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Fluorine in PDB 8eio: The Complex of Phosphorylated Human Delta F508 Cystic Fibrosis Transmembrane Conductance Regulator (Cftr) with Elexacaftor (Vx-445), Lumacaftor (Vx-809) and Atp/Mg

Enzymatic activity of The Complex of Phosphorylated Human Delta F508 Cystic Fibrosis Transmembrane Conductance Regulator (Cftr) with Elexacaftor (Vx-445), Lumacaftor (Vx-809) and Atp/Mg

All present enzymatic activity of The Complex of Phosphorylated Human Delta F508 Cystic Fibrosis Transmembrane Conductance Regulator (Cftr) with Elexacaftor (Vx-445), Lumacaftor (Vx-809) and Atp/Mg:
5.6.1.6;

Other elements in 8eio:

The structure of The Complex of Phosphorylated Human Delta F508 Cystic Fibrosis Transmembrane Conductance Regulator (Cftr) with Elexacaftor (Vx-445), Lumacaftor (Vx-809) and Atp/Mg also contains other interesting chemical elements:

Magnesium (Mg) 2 atoms

Fluorine Binding Sites:

The binding sites of Fluorine atom in the The Complex of Phosphorylated Human Delta F508 Cystic Fibrosis Transmembrane Conductance Regulator (Cftr) with Elexacaftor (Vx-445), Lumacaftor (Vx-809) and Atp/Mg (pdb code 8eio). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total 5 binding sites of Fluorine where determined in the The Complex of Phosphorylated Human Delta F508 Cystic Fibrosis Transmembrane Conductance Regulator (Cftr) with Elexacaftor (Vx-445), Lumacaftor (Vx-809) and Atp/Mg, PDB code: 8eio:
Jump to Fluorine binding site number: 1; 2; 3; 4; 5;

Fluorine binding site 1 out of 5 in 8eio

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Fluorine binding site 1 out of 5 in the The Complex of Phosphorylated Human Delta F508 Cystic Fibrosis Transmembrane Conductance Regulator (Cftr) with Elexacaftor (Vx-445), Lumacaftor (Vx-809) and Atp/Mg


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of The Complex of Phosphorylated Human Delta F508 Cystic Fibrosis Transmembrane Conductance Regulator (Cftr) with Elexacaftor (Vx-445), Lumacaftor (Vx-809) and Atp/Mg within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F1507

b:60.8
occ:1.00
F1 A:VX81507 0.0 60.8 1.0
C20 A:VX81507 1.4 60.0 1.0
F2 A:VX81507 2.2 60.6 1.0
O5 A:VX81507 2.3 62.3 1.0
O4 A:VX81507 2.3 59.6 1.0
OG A:SER364 3.1 47.8 1.0
C16 A:VX81507 3.2 58.0 1.0
C17 A:VX81507 3.2 60.4 1.0
CD1 A:LEU195 3.6 54.5 1.0
CB A:SER364 3.8 41.6 1.0
CG2 A:THR360 3.9 30.1 1.0
CG A:LEU195 4.0 47.7 1.0
CB A:ALA198 4.2 34.9 1.0
CA A:LEU195 4.3 39.0 1.0
N A:LEU195 4.3 34.7 1.0
C A:GLY194 4.3 44.1 1.0
O A:GLY194 4.4 51.9 1.0
C15 A:VX81507 4.4 59.2 1.0
C18 A:VX81507 4.4 57.5 1.0
CB A:LEU195 4.8 40.0 1.0
CA A:GLY194 4.9 43.1 1.0
O A:THR360 4.9 35.4 1.0

Fluorine binding site 2 out of 5 in 8eio

Go back to Fluorine Binding Sites List in 8eio
Fluorine binding site 2 out of 5 in the The Complex of Phosphorylated Human Delta F508 Cystic Fibrosis Transmembrane Conductance Regulator (Cftr) with Elexacaftor (Vx-445), Lumacaftor (Vx-809) and Atp/Mg


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 2 of The Complex of Phosphorylated Human Delta F508 Cystic Fibrosis Transmembrane Conductance Regulator (Cftr) with Elexacaftor (Vx-445), Lumacaftor (Vx-809) and Atp/Mg within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F1507

b:60.6
occ:1.00
F2 A:VX81507 0.0 60.6 1.0
C20 A:VX81507 1.4 60.0 1.0
F1 A:VX81507 2.2 60.8 1.0
O4 A:VX81507 2.3 59.6 1.0
O5 A:VX81507 2.3 62.3 1.0
C16 A:VX81507 3.3 58.0 1.0
C17 A:VX81507 3.3 60.4 1.0
CD2 A:TRP361 3.3 37.1 1.0
CB A:ALA198 3.5 34.9 1.0
CE2 A:TRP361 3.5 35.3 1.0
CE3 A:TRP361 3.5 39.8 1.0
CG A:TRP361 3.8 28.4 1.0
CG2 A:THR360 3.8 30.1 1.0
OG A:SER364 3.8 47.8 1.0
CZ3 A:TRP361 3.9 39.6 1.0
CZ2 A:TRP361 3.9 35.5 1.0
CA A:TRP361 4.0 26.6 1.0
NE1 A:TRP361 4.0 42.7 1.0
CB A:SER364 4.1 41.6 1.0
CH2 A:TRP361 4.1 42.4 1.0
CD1 A:TRP361 4.1 33.9 1.0
N A:TRP361 4.2 33.3 1.0
O A:THR360 4.2 35.4 1.0
C A:THR360 4.3 28.9 1.0
CB A:TRP361 4.5 28.5 1.0
CA A:ALA198 4.5 28.2 1.0
C15 A:VX81507 4.6 59.2 1.0
C18 A:VX81507 4.6 57.5 1.0
CB A:THR360 4.7 29.1 1.0

Fluorine binding site 3 out of 5 in 8eio

Go back to Fluorine Binding Sites List in 8eio
Fluorine binding site 3 out of 5 in the The Complex of Phosphorylated Human Delta F508 Cystic Fibrosis Transmembrane Conductance Regulator (Cftr) with Elexacaftor (Vx-445), Lumacaftor (Vx-809) and Atp/Mg


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 3 of The Complex of Phosphorylated Human Delta F508 Cystic Fibrosis Transmembrane Conductance Regulator (Cftr) with Elexacaftor (Vx-445), Lumacaftor (Vx-809) and Atp/Mg within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F1508

b:67.7
occ:1.00
F A:WJX1508 0.0 67.7 1.0
C17 A:WJX1508 1.3 68.0 1.0
F2 A:WJX1508 2.1 68.2 1.0
F1 A:WJX1508 2.1 69.9 1.0
C14 A:WJX1508 2.4 65.4 1.0
C15 A:WJX1508 2.7 59.4 1.0
CD1 A:ILE132 2.8 48.9 1.0
C16 A:WJX1508 3.2 59.9 1.0
C13 A:WJX1508 3.6 65.3 1.0
CG1 A:ILE132 4.1 49.4 1.0
CG2 A:ILE132 4.3 44.1 1.0
O A:WJX1508 4.7 65.5 1.0
CB A:ILE132 4.8 44.1 1.0

Fluorine binding site 4 out of 5 in 8eio

Go back to Fluorine Binding Sites List in 8eio
Fluorine binding site 4 out of 5 in the The Complex of Phosphorylated Human Delta F508 Cystic Fibrosis Transmembrane Conductance Regulator (Cftr) with Elexacaftor (Vx-445), Lumacaftor (Vx-809) and Atp/Mg


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 4 of The Complex of Phosphorylated Human Delta F508 Cystic Fibrosis Transmembrane Conductance Regulator (Cftr) with Elexacaftor (Vx-445), Lumacaftor (Vx-809) and Atp/Mg within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F1508

b:69.9
occ:1.00
F1 A:WJX1508 0.0 69.9 1.0
C17 A:WJX1508 1.3 68.0 1.0
F A:WJX1508 2.1 67.7 1.0
F2 A:WJX1508 2.1 68.2 1.0
C14 A:WJX1508 2.4 65.4 1.0
C13 A:WJX1508 2.6 65.3 1.0
C15 A:WJX1508 3.2 59.4 1.0
C16 A:WJX1508 3.7 59.9 1.0
O A:WJX1508 4.0 65.5 1.0
CD1 A:ILE132 4.7 48.9 1.0
CE1 A:PHE16 4.9 49.3 1.0
CZ A:PHE16 4.9 51.0 1.0
C12 A:WJX1508 4.9 59.4 1.0

Fluorine binding site 5 out of 5 in 8eio

Go back to Fluorine Binding Sites List in 8eio
Fluorine binding site 5 out of 5 in the The Complex of Phosphorylated Human Delta F508 Cystic Fibrosis Transmembrane Conductance Regulator (Cftr) with Elexacaftor (Vx-445), Lumacaftor (Vx-809) and Atp/Mg


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 5 of The Complex of Phosphorylated Human Delta F508 Cystic Fibrosis Transmembrane Conductance Regulator (Cftr) with Elexacaftor (Vx-445), Lumacaftor (Vx-809) and Atp/Mg within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F1508

b:68.2
occ:1.00
F2 A:WJX1508 0.0 68.2 1.0
C17 A:WJX1508 1.3 68.0 1.0
F A:WJX1508 2.1 67.7 1.0
F1 A:WJX1508 2.1 69.9 1.0
C14 A:WJX1508 2.4 65.4 1.0
C16 A:WJX1508 2.7 59.9 1.0
C13 A:WJX1508 3.1 65.3 1.0
CD1 A:ILE132 3.4 48.9 1.0
C15 A:WJX1508 3.7 59.4 1.0
O A:WJX1508 4.5 65.5 1.0
CG2 A:ILE132 4.5 44.1 1.0
CG A:MET1105 4.7 50.9 1.0
CG1 A:ILE132 4.8 49.4 1.0
CE A:MET1105 4.9 51.4 1.0

Reference:

K.Fiedorczuk, J.Chen. Molecular Structures Reveal Synergistic Rescue of Delta 508 Cftr By Trikafta Modulators. Science V. 378 284 2022.
ISSN: ESSN 1095-9203
PubMed: 36264792
DOI: 10.1126/SCIENCE.ADE2216
Page generated: Wed Jul 16 03:55:30 2025

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