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Fluorine in PDB, part 247 (files: 9841-9880), PDB 8smc-8t4v

Experimental structures of coordination spheres of Fluorine (F) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Fluorine atoms. PDB files: 9841-9880 (PDB 8smc-8t4v).
  1. 8smc (F: 3) - Cryo-Em Structure of LRRK2 Bound with Type-I Inhibitor DNL201
  2. 8son (F: 6) - Crystal Structure of Macrophage Migration Inhibitory Factor in Complex with N-[3-(Trifluoromethyl)Phenyl]-3-(2-Chloroanilino)-2-Cyano-3- Thioxopropanamide
    Other atoms: Cl (2);
  3. 8sqw (F: 9) - Particulate Methane Monooxygenase Crosslinked with 2,2,2- Trifluoroethanol Bound
    Other atoms: Cu (9);
  4. 8sr1 (F: 9) - Particulate Methane Monooxygenase Crosslinked with 4,4,4- Trifluorobutanol Bound
    Other atoms: Cu (9);
  5. 8ss2 (F: 12) - Structure of Ampa Receptor GLUA2 Complex with Auxiliary Subunits Tarp Gamma-5 and Cornichon-2 Bound to Competitive Antagonist Zk and Channel Blocker Spermidine (Closed State)
  6. 8ss3 (F: 12) - Structure of Lbd-Tmd of Ampa Receptor GLUA2 in Complex with Auxiliary Subunits Tarp Gamma-5 and Cornichon-2 Bound to Competitive Antagonist Zk and Channel Blocker Spermidine (Closed State)
  7. 8ss6 (F: 12) - Structure of Ampa Receptor GLUA2 Complex with Auxiliary Subunits Tarp Gamma-5 and Cornichon-2 Bound to Competitive Antagonist Zk, Channel Blocker Spermidine and Antiepileptic Drug Perampanel (Closed State)
    Other atoms: Na (1);
  8. 8ss7 (F: 12) - Structure of Ampa Receptor GLUA2 Complex with Auxiliary Subunits Tarp Gamma-5 and Cornichon-2 Bound to Competitive Antagonist Zk, Channel Blocker Spermidine and Antiepileptic Drug Perampanel (Closed State)
    Other atoms: Na (1);
  9. 8ss8 (F: 12) - Structure of Ampa Receptor GLUA2 Complex with Auxiliary Subunit Tarp Gamma-5 Bound to Competitive Antagonist Zk and Antiepileptic Drug Perampanel (Closed State)
    Other atoms: Na (2);
  10. 8ss9 (F: 12) - Structure of Lbd-Tmd of Ampa Receptor GLUA2 in Complex with Auxiliary Subunit Tarp Gamma-5 Bound to Competitive Antagonist Zk and Antiepileptic Drug Perampanel (Closed State)
    Other atoms: Na (2);
  11. 8ssn (F: 4) - Abl Kinase in Complex with Ski and Asciminib
    Other atoms: Cl (3);
  12. 8stg (F: 2) - Discovery and Clinical Validation of Rly-4008, the First Highly Selective FGFR2 Inhibitor with Activity Across FGFR2 Alterations and Resistance Mutations
  13. 8str (F: 2) - Crystal Structure of Hiv-1 Reverse Transcriptase (Y181C) Varient in Complex with 5-(2-(2-(2,4-Dioxo-3,4-Dihydropyrimidin-1(2H)-Yl) Ethoxy)-4-Fluorophenoxy)-7-Fluoro-2-Naphthonitrile (JLJ636), A Non- Nucleoside Inhibitor
  14. 8sts (F: 4) - Crystal Structure of Hiv-1 Reverse Transcriptase (Y181C, V106A) Varient in Complex with 5-(2-(2-(2,4-Dioxo-3,4-Dihydropyrimidin- 1(2H)-Yl)Ethoxy)-4-Fluorophenoxy)-7-Fluoro-2-Naphthonitrile (JLJ636), A Non-Nucleoside Inhibitor
    Other atoms: Mg (2);
  15. 8stu (F: 2) - Crystal Structure of Hiv-1 Reverse Transcriptase (Y181C, V106A) Variant in Complex with 8-(2-(2-(2,4-Dioxo-3,4-Dihydropyrimidin- 1(2H)-Yl)Ethoxy)-4-Fluorophenoxy)-6-Fluoroindolizine-2-Carbonitrile (JLJ578), A Non-Nucleoside Inhibitor
    Other atoms: Mg (1);
  16. 8sun (F: 3) - TMEM16F 1PBC
    Other atoms: Ca (3);
  17. 8sv3 (F: 10) - 7-Deazapurines and 5-Halogenpyrimidine Dna Duplex
    Other atoms: Cl (5); Mg (1); Na (2);
  18. 8sv4 (F: 8) - 7-Deazapurines and 5-Halogenpyrimidine Dna Duplex
    Other atoms: Cl (4);
  19. 8sv9 (F: 6) - Crystal Structure of ULK1 Kinase Domain with Inhibitor Mr-2088
  20. 8svl (F: 3) - Plasmodium Falciparum M1 Aminopeptidase Bound to MMV1557817
    Other atoms: Mg (5); Zn (1);
  21. 8svm (F: 36) - Plasmodium Falciparum M17 Aminopeptidase Bound to MMV1557817
    Other atoms: Zn (24);
  22. 8svy (F: 1) - Mbp-MCL1 in Complex with Ligand 10
    Other atoms: Cl (1);
  23. 8svz (F: 6) - Structure of the Francisella Response Regulator Kdpe Receiver Domain
    Other atoms: Mg (2);
  24. 8szf (F: 6) - Cryo-Em Structure of Cinacalcet-Bound Active-State Human Calcium- Sensing Receptor Casr in Lipid Nanodiscs
    Other atoms: Ca (4);
  25. 8szg (F: 6) - Cryo-Em Structure of Cinacalcet-Bound Human Calcium-Sensing Receptor Casr-Gq Complex in Lipid Nanodiscs
    Other atoms: Ca (3);
  26. 8szh (F: 6) - Cryo-Em Structure of Cinacalcet-Bound Human Calcium-Sensing Receptor Casr-Gi Complex in Lipid Nanodiscs
    Other atoms: Ca (4);
  27. 8szm (F: 27) - Crystal Structure of E. Coli Clpp Protease in Complex with Phosphine Oxide Compound ACP6-12
  28. 8szn (F: 99) - Crystal Structure of Neisseria Meningitidis Clpp Protease in Complex with Phosphine Oxide Compound ACP6-12
  29. 8szv (F: 6) - Crystal Structure of Pregnane X Receptor Ligand Binding Domain Complexed with T0901317 Analog Sjpyt-318
  30. 8t0l (F: 3) - E. Coli SW2/SNF2 Atpase Rapa Bound to Both Adp-ALF3 and Reconstituted E. Coli Rna Polymerase Post-Termination Complex on Negatively- Supercoiled Dna
    Other atoms: Mg (1); Zn (2); Al (1);
  31. 8t0t (F: 1) - Structure of Compound 4 Bound to Human ALDH1A1
    Other atoms: Yb (1); Cl (1);
  32. 8t1f (F: 12) - Cryo-Em Structure of Full-Length Human TRPV4 in Complex with Antagonist Hc-067047
  33. 8t1u (F: 1) - Crystal Structure of the DRM2-Cta Dna Complex
  34. 8t1v (F: 2) - Crystal Structure of Orphan G Protein-Coupled Receptor 6 with Bound Inverse Agonist 3H
    Other atoms: Na (1);
  35. 8t1w (F: 2) - Crystal Structure of Orphan G Protein-Coupled Receptor 6 with Bound CVN424
  36. 8t2h (F: 2) - DYRK1A Complex with DYR530
  37. 8t3o (F: 1) - Cryo-Em Structure of the Tug-891 Bound FFA4-Gq Complex
  38. 8t4o (F: 1) - Human Mitochondrial Serine Hydroxymethyltransferase (SHMT2) in Complex with Plp, Glycine and AGF347 Inhibitor with No Glutamate
  39. 8t4p (F: 1) - Human Mitochondrial Serine Hydroxymethyltransferase (SHMT2) in Complex with Plp, Glycine and Di-Glutamate AGF347 Inhibitor
  40. 8t4v (F: 2) - Crystal Structure of Compound 1 Bound to K-Ras(G12D)
    Other atoms: Mg (2);
Page generated: Wed Jul 16 08:11:38 2025

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