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Fluorine in PDB 8x69: Complex Structure of Athppd with YH23010

Enzymatic activity of Complex Structure of Athppd with YH23010

All present enzymatic activity of Complex Structure of Athppd with YH23010:
1.13.11.27;

Protein crystallography data

The structure of Complex Structure of Athppd with YH23010, PDB code: 8x69 was solved by G.-F.Yang, H.-Y.Lin, J.Dong, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.17 / 1.80
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 76.792, 83.448, 61.663, 90, 101.92, 90
R / Rfree (%) 18.2 / 21.6

Other elements in 8x69:

The structure of Complex Structure of Athppd with YH23010 also contains other interesting chemical elements:

Cobalt (Co) 1 atom

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Complex Structure of Athppd with YH23010 (pdb code 8x69). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total only one binding site of Fluorine was determined in the Complex Structure of Athppd with YH23010, PDB code: 8x69:

Fluorine binding site 1 out of 1 in 8x69

Go back to Fluorine Binding Sites List in 8x69
Fluorine binding site 1 out of 1 in the Complex Structure of Athppd with YH23010


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Complex Structure of Athppd with YH23010 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F502

b:38.8
occ:1.00
F28 A:YDF502 0.0 38.8 1.0
C27 A:YDF502 1.4 37.9 1.0
C24 A:YDF502 2.5 39.7 1.0
N10 A:YDF502 2.8 46.3 1.0
C09 A:YDF502 3.3 56.9 1.0
O23 A:YDF502 3.3 41.0 1.0
C11 A:YDF502 3.3 42.0 1.0
CG A:MET335 3.7 30.2 1.0
CB A:PHE381 3.7 21.8 1.0
O A:HOH680 3.9 30.5 1.0
CE A:MET335 3.9 35.4 1.0
CG A:PHE381 4.0 23.1 1.0
CE2 A:PHE392 4.2 22.8 1.0
SD A:MET335 4.2 36.4 1.0
CD2 A:PHE381 4.3 23.7 1.0
C05 A:YDF502 4.3 36.1 1.0
C08 A:YDF502 4.4 54.7 1.0
CZ A:PHE392 4.4 22.3 1.0
CD2 A:PHE392 4.5 21.9 1.0
CD1 A:PHE381 4.6 24.8 1.0
O A:HOH747 4.7 45.6 1.0
O A:HOH736 4.8 34.4 1.0
CB A:MET335 4.8 31.5 1.0
O A:THR382 4.9 21.5 1.0
CE1 A:PHE392 4.9 24.9 1.0

Reference:

G.-F.Yang, H.-Y.Lin, J.Dong. Complex Structure of Athppd with YH23010 To Be Published.
Page generated: Wed Jul 16 10:11:16 2025

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