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Fluorine in PDB 8qmb: Nucleant-Assisted 2.0 A Resolution Structure of the Streptococcus Pneumoniae Topoisomerase IV-V18MER Dna Complex with the Novel Fluoroquinolone Delafloxacin
Enzymatic activity of Nucleant-Assisted 2.0 A Resolution Structure of the Streptococcus Pneumoniae Topoisomerase IV-V18MER Dna Complex with the Novel Fluoroquinolone Delafloxacin
All present enzymatic activity of Nucleant-Assisted 2.0 A Resolution Structure of the Streptococcus Pneumoniae Topoisomerase IV-V18MER Dna Complex with the Novel Fluoroquinolone Delafloxacin:
5.6.2.2;
5.6.2.2;
Protein crystallography data
The structure of Nucleant-Assisted 2.0 A Resolution Structure of the Streptococcus Pneumoniae Topoisomerase IV-V18MER Dna Complex with the Novel Fluoroquinolone Delafloxacin, PDB code: 8qmb
was solved by
S.Najmudin,
X.S.Pan,
B.Wang,
N.E.Chayen,
L.M.Fisher,
M.R.Sanderson,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 83.63 / 2.00 |
| Space group | P 31 2 1 |
| Cell size a, b, c (Å), α, β, γ (°) | 157.215, 157.215, 211.948, 90, 90, 120 |
| R / Rfree (%) | 16.9 / 20.6 |
Other elements in 8qmb:
The structure of Nucleant-Assisted 2.0 A Resolution Structure of the Streptococcus Pneumoniae Topoisomerase IV-V18MER Dna Complex with the Novel Fluoroquinolone Delafloxacin also contains other interesting chemical elements:
| Chlorine | (Cl) | 4 atoms |
| Magnesium | (Mg) | 6 atoms |
Fluorine Binding Sites:
The binding sites of Fluorine atom in the Nucleant-Assisted 2.0 A Resolution Structure of the Streptococcus Pneumoniae Topoisomerase IV-V18MER Dna Complex with the Novel Fluoroquinolone Delafloxacin
(pdb code 8qmb). This binding sites where shown within
5.0 Angstroms radius around Fluorine atom.
In total 6 binding sites of Fluorine where determined in the Nucleant-Assisted 2.0 A Resolution Structure of the Streptococcus Pneumoniae Topoisomerase IV-V18MER Dna Complex with the Novel Fluoroquinolone Delafloxacin, PDB code: 8qmb:
Jump to Fluorine binding site number: 1; 2; 3; 4; 5; 6;
In total 6 binding sites of Fluorine where determined in the Nucleant-Assisted 2.0 A Resolution Structure of the Streptococcus Pneumoniae Topoisomerase IV-V18MER Dna Complex with the Novel Fluoroquinolone Delafloxacin, PDB code: 8qmb:
Jump to Fluorine binding site number: 1; 2; 3; 4; 5; 6;
Fluorine binding site 1 out of 6 in 8qmb
Go back to
Fluorine Binding Sites List in 8qmb
Fluorine binding site 1 out
of 6 in the Nucleant-Assisted 2.0 A Resolution Structure of the Streptococcus Pneumoniae Topoisomerase IV-V18MER Dna Complex with the Novel Fluoroquinolone Delafloxacin
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Fluorine with other atoms in the F binding
site number 1 of Nucleant-Assisted 2.0 A Resolution Structure of the Streptococcus Pneumoniae Topoisomerase IV-V18MER Dna Complex with the Novel Fluoroquinolone Delafloxacin within 5.0Å range:
|
Fluorine binding site 2 out of 6 in 8qmb
Go back to
Fluorine Binding Sites List in 8qmb
Fluorine binding site 2 out
of 6 in the Nucleant-Assisted 2.0 A Resolution Structure of the Streptococcus Pneumoniae Topoisomerase IV-V18MER Dna Complex with the Novel Fluoroquinolone Delafloxacin
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Fluorine with other atoms in the F binding
site number 2 of Nucleant-Assisted 2.0 A Resolution Structure of the Streptococcus Pneumoniae Topoisomerase IV-V18MER Dna Complex with the Novel Fluoroquinolone Delafloxacin within 5.0Å range:
|
Fluorine binding site 3 out of 6 in 8qmb
Go back to
Fluorine Binding Sites List in 8qmb
Fluorine binding site 3 out
of 6 in the Nucleant-Assisted 2.0 A Resolution Structure of the Streptococcus Pneumoniae Topoisomerase IV-V18MER Dna Complex with the Novel Fluoroquinolone Delafloxacin
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Fluorine with other atoms in the F binding
site number 3 of Nucleant-Assisted 2.0 A Resolution Structure of the Streptococcus Pneumoniae Topoisomerase IV-V18MER Dna Complex with the Novel Fluoroquinolone Delafloxacin within 5.0Å range:
|
Fluorine binding site 4 out of 6 in 8qmb
Go back to
Fluorine Binding Sites List in 8qmb
Fluorine binding site 4 out
of 6 in the Nucleant-Assisted 2.0 A Resolution Structure of the Streptococcus Pneumoniae Topoisomerase IV-V18MER Dna Complex with the Novel Fluoroquinolone Delafloxacin
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Fluorine with other atoms in the F binding
site number 4 of Nucleant-Assisted 2.0 A Resolution Structure of the Streptococcus Pneumoniae Topoisomerase IV-V18MER Dna Complex with the Novel Fluoroquinolone Delafloxacin within 5.0Å range:
|
Fluorine binding site 5 out of 6 in 8qmb
Go back to
Fluorine Binding Sites List in 8qmb
Fluorine binding site 5 out
of 6 in the Nucleant-Assisted 2.0 A Resolution Structure of the Streptococcus Pneumoniae Topoisomerase IV-V18MER Dna Complex with the Novel Fluoroquinolone Delafloxacin
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Fluorine with other atoms in the F binding
site number 5 of Nucleant-Assisted 2.0 A Resolution Structure of the Streptococcus Pneumoniae Topoisomerase IV-V18MER Dna Complex with the Novel Fluoroquinolone Delafloxacin within 5.0Å range:
|
Fluorine binding site 6 out of 6 in 8qmb
Go back to
Fluorine Binding Sites List in 8qmb
Fluorine binding site 6 out
of 6 in the Nucleant-Assisted 2.0 A Resolution Structure of the Streptococcus Pneumoniae Topoisomerase IV-V18MER Dna Complex with the Novel Fluoroquinolone Delafloxacin
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Fluorine with other atoms in the F binding
site number 6 of Nucleant-Assisted 2.0 A Resolution Structure of the Streptococcus Pneumoniae Topoisomerase IV-V18MER Dna Complex with the Novel Fluoroquinolone Delafloxacin within 5.0Å range:
|
Reference:
S.Najmudin,
X.S.Pan,
B.Wang,
N.E.Chayen,
L.M.Fisher,
M.R.Sanderson.
The Nature of the Molecular Interactions at High Resolution of the Streptococcus Pneumoniae Topoisomerase IV-Dna Complex with the Novel Fluoroquinolone Delafloxacin. To Be Published.
Page generated: Wed Jul 16 06:54:33 2025
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