Atomistry » Fluorine » PDB 9cdm-9f2h » 9ct3
Atomistry »
  Fluorine »
    PDB 9cdm-9f2h »
      9ct3 »

Fluorine in PDB 9ct3: Hssting with Sr-717 and C53

Other elements in 9ct3:

The structure of Hssting with Sr-717 and C53 also contains other interesting chemical elements:

Chlorine (Cl) 2 atoms

Fluorine Binding Sites:

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 16;

Binding sites:

The binding sites of Fluorine atom in the Hssting with Sr-717 and C53 (pdb code 9ct3). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total 16 binding sites of Fluorine where determined in the Hssting with Sr-717 and C53, PDB code: 9ct3:
Jump to Fluorine binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Fluorine binding site 1 out of 16 in 9ct3

Go back to Fluorine Binding Sites List in 9ct3
Fluorine binding site 1 out of 16 in the Hssting with Sr-717 and C53


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Hssting with Sr-717 and C53 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F401

b:39.3
occ:1.00
F14 A:V67401 0.0 39.3 1.0
C13 A:V67401 1.4 32.4 1.0
C12 A:V67401 2.4 27.2 1.0
C15 A:V67401 2.4 31.2 1.0
F16 A:V67401 2.8 37.2 1.0
CB A:SER162 3.2 27.1 1.0
C A:SER162 3.5 24.9 1.0
N A:TYR163 3.6 24.8 1.0
C11 A:V67401 3.6 26.9 1.0
F14 B:V67401 3.6 36.3 1.0
C17 A:V67401 3.6 28.8 1.0
C13 B:V67401 3.7 33.1 1.0
O A:SER162 3.8 30.4 1.0
F16 B:V67401 3.8 40.0 1.0
C15 B:V67401 3.8 33.2 1.0
CA A:SER162 3.9 24.2 1.0
C18 A:V67401 4.1 30.8 1.0
CA A:TYR163 4.1 20.3 1.0
O A:LEU159 4.2 28.4 1.0
CG A:PRO264 4.3 27.5 1.0
OG A:SER162 4.3 32.8 1.0
C12 B:V67401 4.5 30.4 1.0
C17 B:V67401 4.6 30.6 1.0
CD2 A:LEU159 4.6 28.4 1.0
CB A:TYR163 4.7 23.1 1.0
O9 A:V67401 4.8 31.2 1.0
N10 A:V67401 4.9 29.5 1.0
N A:SER162 5.0 28.7 1.0

Fluorine binding site 2 out of 16 in 9ct3

Go back to Fluorine Binding Sites List in 9ct3
Fluorine binding site 2 out of 16 in the Hssting with Sr-717 and C53


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 2 of Hssting with Sr-717 and C53 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F401

b:37.2
occ:1.00
F16 A:V67401 0.0 37.2 1.0
C15 A:V67401 1.4 31.2 1.0
C17 A:V67401 2.4 28.8 1.0
C13 A:V67401 2.4 32.4 1.0
F14 A:V67401 2.8 39.3 1.0
CB A:SER162 3.1 27.1 1.0
OG A:SER162 3.6 32.8 1.0
C18 A:V67401 3.6 30.8 1.0
C12 A:V67401 3.6 27.2 1.0
F14 B:V67401 3.8 36.3 1.0
OG1 B:THR267 3.8 37.0 1.0
CG B:PRO264 4.1 33.5 1.0
CA B:PRO264 4.1 35.6 1.0
C11 A:V67401 4.1 26.9 1.0
CA A:SER162 4.1 24.2 1.0
O A:SER162 4.3 30.4 1.0
N B:PRO264 4.3 38.5 1.0
CD2 B:LEU159 4.3 29.1 1.0
C13 B:V67401 4.3 33.1 1.0
C A:SER162 4.3 24.9 1.0
OG1 B:THR263 4.4 49.8 1.0
CB B:PRO264 4.5 37.5 1.0
CD B:PRO264 4.5 33.8 1.0
C12 B:V67401 4.5 30.4 1.0
CB B:THR267 4.5 41.1 1.0
C B:THR263 4.6 45.1 1.0
O B:THR263 4.6 50.1 1.0
C19 A:V67401 4.9 42.2 1.0

Fluorine binding site 3 out of 16 in 9ct3

Go back to Fluorine Binding Sites List in 9ct3
Fluorine binding site 3 out of 16 in the Hssting with Sr-717 and C53


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 3 of Hssting with Sr-717 and C53 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F402

b:59.9
occ:1.00
F10 A:9IM402 0.0 59.9 1.0
C09 A:9IM402 1.4 49.5 1.0
C11 A:9IM402 2.2 42.9 1.0
C08 A:9IM402 2.5 48.7 1.0
CD2 B:HIS50 3.0 43.2 1.0
C07 A:9IM402 3.1 50.9 1.0
C17 A:9IM402 3.2 54.3 1.0
N21 A:9IM402 3.4 50.2 1.0
C12 A:9IM402 3.5 45.7 1.0
CG B:HIS50 3.7 43.7 1.0
C14 A:9IM402 3.7 49.7 1.0
C24 A:9IM402 3.7 44.5 1.0
C16 A:9IM402 3.8 55.4 1.0
N06 A:9IM402 3.8 53.7 1.0
CA B:HIS50 3.8 36.4 1.0
CB B:HIS50 3.9 38.5 1.0
F25 A:9IM402 3.9 52.2 1.0
C23 A:9IM402 3.9 45.2 1.0
C13 A:9IM402 4.1 49.2 1.0
OG B:SER53 4.1 46.6 1.0
NE2 B:HIS50 4.1 43.3 1.0
C26 A:9IM402 4.1 49.5 1.0
C18 A:9IM402 4.2 52.2 1.0
C19 A:9IM402 4.3 50.5 1.0
C22 A:9IM402 4.3 49.5 1.0
C30 A:9IM402 4.5 53.3 1.0
N B:HIS50 4.5 39.6 1.0
C27 A:9IM402 4.6 54.0 1.0
C29 A:9IM402 4.8 56.7 1.0
CB B:SER53 4.8 49.3 1.0
ND1 B:HIS50 4.9 49.5 1.0
C B:HIS50 5.0 44.5 1.0

Fluorine binding site 4 out of 16 in 9ct3

Go back to Fluorine Binding Sites List in 9ct3
Fluorine binding site 4 out of 16 in the Hssting with Sr-717 and C53


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 4 of Hssting with Sr-717 and C53 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F402

b:52.2
occ:1.00
F25 A:9IM402 0.0 52.2 1.0
C24 A:9IM402 1.4 44.5 1.0
C23 A:9IM402 2.4 45.2 1.0
C26 A:9IM402 2.4 49.5 1.0
C22 A:9IM402 2.8 49.5 1.0
C11 A:9IM402 3.0 42.9 1.0
N21 A:9IM402 3.0 50.2 1.0
CD A:PRO115 3.0 67.3 1.0
CA A:GLY114 3.2 55.3 1.0
C12 A:9IM402 3.5 45.7 1.0
C30 A:9IM402 3.6 53.3 1.0
C27 A:9IM402 3.6 54.0 1.0
C19 A:9IM402 3.8 50.5 1.0
C09 A:9IM402 3.9 49.5 1.0
F10 A:9IM402 3.9 59.9 1.0
CG A:PRO115 4.0 68.7 1.0
N A:PRO115 4.0 68.9 1.0
C29 A:9IM402 4.1 56.7 1.0
N A:GLY114 4.2 51.0 1.0
C A:GLY114 4.2 66.8 1.0
O20 A:9IM402 4.2 47.4 1.0
O A:VAL113 4.3 61.5 1.0
OH A:TYR106 4.4 56.9 1.0
C17 A:9IM402 4.6 54.3 1.0
C A:VAL113 4.6 56.8 1.0
C13 A:9IM402 4.7 49.2 1.0
F28 A:9IM402 4.8 51.6 1.0
C18 A:9IM402 4.8 52.2 1.0
F31 A:9IM402 4.9 57.3 1.0
C08 A:9IM402 5.0 48.7 1.0

Fluorine binding site 5 out of 16 in 9ct3

Go back to Fluorine Binding Sites List in 9ct3
Fluorine binding site 5 out of 16 in the Hssting with Sr-717 and C53


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 5 of Hssting with Sr-717 and C53 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F402

b:51.6
occ:1.00
F28 A:9IM402 0.0 51.6 1.0
C27 A:9IM402 1.4 54.0 1.0
C26 A:9IM402 2.4 49.5 1.0
C29 A:9IM402 2.4 56.7 1.0
CB B:HIS50 3.4 38.5 1.0
ND1 B:HIS50 3.4 49.5 1.0
CG B:HIS50 3.5 43.7 1.0
CB A:LEU123 3.6 44.3 1.0
C24 A:9IM402 3.6 44.5 1.0
C30 A:9IM402 3.6 53.3 1.0
O A:LEU123 3.9 49.9 1.0
C A:LEU123 3.9 46.7 1.0
O B:TYR46 4.0 49.1 1.0
C23 A:9IM402 4.1 45.2 1.0
CD1 B:LEU47 4.2 51.0 1.0
CA B:LEU47 4.3 45.4 1.0
N A:LEU124 4.3 45.6 1.0
CE1 B:HIS50 4.3 47.9 1.0
CD1 A:LEU123 4.4 59.4 1.0
CA A:LEU123 4.4 44.8 1.0
C B:TYR46 4.4 43.9 1.0
CD2 B:HIS50 4.5 43.2 1.0
F31 A:9IM402 4.5 57.3 1.0
N B:LEU47 4.6 46.4 1.0
CG A:LEU123 4.6 54.3 1.0
CA A:LEU124 4.6 45.6 1.0
OG A:SER127 4.7 55.0 1.0
CB A:SER127 4.7 47.5 1.0
F25 A:9IM402 4.8 52.2 1.0
CA B:HIS50 4.8 36.4 1.0
NE2 B:HIS50 4.8 43.3 1.0
CB B:TYR46 5.0 55.2 1.0

Fluorine binding site 6 out of 16 in 9ct3

Go back to Fluorine Binding Sites List in 9ct3
Fluorine binding site 6 out of 16 in the Hssting with Sr-717 and C53


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 6 of Hssting with Sr-717 and C53 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F402

b:57.3
occ:1.00
F31 A:9IM402 0.0 57.3 1.0
C30 A:9IM402 1.4 53.3 1.0
C29 A:9IM402 2.2 56.7 1.0
C23 A:9IM402 2.6 45.2 1.0
C22 A:9IM402 3.2 49.5 1.0
CB A:LEU124 3.3 44.7 1.0
CD1 A:LEU124 3.4 48.0 1.0
C27 A:9IM402 3.5 54.0 1.0
CD2 A:LEU124 3.5 43.5 1.0
CB A:SER53 3.5 43.6 1.0
CG A:LEU124 3.6 47.9 1.0
CG A:MET120 3.6 60.2 1.0
SD A:MET120 3.6 63.1 1.0
C24 A:9IM402 3.7 44.5 1.0
N21 A:9IM402 4.0 50.2 1.0
NE2 B:HIS50 4.1 43.3 1.0
C26 A:9IM402 4.1 49.5 1.0
CE1 B:HIS50 4.2 47.9 1.0
CA A:LEU124 4.2 45.6 1.0
OG A:SER53 4.3 46.3 1.0
O A:MET120 4.3 53.1 1.0
CA A:SER53 4.4 36.8 1.0
F28 A:9IM402 4.5 51.6 1.0
CD2 B:HIS50 4.6 43.2 1.0
N A:LEU124 4.6 45.6 1.0
ND1 B:HIS50 4.7 49.5 1.0
O A:SER53 4.9 41.3 1.0
CG B:HIS50 4.9 43.7 1.0
F25 A:9IM402 4.9 52.2 1.0
CE A:MET120 5.0 54.3 1.0
C A:SER53 5.0 37.8 1.0

Fluorine binding site 7 out of 16 in 9ct3

Go back to Fluorine Binding Sites List in 9ct3
Fluorine binding site 7 out of 16 in the Hssting with Sr-717 and C53


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 7 of Hssting with Sr-717 and C53 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:F401

b:36.3
occ:1.00
F14 B:V67401 0.0 36.3 1.0
C13 B:V67401 1.4 33.1 1.0
C12 B:V67401 2.4 30.4 1.0
C15 B:V67401 2.4 33.2 1.0
F16 B:V67401 2.7 40.0 1.0
CB B:SER162 3.4 26.1 1.0
C B:SER162 3.6 28.3 1.0
N B:TYR163 3.6 25.8 1.0
F14 A:V67401 3.6 39.3 1.0
C17 B:V67401 3.6 30.6 1.0
C11 B:V67401 3.6 30.4 1.0
C13 A:V67401 3.7 32.4 1.0
F16 A:V67401 3.8 37.2 1.0
C15 A:V67401 3.8 31.2 1.0
O B:SER162 3.8 31.5 1.0
CA B:TYR163 4.0 24.6 1.0
C18 B:V67401 4.1 33.0 1.0
CA B:SER162 4.1 26.1 1.0
O B:LEU159 4.1 29.2 1.0
C12 A:V67401 4.4 27.2 1.0
CG B:PRO264 4.5 33.5 1.0
C17 A:V67401 4.5 28.8 1.0
CB B:TYR163 4.6 25.9 1.0
OG B:SER162 4.6 32.2 1.0
CD2 A:LEU159 4.7 28.4 1.0
O9 B:V67401 4.8 35.9 1.0
N10 B:V67401 4.9 28.8 1.0
CD2 B:LEU159 4.9 29.1 1.0

Fluorine binding site 8 out of 16 in 9ct3

Go back to Fluorine Binding Sites List in 9ct3
Fluorine binding site 8 out of 16 in the Hssting with Sr-717 and C53


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 8 of Hssting with Sr-717 and C53 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:F401

b:40.0
occ:1.00
F16 B:V67401 0.0 40.0 1.0
C15 B:V67401 1.4 33.2 1.0
C17 B:V67401 2.4 30.6 1.0
C13 B:V67401 2.4 33.1 1.0
F14 B:V67401 2.7 36.3 1.0
CB B:SER162 3.3 26.1 1.0
CG2 A:THR267 3.5 34.4 1.0
C18 B:V67401 3.6 33.0 1.0
C12 B:V67401 3.6 30.4 1.0
F14 A:V67401 3.8 39.3 1.0
CA A:PRO264 3.8 32.4 1.0
OG1 A:THR267 3.9 42.3 1.0
OG B:SER162 3.9 32.2 1.0
CG A:PRO264 4.0 27.5 1.0
N A:PRO264 4.0 33.2 1.0
C11 B:V67401 4.1 30.4 1.0
CB A:PRO264 4.2 33.0 1.0
O B:SER162 4.2 31.5 1.0
CD2 A:LEU159 4.2 28.4 1.0
CB A:THR267 4.2 38.1 1.0
CA B:SER162 4.3 26.1 1.0
OG1 A:THR263 4.3 44.8 1.0
C13 A:V67401 4.3 32.4 1.0
C B:SER162 4.4 28.3 1.0
CD A:PRO264 4.4 29.6 1.0
C A:THR263 4.4 38.7 1.0
C12 A:V67401 4.5 27.2 1.0
O A:THR263 4.5 45.4 1.0
C19 B:V67401 4.9 39.5 1.0
CB A:THR263 4.9 40.7 1.0

Fluorine binding site 9 out of 16 in 9ct3

Go back to Fluorine Binding Sites List in 9ct3
Fluorine binding site 9 out of 16 in the Hssting with Sr-717 and C53


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 9 of Hssting with Sr-717 and C53 within 5.0Å range:
probe atom residue distance (Å) B Occ
C:F401

b:38.5
occ:1.00
F14 C:V67401 0.0 38.5 1.0
C13 C:V67401 1.4 32.4 1.0
C12 C:V67401 2.4 27.6 1.0
C15 C:V67401 2.4 31.8 1.0
F16 C:V67401 2.8 38.1 1.0
CB C:SER162 3.2 26.7 1.0
C C:SER162 3.5 23.2 1.0
N C:TYR163 3.6 23.0 1.0
F14 D:V67401 3.6 35.7 1.0
C11 C:V67401 3.6 27.5 1.0
C17 C:V67401 3.6 29.0 1.0
C13 D:V67401 3.7 33.8 1.0
O C:SER162 3.8 31.7 1.0
F16 D:V67401 3.8 40.3 1.0
C15 D:V67401 3.8 34.4 1.0
CA C:SER162 4.0 21.6 1.0
C18 C:V67401 4.1 31.6 1.0
CA C:TYR163 4.1 20.7 1.0
O C:LEU159 4.1 28.2 1.0
CG C:PRO264 4.2 26.7 1.0
OG C:SER162 4.3 30.6 1.0
C12 D:V67401 4.5 31.3 1.0
C17 D:V67401 4.6 31.3 1.0
CD2 C:LEU159 4.7 29.7 1.0
CB C:TYR163 4.7 23.0 1.0
O9 C:V67401 4.8 31.5 1.0
N10 C:V67401 4.9 29.0 1.0
N C:SER162 5.0 27.9 1.0
CD2 D:LEU159 5.0 28.3 1.0

Fluorine binding site 10 out of 16 in 9ct3

Go back to Fluorine Binding Sites List in 9ct3
Fluorine binding site 10 out of 16 in the Hssting with Sr-717 and C53


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 10 of Hssting with Sr-717 and C53 within 5.0Å range:
probe atom residue distance (Å) B Occ
C:F401

b:38.1
occ:1.00
F16 C:V67401 0.0 38.1 1.0
C15 C:V67401 1.4 31.8 1.0
C17 C:V67401 2.4 29.0 1.0
C13 C:V67401 2.4 32.4 1.0
F14 C:V67401 2.8 38.5 1.0
CB C:SER162 3.1 26.7 1.0
C18 C:V67401 3.6 31.6 1.0
C12 C:V67401 3.6 27.6 1.0
OG C:SER162 3.7 30.6 1.0
F14 D:V67401 3.8 35.7 1.0
OG1 D:THR267 3.9 38.8 1.0
CG D:PRO264 4.1 33.0 1.0
CA D:PRO264 4.1 34.2 1.0
C11 C:V67401 4.1 27.5 1.0
CA C:SER162 4.2 21.6 1.0
O C:SER162 4.3 31.7 1.0
CD2 D:LEU159 4.3 28.3 1.0
N D:PRO264 4.3 37.1 1.0
C C:SER162 4.4 23.2 1.0
CB D:PRO264 4.4 35.3 1.0
C13 D:V67401 4.4 33.8 1.0
CB D:THR267 4.5 38.8 1.0
OG1 D:THR263 4.5 46.9 1.0
CD D:PRO264 4.5 34.7 1.0
C12 D:V67401 4.6 31.3 1.0
C D:THR263 4.7 43.8 1.0
O D:THR263 4.8 48.9 1.0
CG2 D:THR267 4.9 40.5 1.0
C19 C:V67401 4.9 43.8 1.0

Reference:

A.Gharpure, A.Sulpizio, J.R.Loeffler, M.L.Fernandez-Quintero, A.S.Tran, L.L.Lairson, A.B.Ward. Distinct Oligomeric Assemblies of Sting Induced By Non-Nucleotide Agonists. Nat Commun V. 16 3440 2025.
ISSN: ESSN 2041-1723
PubMed: 40216780
DOI: 10.1038/S41467-025-58641-5
Page generated: Wed Jul 16 10:44:42 2025

Last articles

Fe in 6XN6
Fe in 6XMC
Fe in 6XMA
Fe in 6XKV
Fe in 6XKU
Fe in 6XKT
Fe in 6XI0
Fe in 6XK8
Fe in 6XIG
Fe in 6XK7
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy