Fluorine in PDB 7wnx: Cryo-Em Structure of Mycobacterium Smegmatis MMPL3 Complexed with ST004 in Lipid Nanodiscs

The structure of Cryo-Em Structure of Mycobacterium Smegmatis MMPL3 Complexed with ST004 in Lipid Nanodiscs also contains other interesting chemical elements:

Chlorine

(Cl)

1 atom

The binding sites of Fluorine atom in the Cryo-Em Structure of Mycobacterium Smegmatis MMPL3 Complexed with ST004 in Lipid Nanodiscs (pdb code 7wnx). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total 2 binding sites of Fluorine where determined in the Cryo-Em Structure of Mycobacterium Smegmatis MMPL3 Complexed with ST004 in Lipid Nanodiscs, PDB code: 7wnx:
Jump to Fluorine binding site number: 1; 2;

Fluorine binding site 1 out of 2 in the Cryo-Em Structure of Mycobacterium Smegmatis MMPL3 Complexed with ST004 in Lipid Nanodiscs


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Cryo-Em Structure of Mycobacterium Smegmatis MMPL3 Complexed with ST004 in Lipid Nanodiscs within 5.0Å range: probe atom residue distance (Å) B Occ A:F1101 b:80.3 occ:1.00 F08 A:1I21101 0.0 80.3 1.0 C07 A:1I21101 1.4 80.3 1.0 C06 A:1I21101 2.4 80.3 1.0 C09 A:1I21101 2.4 80.3 1.0 N05 A:1I21101 2.7 80.3 1.0 N04 A:1I21101 3.0 80.3 1.0 CD2 A:LEU686 3.4 94.3 1.0 C10 A:1I21101 3.6 80.3 1.0 C13 A:1I21101 3.6 80.3 1.0 C14 A:1I21101 3.7 80.3 1.0 CG A:LEU686 3.7 94.3 1.0 CB A:LEU686 4.0 94.3 1.0 C03 A:1I21101 4.0 80.3 1.0 CD2 A:LEU708 4.0 94.3 1.0 C12 A:1I21101 4.1 80.3 1.0 CD2 A:LEU642 4.3 94.3 1.0 CD1 A:LEU708 4.3 94.3 1.0 C16 A:1I21101 4.3 80.3 1.0 CD1 A:LEU712 4.3 94.3 1.0 C22 A:1I21101 4.3 80.3 1.0 C15 A:1I21101 4.5 80.3 1.0 CG A:LEU708 4.5 94.3 1.0 CB A:LEU708 4.6 94.3 1.0 F11 A:1I21101 4.7 80.3 1.0 CD2 A:LEU712 4.9 94.3 1.0

Fluorine binding site 2 out of 2 in the Cryo-Em Structure of Mycobacterium Smegmatis MMPL3 Complexed with ST004 in Lipid Nanodiscs


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 2 of Cryo-Em Structure of Mycobacterium Smegmatis MMPL3 Complexed with ST004 in Lipid Nanodiscs within 5.0Å range: probe atom residue distance (Å) B Occ A:F1101 b:80.3 occ:1.00 F11 A:1I21101 0.0 80.3 1.0 C10 A:1I21101 1.4 80.3 1.0 C09 A:1I21101 2.4 80.3 1.0 C12 A:1I21101 2.4 80.3 1.0 CG1 A:VAL689 3.1 94.3 1.0 O A:LEU686 3.1 94.3 1.0 N A:ALA690 3.2 94.3 1.0 CB A:VAL689 3.3 94.3 1.0 C07 A:1I21101 3.6 80.3 1.0 C13 A:1I21101 3.6 80.3 1.0 C A:VAL689 3.7 94.3 1.0 CA A:ALA690 3.7 94.3 1.0 CB A:ALA690 3.8 94.3 1.0 CG A:LEU248 4.0 94.3 1.0 CA A:VAL689 4.0 94.3 1.0 C A:LEU686 4.1 94.3 1.0 C06 A:1I21101 4.1 80.3 1.0 CD1 A:LEU248 4.2 94.3 1.0 CA A:LEU686 4.3 94.3 1.0 O A:LEU248 4.5 94.3 1.0 O A:VAL689 4.5 94.3 1.0 CG2 A:VAL689 4.5 94.3 1.0 N A:VAL689 4.6 94.3 1.0 CD2 A:LEU248 4.7 94.3 1.0 F08 A:1I21101 4.7 80.3 1.0 CB A:LEU686 4.8 94.3 1.0 CD1 A:LEU708 4.8 94.3 1.0

B.Zhang, T.Hu, X.Yang, F.Liu, Z.Rao. Cryo-Em Structure of Mycobacterium Smegmatis MMPL3 Complexed with ST004 in Lipid Nanodiscs To Be Published.