Fluorine in PDB 7rd7: Structure of the S. Cerevisiae P4B Atpase Lipid Flippase in the E2P- Transition State

All present enzymatic activity of Structure of the S. Cerevisiae P4B Atpase Lipid Flippase in the E2P- Transition State:
7.6.2.1;

The structure of Structure of the S. Cerevisiae P4B Atpase Lipid Flippase in the E2P- Transition State also contains other interesting chemical elements:

Aluminium	(Al)	1 atom
Magnesium	(Mg)	1 atom

The binding sites of Fluorine atom in the Structure of the S. Cerevisiae P4B Atpase Lipid Flippase in the E2P- Transition State (pdb code 7rd7). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total 4 binding sites of Fluorine where determined in the Structure of the S. Cerevisiae P4B Atpase Lipid Flippase in the E2P- Transition State, PDB code: 7rd7:
Jump to Fluorine binding site number: 1; 2; 3; 4;

Fluorine binding site 1 out of 4 in the Structure of the S. Cerevisiae P4B Atpase Lipid Flippase in the E2P- Transition State


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Structure of the S. Cerevisiae P4B Atpase Lipid Flippase in the E2P- Transition State within 5.0Å range: probe atom residue distance (Å) B Occ A:F1201 b:44.5 occ:1.00 F1 A:ALF1201 0.0 44.5 1.0 AL A:ALF1201 1.8 44.5 1.0 N A:THR505 2.4 45.4 1.0 F3 A:ALF1201 2.5 44.5 1.0 CG2 A:THR774 2.5 46.8 1.0 F4 A:ALF1201 2.5 44.5 1.0 N A:LYS504 2.8 44.7 1.0 OD1 A:ASP503 2.8 40.8 1.0 CB A:LYS504 3.2 44.7 1.0 CA A:LYS504 3.2 44.7 1.0 OG1 A:THR505 3.2 45.4 1.0 C A:LYS504 3.2 44.7 1.0 CG A:ASP503 3.4 40.8 1.0 CB A:THR505 3.5 45.4 1.0 CA A:THR505 3.5 45.4 1.0 CB A:THR774 3.5 46.8 1.0 OG1 A:THR774 3.5 46.8 1.0 OD2 A:ASP503 3.6 40.8 1.0 F2 A:ALF1201 3.6 44.5 1.0 CA A:THR774 4.0 46.8 1.0 C A:ASP503 4.0 40.8 1.0 O A:GLY309 4.2 50.6 1.0 CE A:LYS504 4.3 44.7 1.0 O A:THR505 4.3 45.4 1.0 CG A:LYS504 4.3 44.7 1.0 C A:THR505 4.4 45.4 1.0 O A:LYS504 4.4 44.7 1.0 CA A:GLY309 4.4 50.6 1.0 CA A:ASP503 4.5 40.8 1.0 CB A:ASP503 4.5 40.8 1.0 N A:GLY775 4.5 47.7 1.0 O A:LEU773 4.6 40.1 1.0 C A:THR774 4.8 46.8 1.0 C A:GLY309 4.8 50.6 1.0 CD A:LYS504 4.8 44.7 1.0 NZ A:LYS504 5.0 44.7 1.0 O A:ASP503 5.0 40.8 1.0 CG2 A:THR505 5.0 45.4 1.0

Fluorine binding site 2 out of 4 in the Structure of the S. Cerevisiae P4B Atpase Lipid Flippase in the E2P- Transition State


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 2 of Structure of the S. Cerevisiae P4B Atpase Lipid Flippase in the E2P- Transition State within 5.0Å range: probe atom residue distance (Å) B Occ A:F1201 b:44.5 occ:1.00 F2 A:ALF1201 0.0 44.5 1.0 AL A:ALF1201 1.8 44.5 1.0 ND2 A:ASN885 2.5 44.3 1.0 F4 A:ALF1201 2.5 44.5 1.0 F3 A:ALF1201 2.5 44.5 1.0 MG A:MG1202 2.7 42.2 1.0 CA A:GLY309 3.1 50.6 1.0 OD1 A:ASN885 3.1 44.3 1.0 OD1 A:ASP503 3.1 40.8 1.0 CG A:ASN885 3.2 44.3 1.0 F1 A:ALF1201 3.6 44.5 1.0 OD2 A:ASP503 3.6 40.8 1.0 N A:GLY309 3.6 50.6 1.0 CG A:ASP503 3.7 40.8 1.0 NZ A:LYS862 3.8 42.1 1.0 C A:ASP308 4.2 49.2 1.0 O A:ASP308 4.2 49.2 1.0 OD2 A:ASP886 4.4 41.4 1.0 C A:GLY309 4.4 50.6 1.0 N A:GLY775 4.6 47.7 1.0 CB A:ASN885 4.6 44.3 1.0 O A:ASP305 4.7 49.8 1.0 O A:ASP882 4.7 41.5 1.0 O A:GLY309 4.7 50.6 1.0 CB A:THR505 4.7 45.4 1.0 O A:THR505 4.7 45.4 1.0 OG1 A:THR505 5.0 45.4 1.0 CG2 A:THR774 5.0 46.8 1.0

Fluorine binding site 3 out of 4 in the Structure of the S. Cerevisiae P4B Atpase Lipid Flippase in the E2P- Transition State


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 3 of Structure of the S. Cerevisiae P4B Atpase Lipid Flippase in the E2P- Transition State within 5.0Å range: probe atom residue distance (Å) B Occ A:F1201 b:44.5 occ:1.00 F3 A:ALF1201 0.0 44.5 1.0 AL A:ALF1201 1.8 44.5 1.0 N A:GLY775 2.5 47.7 1.0 F1 A:ALF1201 2.5 44.5 1.0 F2 A:ALF1201 2.5 44.5 1.0 CG2 A:THR774 2.7 46.8 1.0 CA A:THR774 2.8 46.8 1.0 OD1 A:ASP503 2.9 40.8 1.0 C A:THR774 3.1 46.8 1.0 CB A:THR774 3.3 46.8 1.0 CA A:GLY309 3.4 50.6 1.0 NZ A:LYS862 3.6 42.1 1.0 F4 A:ALF1201 3.6 44.5 1.0 CA A:GLY775 3.6 47.7 1.0 ND2 A:ASN885 3.7 44.3 1.0 CG A:ASP503 4.0 40.8 1.0 OG1 A:THR774 4.0 46.8 1.0 N A:THR774 4.1 46.8 1.0 O A:LEU773 4.1 40.1 1.0 N A:GLY309 4.1 50.6 1.0 N A:ASP776 4.2 52.7 1.0 O A:GLY309 4.3 50.6 1.0 C A:GLY309 4.3 50.6 1.0 C A:GLY775 4.3 47.7 1.0 O A:THR774 4.3 46.8 1.0 OD2 A:ASP503 4.5 40.8 1.0 C A:LEU773 4.5 40.1 1.0 OG1 A:THR505 4.7 45.4 1.0 N A:LYS504 4.8 44.7 1.0 CE A:LYS862 4.8 42.1 1.0 N A:THR505 4.9 45.4 1.0 CG A:ASN885 4.9 44.3 1.0

Fluorine binding site 4 out of 4 in the Structure of the S. Cerevisiae P4B Atpase Lipid Flippase in the E2P- Transition State


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 4 of Structure of the S. Cerevisiae P4B Atpase Lipid Flippase in the E2P- Transition State within 5.0Å range: probe atom residue distance (Å) B Occ A:F1201 b:44.5 occ:1.00 F4 A:ALF1201 0.0 44.5 1.0 AL A:ALF1201 1.8 44.5 1.0 OD2 A:ASP503 2.3 40.8 1.0 O A:THR505 2.4 45.4 1.0 F2 A:ALF1201 2.5 44.5 1.0 F1 A:ALF1201 2.5 44.5 1.0 N A:THR505 2.8 45.4 1.0 CB A:THR505 3.0 45.4 1.0 CG A:ASP503 3.0 40.8 1.0 OD1 A:ASP503 3.0 40.8 1.0 CA A:THR505 3.1 45.4 1.0 C A:THR505 3.1 45.4 1.0 MG A:MG1202 3.6 42.2 1.0 F3 A:ALF1201 3.6 44.5 1.0 OG1 A:THR505 3.7 45.4 1.0 C A:LYS504 3.9 44.7 1.0 N A:LYS504 4.1 44.7 1.0 CG2 A:THR505 4.2 45.4 1.0 CA A:GLY309 4.2 50.6 1.0 OD1 A:ASP882 4.3 41.5 1.0 OG1 A:THR507 4.4 40.5 1.0 N A:GLY506 4.4 43.5 1.0 CB A:ASP503 4.4 40.8 1.0 CA A:LYS504 4.5 44.7 1.0 O A:GLY309 4.6 50.6 1.0 O A:LYS504 4.7 44.7 1.0 O A:ASP305 4.7 49.8 1.0 O A:ASP882 4.8 41.5 1.0 C A:ASP503 4.8 40.8 1.0 N A:THR507 4.8 40.5 1.0 OD2 A:ASP886 4.9 41.4 1.0 CG2 A:THR774 4.9 46.8 1.0 C A:GLY309 4.9 50.6 1.0 ND2 A:ASN885 5.0 44.3 1.0

L.Bai, B.K.Jain, Q.You, H.D.Duan, T.R.Graham, H.Li. Structure of the S. Cerevisiae P4B Atpase Lipid Flippase in the E2P State To Be Published.