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Fluorine in PDB 8ayl: Resting State GLUA1/A2 Ampa Receptor in Complex with Tarp Gamma 8 and Ligand Jnj-61432059

Fluorine Binding Sites:

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Binding sites:

The binding sites of Fluorine atom in the Resting State GLUA1/A2 Ampa Receptor in Complex with Tarp Gamma 8 and Ligand Jnj-61432059 (pdb code 8ayl). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total 14 binding sites of Fluorine where determined in the Resting State GLUA1/A2 Ampa Receptor in Complex with Tarp Gamma 8 and Ligand Jnj-61432059, PDB code: 8ayl:
Jump to Fluorine binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Fluorine binding site 1 out of 14 in 8ayl

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Fluorine binding site 1 out of 14 in the Resting State GLUA1/A2 Ampa Receptor in Complex with Tarp Gamma 8 and Ligand Jnj-61432059


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Resting State GLUA1/A2 Ampa Receptor in Complex with Tarp Gamma 8 and Ligand Jnj-61432059 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:F901

b:60.1
occ:1.00
FAF B:ZK1901 0.0 60.1 1.0
CAZ B:ZK1901 1.4 60.1 1.0
FAG B:ZK1901 2.2 60.1 1.0
FAH B:ZK1901 2.2 60.1 1.0
CAS B:ZK1901 2.4 60.1 1.0
HAMA B:ZK1901 2.4 60.1 1.0
HG2 B:GLU402 3.1 68.8 1.0
CAR B:ZK1901 3.1 60.1 1.0
CAM B:ZK1901 3.2 60.1 1.0
HAM B:ZK1901 3.3 60.1 1.0
CAJ B:ZK1901 3.4 60.1 1.0
HAN B:ZK1901 3.4 60.1 1.0
NAX B:ZK1901 3.6 60.1 1.0
HE2 B:TYR405 3.6 66.4 1.0
HAJ B:ZK1901 3.7 60.1 1.0
HB2 B:MET708 3.8 58.5 1.0
CG B:GLU402 3.9 68.8 1.0
HG3 B:GLU402 3.9 68.8 1.0
CAN B:ZK1901 4.0 60.1 1.0
OE2 B:GLU402 4.1 68.8 1.0
CD B:GLU402 4.3 68.8 1.0
HE2 B:MET708 4.3 58.5 1.0
HALA B:ZK1901 4.3 60.1 1.0
HH B:TYR732 4.3 50.6 1.0
OH B:TYR732 4.4 50.6 1.0
HAK B:ZK1901 4.4 60.1 1.0
HB2 B:PRO478 4.4 62.6 1.0
CAK B:ZK1901 4.4 60.1 1.0
SD B:MET708 4.5 58.5 1.0
CAI B:ZK1901 4.5 60.1 1.0
CE2 B:TYR405 4.5 66.4 1.0
HD2 B:TYR405 4.6 66.4 1.0
CB B:MET708 4.7 58.5 1.0
CAV B:ZK1901 4.7 60.1 1.0
CAL B:ZK1901 4.7 60.1 1.0
HG2 B:MET708 4.7 58.5 1.0
HG3 B:PRO478 4.8 62.6 1.0
HANA B:ZK1901 4.8 60.1 1.0
CE B:MET708 4.8 58.5 1.0
HB2 B:GLU705 4.8 52.0 1.0
CG B:MET708 4.9 58.5 1.0
HH B:TYR405 4.9 66.4 1.0
HE1 B:MET708 5.0 58.5 1.0

Fluorine binding site 2 out of 14 in 8ayl

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Fluorine binding site 2 out of 14 in the Resting State GLUA1/A2 Ampa Receptor in Complex with Tarp Gamma 8 and Ligand Jnj-61432059


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 2 of Resting State GLUA1/A2 Ampa Receptor in Complex with Tarp Gamma 8 and Ligand Jnj-61432059 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:F901

b:60.1
occ:1.00
FAG B:ZK1901 0.0 60.1 1.0
CAZ B:ZK1901 1.4 60.1 1.0
FAF B:ZK1901 2.2 60.1 1.0
FAH B:ZK1901 2.2 60.1 1.0
OH B:TYR732 2.3 50.6 1.0
CAS B:ZK1901 2.4 60.1 1.0
HAJ B:ZK1901 2.4 60.1 1.0
CAJ B:ZK1901 2.5 60.1 1.0
HH B:TYR732 2.6 50.6 1.0
HB2 B:PRO478 3.0 62.6 1.0
CZ B:TYR732 3.1 50.6 1.0
HE2 B:TYR405 3.4 66.4 1.0
CAR B:ZK1901 3.6 60.1 1.0
CB B:PRO478 3.8 62.6 1.0
HE1 B:TYR732 3.8 50.6 1.0
CE1 B:TYR732 3.8 50.6 1.0
CAV B:ZK1901 3.8 60.1 1.0
CE2 B:TYR732 3.9 50.6 1.0
HB3 B:PRO478 3.9 62.6 1.0
HE2 B:TYR732 3.9 50.6 1.0
HAMA B:ZK1901 4.0 60.1 1.0
HAM B:ZK1901 4.1 60.1 1.0
CE2 B:TYR405 4.2 66.4 1.0
HH B:TYR405 4.2 66.4 1.0
OG1 B:THR707 4.3 53.6 1.0
O B:PRO478 4.4 62.6 1.0
CAM B:ZK1901 4.4 60.1 1.0
HG1 B:THR707 4.4 53.6 1.0
HG3 B:PRO478 4.4 62.6 1.0
HG2 B:GLU402 4.5 68.8 1.0
HG2 B:PRO478 4.5 62.6 1.0
CG B:PRO478 4.5 62.6 1.0
HNAP B:ZK1901 4.5 60.1 1.0
HG2 B:GLU705 4.6 52.0 1.0
CAI B:ZK1901 4.6 60.1 1.0
NAX B:ZK1901 4.6 60.1 1.0
NAP B:ZK1901 4.7 60.1 1.0
HB3 B:GLU705 4.7 52.0 1.0
CAW B:ZK1901 4.7 60.1 1.0
HB2 B:GLU705 4.7 52.0 1.0
OH B:TYR405 4.8 66.4 1.0
HD11 B:LEU498 4.8 46.7 1.0
HD2 B:TYR405 4.8 66.4 1.0
CZ B:TYR405 4.9 66.4 1.0
HD13 B:LEU498 4.9 46.7 1.0
CD2 B:TYR405 5.0 66.4 1.0
HB2 B:MET708 5.0 58.5 1.0
CD1 B:TYR732 5.0 50.6 1.0
CA B:PRO478 5.0 62.6 1.0

Fluorine binding site 3 out of 14 in 8ayl

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Fluorine binding site 3 out of 14 in the Resting State GLUA1/A2 Ampa Receptor in Complex with Tarp Gamma 8 and Ligand Jnj-61432059


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 3 of Resting State GLUA1/A2 Ampa Receptor in Complex with Tarp Gamma 8 and Ligand Jnj-61432059 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:F901

b:60.1
occ:1.00
FAH B:ZK1901 0.0 60.1 1.0
CAZ B:ZK1901 1.4 60.1 1.0
FAF B:ZK1901 2.2 60.1 1.0
FAG B:ZK1901 2.2 60.1 1.0
CAS B:ZK1901 2.4 60.1 1.0
HAJ B:ZK1901 2.4 60.1 1.0
CAJ B:ZK1901 2.5 60.1 1.0
HG2 B:GLU402 2.6 68.8 1.0
HB2 B:PRO478 2.6 62.6 1.0
HG3 B:PRO478 2.8 62.6 1.0
HG2 B:PRO478 2.9 62.6 1.0
CG B:PRO478 3.1 62.6 1.0
CB B:PRO478 3.2 62.6 1.0
HH B:TYR450 3.3 69.2 1.0
HE2 B:TYR405 3.4 66.4 1.0
OH B:TYR450 3.4 69.2 1.0
HB3 B:PRO478 3.5 62.6 1.0
CG B:GLU402 3.5 68.8 1.0
HD2 B:TYR405 3.6 66.4 1.0
CAR B:ZK1901 3.6 60.1 1.0
CAV B:ZK1901 3.8 60.1 1.0
HG3 B:GLU402 3.9 68.8 1.0
HB3 B:GLU402 4.0 68.8 1.0
CE2 B:TYR405 4.0 66.4 1.0
O B:PRO478 4.1 62.6 1.0
CD2 B:TYR405 4.1 66.4 1.0
HAN B:ZK1901 4.2 60.1 1.0
CB B:GLU402 4.2 68.8 1.0
HAMA B:ZK1901 4.3 60.1 1.0
CZ B:TYR450 4.4 69.2 1.0
CD B:GLU402 4.4 68.8 1.0
HB2 B:GLU402 4.4 68.8 1.0
OH B:TYR732 4.4 50.6 1.0
HNAP B:ZK1901 4.5 60.1 1.0
CA B:PRO478 4.5 62.6 1.0
HE1 B:TYR450 4.6 69.2 1.0
CD B:PRO478 4.6 62.6 1.0
CAI B:ZK1901 4.6 60.1 1.0
NAP B:ZK1901 4.6 60.1 1.0
NAX B:ZK1901 4.7 60.1 1.0
HH B:TYR732 4.7 50.6 1.0
CAW B:ZK1901 4.7 60.1 1.0
C B:PRO478 4.8 62.6 1.0
CE1 B:TYR450 4.8 69.2 1.0
CAM B:ZK1901 4.9 60.1 1.0
OE2 B:GLU402 4.9 68.8 1.0
CZ B:TYR732 4.9 50.6 1.0
CAN B:ZK1901 4.9 60.1 1.0
HD2 B:PRO478 5.0 62.6 1.0
HAM B:ZK1901 5.0 60.1 1.0
HD3 B:PRO478 5.0 62.6 1.0
OE1 B:GLU402 5.0 68.8 1.0

Fluorine binding site 4 out of 14 in 8ayl

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Fluorine binding site 4 out of 14 in the Resting State GLUA1/A2 Ampa Receptor in Complex with Tarp Gamma 8 and Ligand Jnj-61432059


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 4 of Resting State GLUA1/A2 Ampa Receptor in Complex with Tarp Gamma 8 and Ligand Jnj-61432059 within 5.0Å range:
probe atom residue distance (Å) B Occ
J:F501

b:22.8
occ:1.00
F1 J:OIJ501 0.0 22.8 1.0
C21 J:OIJ501 1.4 22.8 1.0
C20 J:OIJ501 2.4 22.8 1.0
C22 J:OIJ501 2.4 22.8 1.0
HG J:LEU210 3.0 26.7 1.0
HD21 J:LEU210 3.3 26.7 1.0
C23 J:OIJ501 3.6 22.8 1.0
C19 J:OIJ501 3.6 22.8 1.0
CG J:LEU210 3.8 26.7 1.0
CD2 J:LEU210 3.8 26.7 1.0
HB3 J:TYR206 3.8 24.6 1.0
HD23 J:LEU210 3.9 26.7 1.0
HD12 J:ILE213 4.0 27.3 1.0
O J:TYR206 4.1 24.6 1.0
C18 J:OIJ501 4.1 22.8 1.0
HD11 J:ILE213 4.2 27.3 1.0
HC1 A:PLM901 4.2 27.8 1.0
HD11 J:LEU210 4.2 26.7 1.0
HA J:TYR206 4.3 24.6 1.0
H J:LEU210 4.4 26.7 1.0
HA3 J:GLY209 4.4 25.2 1.0
HA J:LEU210 4.5 26.7 1.0
CD1 J:LEU210 4.5 26.7 1.0
N J:LEU210 4.5 26.7 1.0
HD1 J:TYR206 4.5 24.6 1.0
CD1 J:ILE213 4.5 27.3 1.0
HZ A:PHE527 4.5 20.6 1.0
HE1 A:PLM901 4.6 27.8 1.0
HD12 J:LEU210 4.7 26.7 1.0
CB J:TYR206 4.7 24.6 1.0
HA2 A:PLM901 4.7 27.8 1.0
HD22 J:LEU210 4.8 26.7 1.0
CA J:TYR206 4.8 24.6 1.0
C J:GLY209 4.8 25.2 1.0
CA J:LEU210 4.9 26.7 1.0
C J:TYR206 4.9 24.6 1.0
CB J:LEU210 4.9 26.7 1.0
HD13 J:ILE213 4.9 27.3 1.0

Fluorine binding site 5 out of 14 in 8ayl

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Fluorine binding site 5 out of 14 in the Resting State GLUA1/A2 Ampa Receptor in Complex with Tarp Gamma 8 and Ligand Jnj-61432059


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 5 of Resting State GLUA1/A2 Ampa Receptor in Complex with Tarp Gamma 8 and Ligand Jnj-61432059 within 5.0Å range:
probe atom residue distance (Å) B Occ
I:F501

b:22.7
occ:1.00
F1 I:OIJ501 0.0 22.7 1.0
C21 I:OIJ501 1.4 22.7 1.0
C20 I:OIJ501 2.4 22.7 1.0
C22 I:OIJ501 2.4 22.7 1.0
HG I:LEU210 3.0 26.6 1.0
HD21 I:LEU210 3.3 26.6 1.0
C23 I:OIJ501 3.6 22.7 1.0
C19 I:OIJ501 3.6 22.7 1.0
CG I:LEU210 3.8 26.6 1.0
CD2 I:LEU210 3.8 26.6 1.0
HB3 I:TYR206 3.8 24.4 1.0
HD23 I:LEU210 3.9 26.6 1.0
HD12 I:ILE213 4.0 27.1 1.0
O I:TYR206 4.1 24.4 1.0
C18 I:OIJ501 4.1 22.7 1.0
HD11 I:ILE213 4.2 27.1 1.0
HC1 C:PLM901 4.2 27.8 1.0
HD11 I:LEU210 4.2 26.6 1.0
HA I:TYR206 4.3 24.4 1.0
H I:LEU210 4.4 26.6 1.0
HA3 I:GLY209 4.4 25.1 1.0
HA I:LEU210 4.5 26.6 1.0
CD1 I:LEU210 4.5 26.6 1.0
N I:LEU210 4.5 26.6 1.0
HZ C:PHE527 4.5 20.8 1.0
HD1 I:TYR206 4.5 24.4 1.0
CD1 I:ILE213 4.5 27.1 1.0
HE1 C:PLM901 4.6 27.8 1.0
HD12 I:LEU210 4.7 26.6 1.0
CB I:TYR206 4.7 24.4 1.0
HA2 C:PLM901 4.7 27.8 1.0
HD22 I:LEU210 4.8 26.6 1.0
CA I:TYR206 4.8 24.4 1.0
C I:GLY209 4.8 25.1 1.0
CA I:LEU210 4.9 26.6 1.0
C I:TYR206 4.9 24.4 1.0
CB I:LEU210 4.9 26.6 1.0
HD13 I:ILE213 4.9 27.1 1.0

Fluorine binding site 6 out of 14 in 8ayl

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Fluorine binding site 6 out of 14 in the Resting State GLUA1/A2 Ampa Receptor in Complex with Tarp Gamma 8 and Ligand Jnj-61432059


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 6 of Resting State GLUA1/A2 Ampa Receptor in Complex with Tarp Gamma 8 and Ligand Jnj-61432059 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F902

b:54.9
occ:1.00
FAF A:ZK1902 0.0 54.9 1.0
CAZ A:ZK1902 1.4 54.9 1.0
FAG A:ZK1902 2.2 54.9 1.0
FAH A:ZK1902 2.2 54.9 1.0
HAJ A:ZK1902 2.3 54.9 1.0
CAS A:ZK1902 2.4 54.9 1.0
CAJ A:ZK1902 2.5 54.9 1.0
HG2 A:GLU398 2.6 53.6 1.0
HG3 A:PRO474 2.6 42.7 1.0
HH A:TYR446 2.8 56.3 1.0
HG3 A:GLU398 2.8 53.6 1.0
HG2 A:PRO474 2.9 42.7 1.0
CG A:PRO474 3.1 42.7 1.0
CG A:GLU398 3.1 53.6 1.0
HB2 A:PRO474 3.1 42.7 1.0
OH A:TYR446 3.2 56.3 1.0
HE1 A:TYR401 3.4 47.1 1.0
CB A:PRO474 3.5 42.7 1.0
HB3 A:GLU398 3.5 53.6 1.0
CAR A:ZK1902 3.6 54.9 1.0
HD1 A:TYR401 3.7 47.1 1.0
HB3 A:PRO474 3.7 42.7 1.0
CE1 A:TYR401 3.8 47.1 1.0
CAV A:ZK1902 3.8 54.9 1.0
CB A:GLU398 3.9 53.6 1.0
CD1 A:TYR401 3.9 47.1 1.0
HE3 A:MET704 3.9 51.5 1.0
HE2 A:TYR446 4.1 56.3 1.0
HB2 A:GLU398 4.2 53.6 1.0
CZ A:TYR446 4.2 56.3 1.0
CD A:GLU398 4.3 53.6 1.0
HNAP A:ZK1902 4.4 54.9 1.0
CD A:PRO474 4.5 42.7 1.0
CE2 A:TYR446 4.5 56.3 1.0
HH A:TYR728 4.6 36.8 1.0
NAP A:ZK1902 4.6 54.9 1.0
CAI A:ZK1902 4.6 54.9 1.0
NAX A:ZK1902 4.6 54.9 1.0
CAW A:ZK1902 4.7 54.9 1.0
OH A:TYR728 4.7 36.8 1.0
HD2 A:PRO474 4.7 42.7 1.0
CZ A:TYR401 4.7 47.1 1.0
HD3 A:PRO474 4.8 42.7 1.0
HAMA A:ZK1902 4.8 54.9 1.0
OE2 A:GLU398 4.8 53.6 1.0
CE A:MET704 4.9 51.5 1.0
O A:PRO474 4.9 42.7 1.0
CA A:PRO474 4.9 42.7 1.0
HH A:TYR401 4.9 47.1 1.0
CG A:TYR401 5.0 47.1 1.0

Fluorine binding site 7 out of 14 in 8ayl

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Fluorine binding site 7 out of 14 in the Resting State GLUA1/A2 Ampa Receptor in Complex with Tarp Gamma 8 and Ligand Jnj-61432059


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 7 of Resting State GLUA1/A2 Ampa Receptor in Complex with Tarp Gamma 8 and Ligand Jnj-61432059 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F902

b:54.9
occ:1.00
FAG A:ZK1902 0.0 54.9 1.0
CAZ A:ZK1902 1.4 54.9 1.0
FAF A:ZK1902 2.2 54.9 1.0
FAH A:ZK1902 2.2 54.9 1.0
CAS A:ZK1902 2.3 54.9 1.0
HE3 A:MET704 2.4 51.5 1.0
HG2 A:GLU398 2.9 53.6 1.0
HG3 A:GLU398 2.9 53.6 1.0
HG2 A:MET704 3.0 51.5 1.0
CAR A:ZK1902 3.1 54.9 1.0
CE A:MET704 3.3 51.5 1.0
CG A:GLU398 3.3 53.6 1.0
HE1 A:TYR401 3.3 47.1 1.0
CAJ A:ZK1902 3.4 54.9 1.0
NAX A:ZK1902 3.4 54.9 1.0
CG A:MET704 3.6 51.5 1.0
SD A:MET704 3.6 51.5 1.0
HG3 A:MET704 3.7 51.5 1.0
HAJ A:ZK1902 3.7 54.9 1.0
HE1 A:MET704 3.8 51.5 1.0
CD A:GLU398 3.8 53.6 1.0
HE2 A:MET704 3.9 51.5 1.0
HAM A:ZK1902 4.0 54.9 1.0
OE2 A:GLU398 4.1 53.6 1.0
CAM A:ZK1902 4.1 54.9 1.0
HAMA A:ZK1902 4.1 54.9 1.0
CE1 A:TYR401 4.1 47.1 1.0
HANA A:ZK1902 4.2 54.9 1.0
CAN A:ZK1902 4.3 54.9 1.0
HD1 A:TYR401 4.3 47.1 1.0
HAN A:ZK1902 4.4 54.9 1.0
CAI A:ZK1902 4.4 54.9 1.0
HH A:TYR446 4.5 56.3 1.0
OE1 A:GLU398 4.5 53.6 1.0
HG3 A:PRO474 4.5 42.7 1.0
HH A:TYR728 4.5 36.8 1.0
OH A:TYR446 4.6 56.3 1.0
CD1 A:TYR401 4.7 47.1 1.0
CB A:GLU398 4.7 53.6 1.0
CAV A:ZK1902 4.7 54.9 1.0
HH A:TYR401 4.7 47.1 1.0
HB3 A:GLU398 4.7 53.6 1.0
OG1 A:THR703 4.8 46.0 1.0
OH A:TYR728 4.9 36.8 1.0
HB2 A:PRO474 4.9 42.7 1.0
HAI A:ZK1902 5.0 54.9 1.0
O A:ASP399 5.0 53.8 1.0
CB A:MET704 5.0 51.5 1.0

Fluorine binding site 8 out of 14 in 8ayl

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Fluorine binding site 8 out of 14 in the Resting State GLUA1/A2 Ampa Receptor in Complex with Tarp Gamma 8 and Ligand Jnj-61432059


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 8 of Resting State GLUA1/A2 Ampa Receptor in Complex with Tarp Gamma 8 and Ligand Jnj-61432059 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F902

b:54.9
occ:1.00
FAH A:ZK1902 0.0 54.9 1.0
CAZ A:ZK1902 1.4 54.9 1.0
FAG A:ZK1902 2.2 54.9 1.0
FAF A:ZK1902 2.2 54.9 1.0
CAS A:ZK1902 2.4 54.9 1.0
HH A:TYR728 2.5 36.8 1.0
HAJ A:ZK1902 2.6 54.9 1.0
CAJ A:ZK1902 2.6 54.9 1.0
OH A:TYR728 2.8 36.8 1.0
HE1 A:TYR401 3.1 47.1 1.0
HB2 A:PRO474 3.3 42.7 1.0
HE3 A:MET704 3.4 51.5 1.0
CAR A:ZK1902 3.6 54.9 1.0
HE2 A:TYR728 3.6 36.8 1.0
CZ A:TYR728 3.6 36.8 1.0
HH A:TYR401 3.6 47.1 1.0
HB3 A:PRO474 3.6 42.7 1.0
CE1 A:TYR401 3.7 47.1 1.0
HG3 A:PRO474 3.8 42.7 1.0
CB A:PRO474 3.8 42.7 1.0
CE2 A:TYR728 3.9 36.8 1.0
CAV A:ZK1902 3.9 54.9 1.0
OG1 A:THR703 3.9 46.0 1.0
OH A:TYR401 4.0 47.1 1.0
HG2 A:MET704 4.1 51.5 1.0
HG1 A:THR703 4.1 46.0 1.0
CG A:PRO474 4.2 42.7 1.0
CZ A:TYR401 4.2 47.1 1.0
HG2 A:PRO474 4.3 42.7 1.0
CE A:MET704 4.3 51.5 1.0
HG2 A:GLU398 4.4 53.6 1.0
HG3 A:GLU398 4.4 53.6 1.0
NAX A:ZK1902 4.5 54.9 1.0
CD1 A:TYR401 4.5 47.1 1.0
HE2 A:MET704 4.6 51.5 1.0
CAI A:ZK1902 4.6 54.9 1.0
HD1 A:TYR401 4.6 47.1 1.0
CE1 A:TYR728 4.6 36.8 1.0
HNAP A:ZK1902 4.6 54.9 1.0
HAN A:ZK1902 4.7 54.9 1.0
CAW A:ZK1902 4.7 54.9 1.0
NAP A:ZK1902 4.8 54.9 1.0
HE1 A:TYR728 4.8 36.8 1.0
HH A:TYR446 4.8 56.3 1.0
HE1 A:MET704 4.9 51.5 1.0
CG A:GLU398 4.9 53.6 1.0
CG A:MET704 4.9 51.5 1.0
HD13 A:LEU494 4.9 38.7 1.0

Fluorine binding site 9 out of 14 in 8ayl

Go back to Fluorine Binding Sites List in 8ayl
Fluorine binding site 9 out of 14 in the Resting State GLUA1/A2 Ampa Receptor in Complex with Tarp Gamma 8 and Ligand Jnj-61432059


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 9 of Resting State GLUA1/A2 Ampa Receptor in Complex with Tarp Gamma 8 and Ligand Jnj-61432059 within 5.0Å range:
probe atom residue distance (Å) B Occ
D:F901

b:60.0
occ:1.00
FAF D:ZK1901 0.0 60.0 1.0
CAZ D:ZK1901 1.4 60.0 1.0
FAG D:ZK1901 2.2 60.0 1.0
FAH D:ZK1901 2.2 60.0 1.0
CAS D:ZK1901 2.4 60.0 1.0
HAMA D:ZK1901 2.4 60.0 1.0
HG2 D:GLU402 3.1 69.0 1.0
CAR D:ZK1901 3.1 60.0 1.0
CAM D:ZK1901 3.2 60.0 1.0
HAM D:ZK1901 3.3 60.0 1.0
CAJ D:ZK1901 3.4 60.0 1.0
HAN D:ZK1901 3.5 60.0 1.0
NAX D:ZK1901 3.6 60.0 1.0
HE2 D:TYR405 3.6 66.5 1.0
HAJ D:ZK1901 3.7 60.0 1.0
HB2 D:MET708 3.8 58.4 1.0
CG D:GLU402 3.9 69.0 1.0
HG3 D:GLU402 3.9 69.0 1.0
CAN D:ZK1901 4.0 60.0 1.0
OE2 D:GLU402 4.1 69.0 1.0
CD D:GLU402 4.3 69.0 1.0
HE2 D:MET708 4.3 58.4 1.0
HALA D:ZK1901 4.3 60.0 1.0
HH D:TYR732 4.3 50.2 1.0
OH D:TYR732 4.3 50.2 1.0
HAK D:ZK1901 4.4 60.0 1.0
HB2 D:PRO478 4.4 62.7 1.0
CAK D:ZK1901 4.4 60.0 1.0
SD D:MET708 4.5 58.4 1.0
CAI D:ZK1901 4.5 60.0 1.0
CE2 D:TYR405 4.5 66.5 1.0
HD2 D:TYR405 4.6 66.5 1.0
CB D:MET708 4.7 58.4 1.0
CAV D:ZK1901 4.7 60.0 1.0
CAL D:ZK1901 4.7 60.0 1.0
HG2 D:MET708 4.7 58.4 1.0
HG3 D:PRO478 4.8 62.7 1.0
HANA D:ZK1901 4.8 60.0 1.0
CE D:MET708 4.8 58.4 1.0
HB2 D:GLU705 4.8 51.7 1.0
CG D:MET708 4.9 58.4 1.0
HH D:TYR405 4.9 66.5 1.0

Fluorine binding site 10 out of 14 in 8ayl

Go back to Fluorine Binding Sites List in 8ayl
Fluorine binding site 10 out of 14 in the Resting State GLUA1/A2 Ampa Receptor in Complex with Tarp Gamma 8 and Ligand Jnj-61432059


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 10 of Resting State GLUA1/A2 Ampa Receptor in Complex with Tarp Gamma 8 and Ligand Jnj-61432059 within 5.0Å range:
probe atom residue distance (Å) B Occ
D:F901

b:60.0
occ:1.00
FAG D:ZK1901 0.0 60.0 1.0
CAZ D:ZK1901 1.4 60.0 1.0
FAF D:ZK1901 2.2 60.0 1.0
FAH D:ZK1901 2.2 60.0 1.0
OH D:TYR732 2.3 50.2 1.0
CAS D:ZK1901 2.4 60.0 1.0
HAJ D:ZK1901 2.4 60.0 1.0
CAJ D:ZK1901 2.5 60.0 1.0
HH D:TYR732 2.6 50.2 1.0
HB2 D:PRO478 3.0 62.7 1.0
CZ D:TYR732 3.1 50.2 1.0
HE2 D:TYR405 3.4 66.5 1.0
CAR D:ZK1901 3.6 60.0 1.0
CB D:PRO478 3.8 62.7 1.0
HE1 D:TYR732 3.8 50.2 1.0
CE1 D:TYR732 3.8 50.2 1.0
CAV D:ZK1901 3.8 60.0 1.0
CE2 D:TYR732 3.9 50.2 1.0
HE2 D:TYR732 3.9 50.2 1.0
HB3 D:PRO478 3.9 62.7 1.0
HAMA D:ZK1901 4.0 60.0 1.0
HAM D:ZK1901 4.1 60.0 1.0
CE2 D:TYR405 4.2 66.5 1.0
HH D:TYR405 4.2 66.5 1.0
OG1 D:THR707 4.3 53.3 1.0
O D:PRO478 4.4 62.7 1.0
CAM D:ZK1901 4.4 60.0 1.0
HG1 D:THR707 4.4 53.3 1.0
HG3 D:PRO478 4.4 62.7 1.0
HG2 D:GLU402 4.5 69.0 1.0
HG2 D:PRO478 4.5 62.7 1.0
CG D:PRO478 4.5 62.7 1.0
HNAP D:ZK1901 4.5 60.0 1.0
HG2 D:GLU705 4.6 51.7 1.0
CAI D:ZK1901 4.6 60.0 1.0
NAX D:ZK1901 4.6 60.0 1.0
NAP D:ZK1901 4.7 60.0 1.0
HB3 D:GLU705 4.7 51.7 1.0
CAW D:ZK1901 4.7 60.0 1.0
HB2 D:GLU705 4.7 51.7 1.0
OH D:TYR405 4.8 66.5 1.0
HD11 D:LEU498 4.8 46.4 1.0
HD2 D:TYR405 4.8 66.5 1.0
CZ D:TYR405 4.9 66.5 1.0
HD13 D:LEU498 4.9 46.4 1.0
CD2 D:TYR405 5.0 66.5 1.0
HB2 D:MET708 5.0 58.4 1.0
CD1 D:TYR732 5.0 50.2 1.0
CA D:PRO478 5.0 62.7 1.0

Reference:

D.Zhang, R.Lape, S.A.Shaikh, B.K.Kohegyi, J.F.Watson, O.Cais, T.Nakagawa, I.H.Greger. Modulatory Mechanisms of Tarp Gamma 8-Selective Ampa Receptor Therapeutics. Nat Commun V. 14 1659 2023.
ISSN: ESSN 2041-1723
PubMed: 36966141
DOI: 10.1038/S41467-023-37259-5
Page generated: Wed Jul 16 02:43:14 2025

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