y2D501 4.7 35.9 1.0
CG A:PHE239 4.8 26.4 1.0
C5 A:Y2D501 4.9 26.9 1.0
CA A:ALA292 5.0 22.4 1.0

Fluorine binding site 2 out of 6 in 7li5

Go back to Fluorine Binding Sites List in 7li5
Fluorine binding site 2 out of 6 in the Crystal Structure Analysis of Human TEAD1


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 2 of Crystal Structure Analysis of Human TEAD1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F501

b:40.0
occ:1.00
 F2 A:Y2D501 0.0 40.0 1.0
C1 A:Y2D501 1.3 43.9 1.0
F3 A:Y2D501 2.1 44.1 1.0
F1 A:Y2D501 2.1 49.3 1.0
C2 A:Y2D501 2.3 26.8 1.0
H1 A:Y2D501 2.5 34.5 1.0
C3 A:Y2D501 2.7 28.7 1.0
C22 A:Y2D501 3.6 30.4 1.0
CB A:ALA292 3.6 27.5 1.0
H20 A:Y2D501 3.8 36.5 1.0
CD1 A:LEU369 3.9 31.3 1.0
CD2 A:LEU382 4.1 23.7 1.0
C4 A:Y2D501 4.1 26.7 1.0
CD1 A:LEU382 4.3 24.3 1.0
CD2 A:LEU294 4.6 38.4 1.0
CD2 A:PHE407 4.7 24.2 1.0
H2 A:Y2D501 4.7 32.0 1.0
C21 A:Y2D501 4.7 29.9 1.0
CG A:LEU382 4.8 24.3 1.0
CD1 A:LEU294 4.9 43.4 1.0
CB A:PHE407 4.9 23.7 1.0
C5 A:Y2D501 4.9 26.9 1.0
CG A:LEU294 5.0 39.3 1.0

Fluorine binding site 3 out of 6 in 7li5

Go back to Fluorine Binding Sites List in 7li5
Fluorine binding site 3 out of 6 in the Crystal Structure Analysis of Human TEAD1


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 3 of Crystal Structure Analysis of Human TEAD1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F501

b:44.1
occ:1.00
 F3 A:Y2D501 0.0 44.1 1.0
C1 A:Y2D501 1.3 43.9 1.0
F2 A:Y2D501 2.1 40.0 1.0
F1 A:Y2D501 2.1 49.3 1.0
C2 A:Y2D501 2.3 26.8 1.0
C22 A:Y2D501 3.1 30.4 1.0
H20 A:Y2D501 3.2 36.5 1.0
C3 A:Y2D501 3.2 28.7 1.0
CD1 A:LEU369 3.3 31.3 1.0
H1 A:Y2D501 3.3 34.5 1.0
CG1 A:ILE366 3.6 27.7 1.0
CD2 A:LEU294 4.2 38.4 1.0
CD2 A:PHE365 4.3 31.0 1.0
CA A:ILE366 4.3 26.3 1.0
CE2 A:PHE365 4.4 33.8 1.0
C21 A:Y2D501 4.4 29.9 1.0
C4 A:Y2D501 4.4 26.7 1.0
CB A:ILE366 4.5 25.4 1.0
CG A:LEU369 4.6 30.1 1.0
CD1 A:ILE366 4.6 28.9 1.0
CD1 A:LEU294 4.7 43.4 1.0
N A:ILE366 4.8 26.5 1.0
CE A:MET362 4.8 29.9 1.0
CD2 A:LEU382 4.9 23.7 1.0
C5 A:Y2D501 4.9 26.9 1.0
CB A:LEU369 4.9 32.7 1.0

Fluorine binding site 4 out of 6 in 7li5

Go back to Fluorine Binding Sites List in 7li5
Fluorine binding site 4 out of 6 in the Crystal Structure Analysis of Human TEAD1


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 4 of Crystal Structure Analysis of Human TEAD1 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:F501

b:39.2
occ:1.00
 F1 B:Y2D501 0.0 39.2 1.0
C1 B:Y2D501 1.3 39.4 1.0
F3 B:Y2D501 2.1 37.8 1.0
F2 B:Y2D501 2.1 37.0 1.0
C2 B:Y2D501 2.3 28.5 1.0
H20 B:Y2D501 3.1 32.1 1.0
C22 B:Y2D501 3.1 26.8 1.0
CD1 B:LEU369 3.2 38.8 1.0
C3 B:Y2D501 3.3 27.8 1.0
H1 B:Y2D501 3.4 33.4 1.0
CG1 B:ILE366 3.5 28.2 1.0
CD2 B:LEU294 4.1 36.1 1.0
CE2 B:PHE365 4.2 30.9 1.0
CD2 B:PHE365 4.3 31.6 1.0
C21 B:Y2D501 4.3 26.1 1.0
CA B:ILE366 4.5 30.2 1.0
CD1 B:LEU294 4.5 48.3 1.0
C4 B:Y2D501 4.5 30.1 1.0
CB B:ILE366 4.5 29.1 1.0
CD1 B:ILE366 4.6 27.8 1.0
CG B:LEU369 4.6 36.2 1.0
CG B:LEU294 4.6 38.6 1.0
CD2 B:LEU382 4.7 27.0 1.0
C5 B:Y2D501 4.9 28.6 1.0
CB B:LEU369 4.9 38.1 1.0
CG2 B:ILE366 5.0 31.2 1.0
CE B:MET362 5.0 30.8 1.0
H19 B:Y2D501 5.0 31.4 1.0

Fluorine binding site 5 out of 6 in 7li5

Go back to Fluorine Binding Sites List in 7li5
Fluorine binding site 5 out of 6 in the Crystal Structure Analysis of Human TEAD1


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 5 of Crystal Structure Analysis of Human TEAD1 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:F501

b:37.0
occ:1.00
 F2 B:Y2D501 0.0 37.0 1.0
C1 B:Y2D501 1.3 39.4 1.0
F3 B:Y2D501 2.1 37.8 1.0
F1 B:Y2D501 2.1 39.2 1.0
C2 B:Y2D501 2.3 28.5 1.0
H20 B:Y2D501 2.6 32.1 1.0
C22 B:Y2D501 2.8 26.8 1.0
CD2 B:LEU294 3.4 36.1 1.0
C3 B:Y2D501 3.5 27.8 1.0
CG B:LEU294 3.6 38.6 1.0
CB B:ALA292 3.6 28.4 1.0
CD1 B:PHE239 3.7 28.6 1.0
H1 B:Y2D501 3.8 33.4 1.0
CD1 B:LEU294 4.0 48.3 1.0
CB B:PHE239 4.0 27.2 1.0
CG B:PHE239 4.1 26.4 1.0
C21 B:Y2D501 4.2 26.1 1.0
CG1 B:ILE366 4.5 28.2 1.0
CE1 B:PHE239 4.6 29.1 1.0
C4 B:Y2D501 4.7 30.1 1.0
O B:ASP293 4.7 35.6 1.0
CD1 B:LEU369 4.7 38.8 1.0
H19 B:Y2D501 4.8 31.4 1.0
C5 B:Y2D501 4.9 28.6 1.0
CA B:ALA292 4.9 29.0 1.0
CA B:PHE239 5.0 26.7 1.0
CB B:LEU294 5.0 35.2 1.0

Fluorine binding site 6 out of 6 in 7li5

Go back to Fluorine Binding Sites List in 7li5
Fluorine binding site 6 out of 6 in the Crystal Structure Analysis of Human TEAD1


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 6 of Crystal Structure Analysis of Human TEAD1 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:F501

b:37.8
occ:1.00
 F3 B:Y2D501 0.0 37.8 1.0
C1 B:Y2D501 1.3 39.4 1.0
F1 B:Y2D501 2.1 39.2 1.0
F2 B:Y2D501 2.1 37.0 1.0
C2 B:Y2D501 2.4 28.5 1.0
H1 B:Y2D501 2.4 33.4 1.0
C3 B:Y2D501 2.7 27.8 1.0
CB B:ALA292 3.3 28.4 1.0
C22 B:Y2D501 3.6 26.8 1.0
CD2 B:LEU382 3.8 27.0 1.0
H20 B:Y2D501 3.9 32.1 1.0
CD1 B:LEU369 3.9 38.8 1.0
C4 B:Y2D501 4.1 30.1 1.0
CD1 B:LEU294 4.2 48.3 1.0
CD1 B:LEU382 4.3 35.6 1.0
CG B:LEU294 4.5 38.6 1.0
CG B:LEU382 4.6 34.5 1.0
H2 B:Y2D501 4.7 36.1 1.0
CD2 B:LEU294 4.7 36.1 1.0
C21 B:Y2D501 4.7 26.1 1.0
CA B:ALA292 4.9 29.0 1.0
C5 B:Y2D501 5.0 28.6 1.0
CE2 B:PHE365 5.0 30.9 1.0
CD2 B:PHE407 5.0 22.6 1.0

Reference:

H.-S.Seo, S.Dhe-Paganon. Crystal Structure Analysis of Human TEAD1 To Be Published.
Page generated: Tue Jul 15 21:16:37 2025

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