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Fluorine in PDB 1e1r: Bovine Mitochondrial F1-Atpase Inhibited By MG2+Adp and Aluminium Fluoride

Enzymatic activity of Bovine Mitochondrial F1-Atpase Inhibited By MG2+Adp and Aluminium Fluoride

All present enzymatic activity of Bovine Mitochondrial F1-Atpase Inhibited By MG2+Adp and Aluminium Fluoride:
3.6.1.34;

Protein crystallography data

The structure of Bovine Mitochondrial F1-Atpase Inhibited By MG2+Adp and Aluminium Fluoride, PDB code: 1e1r was solved by K.Braig, R.I.Menz, M.G.Montgomery, A.G.W.Leslie, J.E.Walker, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20 / 2.5
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 278.600, 106.700, 137.900, 90.00, 90.00, 90.00
R / Rfree (%) 21.8 / 28.2

Other elements in 1e1r:

The structure of Bovine Mitochondrial F1-Atpase Inhibited By MG2+Adp and Aluminium Fluoride also contains other interesting chemical elements:

Magnesium (Mg) 5 atoms
Aluminium (Al) 1 atom

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Bovine Mitochondrial F1-Atpase Inhibited By MG2+Adp and Aluminium Fluoride (pdb code 1e1r). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total 3 binding sites of Fluorine where determined in the Bovine Mitochondrial F1-Atpase Inhibited By MG2+Adp and Aluminium Fluoride, PDB code: 1e1r:
Jump to Fluorine binding site number: 1; 2; 3;

Fluorine binding site 1 out of 3 in 1e1r

Go back to Fluorine Binding Sites List in 1e1r
Fluorine binding site 1 out of 3 in the Bovine Mitochondrial F1-Atpase Inhibited By MG2+Adp and Aluminium Fluoride


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Bovine Mitochondrial F1-Atpase Inhibited By MG2+Adp and Aluminium Fluoride within 5.0Å range:
probe atom residue distance (Å) B Occ
D:F602

b:41.8
occ:1.00
F1 D:AF3602 0.0 41.8 1.0
AL D:AF3602 1.7 43.5 1.0
CA C:SER344 2.8 28.0 1.0
NH2 C:ARG373 2.8 28.7 1.0
F3 D:AF3602 2.9 41.4 1.0
F2 D:AF3602 3.0 45.8 1.0
O3B D:ADP600 3.3 34.2 1.0
O C:ILE343 3.3 31.1 1.0
CB C:SER344 3.3 24.0 1.0
N D:GLY159 3.4 26.8 1.0
NH1 C:ARG373 3.5 26.2 1.0
NH2 D:ARG189 3.5 29.5 1.0
CZ C:ARG373 3.5 32.9 1.0
N C:SER344 3.6 28.9 1.0
CA D:ALA158 3.6 30.9 1.0
C C:SER344 3.7 29.2 1.0
CB D:ALA158 3.7 25.3 1.0
C C:ILE343 3.8 30.2 1.0
O C:SER344 3.8 28.2 1.0
O D:HOH2052 3.9 35.5 1.0
C D:ALA158 3.9 28.0 1.0
CA D:GLY159 4.3 28.1 1.0
NH1 D:ARG189 4.3 30.1 1.0
CZ D:ARG189 4.4 28.5 1.0
CG2 C:ILE343 4.5 27.9 1.0
N C:ILE345 4.6 27.1 1.0
OG C:SER344 4.6 25.9 1.0
NE C:ARG373 4.7 39.9 1.0
PB D:ADP600 4.7 31.2 1.0
CE1 D:TYR311 4.9 28.9 1.0
N D:ALA158 5.0 33.2 1.0
O D:ALA158 5.0 31.0 1.0

Fluorine binding site 2 out of 3 in 1e1r

Go back to Fluorine Binding Sites List in 1e1r
Fluorine binding site 2 out of 3 in the Bovine Mitochondrial F1-Atpase Inhibited By MG2+Adp and Aluminium Fluoride


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 2 of Bovine Mitochondrial F1-Atpase Inhibited By MG2+Adp and Aluminium Fluoride within 5.0Å range:
probe atom residue distance (Å) B Occ
D:F602

b:45.8
occ:1.00
F2 D:AF3602 0.0 45.8 1.0
AL D:AF3602 1.7 43.5 1.0
NZ D:LYS162 2.7 21.5 1.0
F3 D:AF3602 2.9 41.4 1.0
F1 D:AF3602 3.0 41.8 1.0
O D:HOH2050 3.0 33.7 1.0
O3B D:ADP600 3.1 34.2 1.0
CD1 D:TYR311 3.1 28.3 1.0
CE1 D:TYR311 3.5 28.9 1.0
CE D:LYS162 3.5 25.6 1.0
O D:HOH2052 3.6 35.5 1.0
O D:GLY157 3.8 38.4 1.0
CA D:ALA158 3.9 30.9 1.0
PB D:ADP600 4.0 31.2 1.0
N D:GLY159 4.1 26.8 1.0
CB C:SER344 4.2 24.0 1.0
CG D:TYR311 4.2 26.9 1.0
O2B D:ADP600 4.3 32.1 1.0
C D:GLY157 4.3 34.6 1.0
O1B D:ADP600 4.4 35.0 1.0
N D:ALA158 4.4 33.2 1.0
C D:ALA158 4.5 28.0 1.0
MG D:MG601 4.6 33.0 1.0
CB D:ALA158 4.6 25.3 1.0
O D:HOH2072 4.6 35.0 1.0
CB D:TYR311 4.6 27.6 1.0
O D:GLY156 4.7 27.9 1.0
CA C:SER344 4.8 28.0 1.0
CZ D:TYR311 4.8 28.0 1.0
CD D:LYS162 5.0 21.9 1.0

Fluorine binding site 3 out of 3 in 1e1r

Go back to Fluorine Binding Sites List in 1e1r
Fluorine binding site 3 out of 3 in the Bovine Mitochondrial F1-Atpase Inhibited By MG2+Adp and Aluminium Fluoride


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 3 of Bovine Mitochondrial F1-Atpase Inhibited By MG2+Adp and Aluminium Fluoride within 5.0Å range:
probe atom residue distance (Å) B Occ
D:F602

b:41.4
occ:1.00
F3 D:AF3602 0.0 41.4 1.0
AL D:AF3602 1.7 43.5 1.0
MG D:MG601 2.5 33.0 1.0
O3B D:ADP600 2.5 34.2 1.0
F1 D:AF3602 2.9 41.8 1.0
F2 D:AF3602 2.9 45.8 1.0
O2B D:ADP600 3.0 32.1 1.0
NH1 D:ARG189 3.0 30.1 1.0
NH1 C:ARG373 3.0 26.2 1.0
O D:HOH2052 3.1 35.5 1.0
PB D:ADP600 3.2 31.2 1.0
O D:HOH2143 3.3 27.7 1.0
O D:HOH2051 3.4 37.5 1.0
O D:HOH2050 3.6 33.7 1.0
O D:HOH2072 3.7 35.0 1.0
OE1 D:GLU188 3.8 35.4 1.0
NH2 D:ARG189 3.9 29.5 1.0
CZ D:ARG189 3.9 28.5 1.0
CZ C:ARG373 4.0 32.9 1.0
O3A D:ADP600 4.2 32.4 1.0
NH2 C:ARG373 4.2 28.7 1.0
O1B D:ADP600 4.5 35.0 1.0
NZ D:LYS162 4.5 21.5 1.0
O2A D:ADP600 4.7 29.1 1.0
OG1 D:THR163 4.7 35.0 1.0
O C:SER344 4.7 28.2 1.0
N D:GLY159 4.7 26.8 1.0
CD D:GLU188 4.8 34.8 1.0
CA C:SER344 5.0 28.0 1.0

Reference:

K.Braig, R.I.Menz, M.G.Montgomery, A.G.W.Leslie, J.E.Walker. Structure of Bovine Mitochondrial F1-Atpase Inhibited By MG2+Adp and Aluminium Fluoride Structure V. 8 567 2000.
ISSN: ISSN 0969-2126
PubMed: 10873854
DOI: 10.1016/S0969-2126(00)00145-3
Page generated: Wed Jul 31 11:07:41 2024

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