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Fluorine in PDB 7rv0: Crystal Structure of the BCL6 Btb Domain in Complex with Oicr-8446

Protein crystallography data

The structure of Crystal Structure of the BCL6 Btb Domain in Complex with Oicr-8446, PDB code: 7rv0 was solved by D.A.Kuntz, G.G.Prive, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 27.54 / 1.45
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 30.768, 72.771, 55.706, 90, 107.49, 90
R / Rfree (%) 15.8 / 17

Other elements in 7rv0:

The structure of Crystal Structure of the BCL6 Btb Domain in Complex with Oicr-8446 also contains other interesting chemical elements:

Chlorine (Cl) 2 atoms

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Crystal Structure of the BCL6 Btb Domain in Complex with Oicr-8446 (pdb code 7rv0). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total only one binding site of Fluorine was determined in the Crystal Structure of the BCL6 Btb Domain in Complex with Oicr-8446, PDB code: 7rv0:

Fluorine binding site 1 out of 1 in 7rv0

Go back to Fluorine Binding Sites List in 7rv0
Fluorine binding site 1 out of 1 in the Crystal Structure of the BCL6 Btb Domain in Complex with Oicr-8446


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Crystal Structure of the BCL6 Btb Domain in Complex with Oicr-8446 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F201

b:35.6
occ:0.84
F09 A:7RL201 0.0 35.6 0.8
C08 A:7RL201 1.3 33.9 0.8
C10 A:7RL201 2.3 34.5 0.8
C07 A:7RL201 2.3 30.4 0.8
H101 A:7RL201 2.5 41.4 0.8
H051 A:7RL201 2.6 32.1 0.8
N05 A:7RL201 2.7 26.7 0.8
C06 A:7RL201 2.8 28.0 0.8
H061 A:7RL201 2.9 33.7 0.8
C11 A:7RL201 3.6 33.7 0.8
C13 A:7RL201 3.6 31.8 0.8
C04 A:7RL201 3.6 22.5 0.8
H062 A:7RL201 3.8 33.7 0.8
O A:HOH361 4.0 24.5 0.5
C12 A:7RL201 4.1 32.3 0.8
O A:HOH336 4.2 43.2 1.0
H031 A:7RL201 4.3 26.8 0.8
N03 A:7RL201 4.3 22.4 0.8
H111 A:7RL201 4.4 40.5 0.8
N14 A:7RL201 4.4 20.6 0.8
H131 A:7RL201 4.4 38.2 0.8

Reference:

I.Watson, M.Isaac. Crystal Structure of the BCL6 Btb Domain in Complex with Oicr-8446 To Be Published.
Page generated: Tue Jul 15 23:57:57 2025

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