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Fluorine in PDB 7n7w: Crystal Structure of Sars-Cov-2 Nendou in Complex with CSC000178569

Protein crystallography data

The structure of Crystal Structure of Sars-Cov-2 Nendou in Complex with CSC000178569, PDB code: 7n7w was solved by A.S.Godoy, A.Douangamath, A.M.Nakamura, A.Dias, T.Krojer, G.D.Noske, V.O.Gawiljuk, R.S.Fernandes, M.Fairhead, A.Powell, L.Dunnet, A.Aimon, D.Fearon, J.Brandao-Neto, R.Skyner, F.Von Delft, G.Oliva, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 85.37 / 2.42
Space group P 63
Cell size a, b, c (Å), α, β, γ (°) 150.104, 150.104, 113.206, 90, 90, 120
R / Rfree (%) 19.4 / 22.8

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Crystal Structure of Sars-Cov-2 Nendou in Complex with CSC000178569 (pdb code 7n7w). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total only one binding site of Fluorine was determined in the Crystal Structure of Sars-Cov-2 Nendou in Complex with CSC000178569, PDB code: 7n7w:

Fluorine binding site 1 out of 1 in 7n7w

Go back to Fluorine Binding Sites List in 7n7w
Fluorine binding site 1 out of 1 in the Crystal Structure of Sars-Cov-2 Nendou in Complex with CSC000178569


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Crystal Structure of Sars-Cov-2 Nendou in Complex with CSC000178569 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:F401

b:68.6
occ:1.00
F11 B:0OI401 0.0 68.6 1.0
C10 B:0OI401 1.4 60.6 1.0
C09 B:0OI401 2.4 56.2 1.0
C05 B:0OI401 2.5 53.5 1.0
N04 B:0OI401 3.0 55.0 1.0
O B:GLY150 3.6 44.1 1.0
C08 B:0OI401 3.7 62.4 1.0
C06 B:0OI401 3.8 56.6 1.0
CD2 B:LEU151 4.0 41.8 1.0
C B:GLY150 4.1 45.0 1.0
C07 B:0OI401 4.2 60.8 1.0
CA B:GLY150 4.4 44.9 1.0
O B:LYS149 4.4 40.9 1.0
C03 B:0OI401 4.5 50.0 1.0
CG B:LEU151 4.6 39.7 1.0
NH2 B:ARG135 4.6 61.3 1.0
N B:LEU151 5.0 43.7 1.0

Reference:

A.S.Godoy, A.Douangamath, A.M.Nakamura, A.Dias, T.Krojer, G.D.Noske, V.O.Gawiljuk, R.S.Fernandes, M.Fairhead, A.Powell, L.Dunnet, A.Aimon, D.Fearon, J.Brandao-Neto, R.Skyner, F.Von Delft, G.Oliva. Pandda Analysis Group Deposition To Be Published.
Page generated: Tue Jul 15 22:02:50 2025

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