Fluorine in PDB 1e7b: Crystal Structure of Human Serum Albumin Complexed with the General Anesthetic Halothane
Protein crystallography data
The structure of Crystal Structure of Human Serum Albumin Complexed with the General Anesthetic Halothane, PDB code: 1e7b
was solved by
A.A.Bhattacharya,
S.Curry,
N.P.Franks,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
17.00 /
2.38
|
Space group
|
P 1
|
Cell size a, b, c (Å), α, β, γ (°)
|
54.580,
54.960,
120.000,
81.39,
90.79,
65.55
|
R / Rfree (%)
|
27 /
30.3
|
Other elements in 1e7b:
The structure of Crystal Structure of Human Serum Albumin Complexed with the General Anesthetic Halothane also contains other interesting chemical elements:
Fluorine Binding Sites:
Pages:
>>> Page 1 <<<
Page 2, Binding sites: 11 -
18;
Binding sites:
The binding sites of Fluorine atom in the Crystal Structure of Human Serum Albumin Complexed with the General Anesthetic Halothane
(pdb code 1e7b). This binding sites where shown within
5.0 Angstroms radius around Fluorine atom.
In total 18 binding sites of Fluorine where determined in the
Crystal Structure of Human Serum Albumin Complexed with the General Anesthetic Halothane, PDB code: 1e7b:
Jump to Fluorine binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Fluorine binding site 1 out
of 18 in 1e7b
Go back to
Fluorine Binding Sites List in 1e7b
Fluorine binding site 1 out
of 18 in the Crystal Structure of Human Serum Albumin Complexed with the General Anesthetic Halothane
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 1 of Crystal Structure of Human Serum Albumin Complexed with the General Anesthetic Halothane within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F4001
b:74.6
occ:0.54
|
F1
|
A:HLT4001
|
0.0
|
74.6
|
0.5
|
C2
|
A:HLT4001
|
1.3
|
74.7
|
0.5
|
F3
|
A:HLT4001
|
2.2
|
73.9
|
0.5
|
F2
|
A:HLT4001
|
2.2
|
73.3
|
0.5
|
C1
|
A:HLT4001
|
2.3
|
74.6
|
0.5
|
CL
|
A:HLT4001
|
2.7
|
73.4
|
0.5
|
BR
|
A:HLT4001
|
3.2
|
81.0
|
0.5
|
O
|
A:ASP324
|
3.3
|
59.8
|
1.0
|
CG
|
A:ASP324
|
3.7
|
65.8
|
1.0
|
OD1
|
A:ASP324
|
3.7
|
65.2
|
1.0
|
CB
|
A:ASP324
|
3.8
|
63.8
|
1.0
|
C
|
A:ASP324
|
3.9
|
60.4
|
1.0
|
CA
|
A:ASP324
|
4.0
|
62.7
|
1.0
|
OD2
|
A:ASP324
|
4.1
|
68.4
|
1.0
|
CG
|
A:ARG209
|
4.7
|
69.8
|
1.0
|
N
|
A:GLY328
|
4.8
|
45.7
|
1.0
|
CA
|
A:GLY328
|
4.8
|
46.4
|
1.0
|
NE
|
A:ARG209
|
4.9
|
83.5
|
1.0
|
|
Fluorine binding site 2 out
of 18 in 1e7b
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Fluorine Binding Sites List in 1e7b
Fluorine binding site 2 out
of 18 in the Crystal Structure of Human Serum Albumin Complexed with the General Anesthetic Halothane
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 2 of Crystal Structure of Human Serum Albumin Complexed with the General Anesthetic Halothane within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F4001
b:73.3
occ:0.54
|
F2
|
A:HLT4001
|
0.0
|
73.3
|
0.5
|
C2
|
A:HLT4001
|
1.3
|
74.7
|
0.5
|
F1
|
A:HLT4001
|
2.2
|
74.6
|
0.5
|
F3
|
A:HLT4001
|
2.2
|
73.9
|
0.5
|
C1
|
A:HLT4001
|
2.3
|
74.6
|
0.5
|
CL
|
A:HLT4001
|
3.1
|
73.4
|
0.5
|
CG
|
A:ARG209
|
3.2
|
69.8
|
1.0
|
O
|
A:ARG209
|
3.3
|
49.3
|
1.0
|
BR
|
A:HLT4001
|
3.9
|
81.0
|
0.5
|
CB
|
A:LYS212
|
4.0
|
45.6
|
1.0
|
CA
|
A:ARG209
|
4.0
|
56.0
|
1.0
|
C
|
A:ARG209
|
4.0
|
52.3
|
1.0
|
CB
|
A:ARG209
|
4.1
|
61.4
|
1.0
|
CD
|
A:ARG209
|
4.3
|
77.9
|
1.0
|
NE
|
A:ARG209
|
4.3
|
83.5
|
1.0
|
N
|
A:ALA213
|
4.3
|
42.3
|
1.0
|
CD
|
A:LYS212
|
4.3
|
54.6
|
1.0
|
CB
|
A:ALA213
|
4.7
|
42.5
|
1.0
|
OD1
|
A:ASP324
|
4.7
|
65.2
|
1.0
|
CA
|
A:ALA213
|
4.8
|
41.0
|
1.0
|
CG
|
A:ASP324
|
4.8
|
65.8
|
1.0
|
OD2
|
A:ASP324
|
4.8
|
68.4
|
1.0
|
CG
|
A:LYS212
|
4.8
|
50.0
|
1.0
|
C
|
A:LYS212
|
4.9
|
41.5
|
1.0
|
CL
|
A:HLT4002
|
4.9
|
71.3
|
0.5
|
F1
|
A:HLT4002
|
5.0
|
70.2
|
0.5
|
|
Fluorine binding site 3 out
of 18 in 1e7b
Go back to
Fluorine Binding Sites List in 1e7b
Fluorine binding site 3 out
of 18 in the Crystal Structure of Human Serum Albumin Complexed with the General Anesthetic Halothane
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 3 of Crystal Structure of Human Serum Albumin Complexed with the General Anesthetic Halothane within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F4001
b:73.9
occ:0.54
|
F3
|
A:HLT4001
|
0.0
|
73.9
|
0.5
|
C2
|
A:HLT4001
|
1.3
|
74.7
|
0.5
|
F1
|
A:HLT4001
|
2.2
|
74.6
|
0.5
|
F2
|
A:HLT4001
|
2.2
|
73.3
|
0.5
|
C1
|
A:HLT4001
|
2.3
|
74.6
|
0.5
|
BR
|
A:HLT4001
|
2.8
|
81.0
|
0.5
|
CL
|
A:HLT4001
|
3.8
|
73.4
|
0.5
|
CB
|
A:LYS212
|
3.9
|
45.6
|
1.0
|
N
|
A:ALA213
|
4.2
|
42.3
|
1.0
|
CG2
|
A:VAL216
|
4.3
|
42.0
|
1.0
|
C
|
A:LYS212
|
4.3
|
41.5
|
1.0
|
CA
|
A:ALA213
|
4.3
|
41.0
|
1.0
|
O
|
A:LYS212
|
4.6
|
40.1
|
1.0
|
O
|
A:ARG209
|
4.7
|
49.3
|
1.0
|
CD
|
A:LYS212
|
4.7
|
54.6
|
1.0
|
O
|
A:ASP324
|
4.7
|
59.8
|
1.0
|
CB
|
A:ALA213
|
4.8
|
42.5
|
1.0
|
CA
|
A:GLY328
|
4.8
|
46.4
|
1.0
|
CA
|
A:LYS212
|
4.8
|
42.3
|
1.0
|
CG
|
A:LYS212
|
4.9
|
50.0
|
1.0
|
|
Fluorine binding site 4 out
of 18 in 1e7b
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Fluorine Binding Sites List in 1e7b
Fluorine binding site 4 out
of 18 in the Crystal Structure of Human Serum Albumin Complexed with the General Anesthetic Halothane
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 4 of Crystal Structure of Human Serum Albumin Complexed with the General Anesthetic Halothane within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F4002
b:70.2
occ:0.47
|
F1
|
A:HLT4002
|
0.0
|
70.2
|
0.5
|
C2
|
A:HLT4002
|
1.3
|
71.6
|
0.5
|
F3
|
A:HLT4002
|
2.2
|
70.8
|
0.5
|
F2
|
A:HLT4002
|
2.2
|
70.4
|
0.5
|
C1
|
A:HLT4002
|
2.3
|
72.2
|
0.5
|
CL
|
A:HLT4001
|
2.7
|
73.4
|
0.5
|
CL
|
A:HLT4002
|
2.9
|
71.3
|
0.5
|
C1
|
A:HLT4001
|
3.2
|
74.6
|
0.5
|
BR
|
A:HLT4001
|
3.8
|
81.0
|
0.5
|
CB
|
A:ALA213
|
4.0
|
42.5
|
1.0
|
BR
|
A:HLT4002
|
4.0
|
78.7
|
0.5
|
O
|
A:HOH2016
|
4.4
|
90.1
|
1.0
|
NH1
|
A:ARG209
|
4.5
|
85.5
|
1.0
|
C2
|
A:HLT4001
|
4.6
|
74.7
|
0.5
|
CZ
|
A:ARG209
|
4.8
|
84.4
|
1.0
|
CB
|
A:ALA350
|
4.8
|
38.2
|
1.0
|
CD2
|
A:LEU331
|
4.8
|
43.0
|
1.0
|
CB
|
A:LEU327
|
4.9
|
41.7
|
1.0
|
F2
|
A:HLT4001
|
5.0
|
73.3
|
0.5
|
OE1
|
A:GLU354
|
5.0
|
57.3
|
1.0
|
|
Fluorine binding site 5 out
of 18 in 1e7b
Go back to
Fluorine Binding Sites List in 1e7b
Fluorine binding site 5 out
of 18 in the Crystal Structure of Human Serum Albumin Complexed with the General Anesthetic Halothane
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 5 of Crystal Structure of Human Serum Albumin Complexed with the General Anesthetic Halothane within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F4002
b:70.4
occ:0.47
|
F2
|
A:HLT4002
|
0.0
|
70.4
|
0.5
|
C2
|
A:HLT4002
|
1.3
|
71.6
|
0.5
|
F3
|
A:HLT4002
|
2.2
|
70.8
|
0.5
|
F1
|
A:HLT4002
|
2.2
|
70.2
|
0.5
|
C1
|
A:HLT4002
|
2.3
|
72.2
|
0.5
|
BR
|
A:HLT4002
|
3.1
|
78.7
|
0.5
|
CB
|
A:ALA350
|
3.3
|
38.2
|
1.0
|
CL
|
A:HLT4002
|
3.9
|
71.3
|
0.5
|
O
|
A:LEU347
|
3.9
|
39.6
|
1.0
|
N
|
A:LYS351
|
3.9
|
39.6
|
1.0
|
C
|
A:ALA350
|
4.0
|
39.1
|
1.0
|
CD2
|
A:LEU347
|
4.1
|
35.8
|
1.0
|
O
|
A:HOH2016
|
4.2
|
90.1
|
1.0
|
CA
|
A:ALA350
|
4.3
|
39.1
|
1.0
|
CA
|
A:LYS351
|
4.4
|
42.3
|
1.0
|
O
|
A:ALA350
|
4.4
|
40.9
|
1.0
|
CB
|
A:ALA213
|
4.6
|
42.5
|
1.0
|
CA
|
A:LEU347
|
4.6
|
34.7
|
1.0
|
CD2
|
A:LEU331
|
4.6
|
43.0
|
1.0
|
C
|
A:LEU347
|
4.7
|
36.6
|
1.0
|
CB
|
A:LYS351
|
4.7
|
45.3
|
1.0
|
CL
|
A:HLT4001
|
4.9
|
73.4
|
0.5
|
CB
|
A:LEU347
|
4.9
|
34.9
|
1.0
|
|
Fluorine binding site 6 out
of 18 in 1e7b
Go back to
Fluorine Binding Sites List in 1e7b
Fluorine binding site 6 out
of 18 in the Crystal Structure of Human Serum Albumin Complexed with the General Anesthetic Halothane
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 6 of Crystal Structure of Human Serum Albumin Complexed with the General Anesthetic Halothane within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F4002
b:70.8
occ:0.47
|
F3
|
A:HLT4002
|
0.0
|
70.8
|
0.5
|
C2
|
A:HLT4002
|
1.3
|
71.6
|
0.5
|
F1
|
A:HLT4002
|
2.2
|
70.2
|
0.5
|
F2
|
A:HLT4002
|
2.2
|
70.4
|
0.5
|
C1
|
A:HLT4002
|
2.3
|
72.2
|
0.5
|
O
|
A:HOH2016
|
2.3
|
90.1
|
1.0
|
CL
|
A:HLT4002
|
3.0
|
71.3
|
0.5
|
BR
|
A:HLT4002
|
3.0
|
78.7
|
0.5
|
OE1
|
A:GLU354
|
3.2
|
57.3
|
1.0
|
NH1
|
A:ARG209
|
3.9
|
85.5
|
1.0
|
CL
|
A:HLT4001
|
4.2
|
73.4
|
0.5
|
CD
|
A:GLU354
|
4.2
|
54.9
|
1.0
|
CA
|
A:LYS351
|
4.3
|
42.3
|
1.0
|
CD
|
A:LYS351
|
4.4
|
57.2
|
1.0
|
N
|
A:LYS351
|
4.5
|
39.6
|
1.0
|
O
|
A:ALA350
|
4.6
|
40.9
|
1.0
|
C
|
A:ALA350
|
4.6
|
39.1
|
1.0
|
CZ
|
A:ARG209
|
4.6
|
84.4
|
1.0
|
CB
|
A:LYS351
|
4.6
|
45.3
|
1.0
|
OE2
|
A:GLU354
|
4.8
|
55.6
|
1.0
|
CD1
|
A:LEU327
|
4.8
|
40.5
|
1.0
|
NH2
|
A:ARG209
|
4.8
|
84.8
|
1.0
|
CB
|
A:ALA350
|
4.8
|
38.2
|
1.0
|
CB
|
A:GLU354
|
4.9
|
47.9
|
1.0
|
|
Fluorine binding site 7 out
of 18 in 1e7b
Go back to
Fluorine Binding Sites List in 1e7b
Fluorine binding site 7 out
of 18 in the Crystal Structure of Human Serum Albumin Complexed with the General Anesthetic Halothane
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 7 of Crystal Structure of Human Serum Albumin Complexed with the General Anesthetic Halothane within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F4003
b:85.5
occ:0.54
|
F1
|
A:HLT4003
|
0.0
|
85.5
|
0.5
|
C2
|
A:HLT4003
|
1.3
|
86.8
|
0.5
|
F2
|
A:HLT4003
|
2.2
|
86.7
|
0.5
|
F3
|
A:HLT4003
|
2.2
|
84.6
|
0.5
|
C1
|
A:HLT4003
|
2.3
|
87.7
|
0.5
|
CL
|
A:HLT4003
|
2.9
|
87.0
|
0.5
|
O
|
A:HOH2008
|
3.0
|
48.8
|
1.0
|
CD2
|
A:LEU453
|
3.3
|
43.0
|
1.0
|
CD1
|
A:LEU453
|
3.8
|
41.4
|
1.0
|
BR
|
A:HLT4003
|
4.0
|
95.3
|
0.5
|
CG
|
A:LEU453
|
4.1
|
41.3
|
1.0
|
O
|
A:LEU430
|
4.6
|
42.6
|
1.0
|
CD2
|
A:LEU430
|
4.8
|
44.0
|
1.0
|
|
Fluorine binding site 8 out
of 18 in 1e7b
Go back to
Fluorine Binding Sites List in 1e7b
Fluorine binding site 8 out
of 18 in the Crystal Structure of Human Serum Albumin Complexed with the General Anesthetic Halothane
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 8 of Crystal Structure of Human Serum Albumin Complexed with the General Anesthetic Halothane within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F4003
b:86.7
occ:0.54
|
F2
|
A:HLT4003
|
0.0
|
86.7
|
0.5
|
C2
|
A:HLT4003
|
1.3
|
86.8
|
0.5
|
F3
|
A:HLT4003
|
2.2
|
84.6
|
0.5
|
F1
|
A:HLT4003
|
2.2
|
85.5
|
0.5
|
C1
|
A:HLT4003
|
2.4
|
87.7
|
0.5
|
CE2
|
A:PHE403
|
3.2
|
54.8
|
1.0
|
BR
|
A:HLT4003
|
3.2
|
95.3
|
0.5
|
CZ
|
A:PHE403
|
3.2
|
53.5
|
1.0
|
CL
|
A:HLT4003
|
3.9
|
87.0
|
0.5
|
CD1
|
A:LEU407
|
4.0
|
35.1
|
1.0
|
OD1
|
A:ASN391
|
4.0
|
53.2
|
1.0
|
O
|
A:HOH2008
|
4.0
|
48.8
|
1.0
|
O
|
A:LEU430
|
4.2
|
42.6
|
1.0
|
CD2
|
A:LEU407
|
4.3
|
37.7
|
1.0
|
CB
|
A:ASN391
|
4.3
|
51.6
|
1.0
|
CG
|
A:ASN391
|
4.4
|
52.4
|
1.0
|
CD2
|
A:PHE403
|
4.5
|
55.2
|
1.0
|
CE1
|
A:PHE403
|
4.5
|
53.1
|
1.0
|
CG
|
A:LEU407
|
4.7
|
36.4
|
1.0
|
C
|
A:LEU430
|
4.8
|
43.7
|
1.0
|
|
Fluorine binding site 9 out
of 18 in 1e7b
Go back to
Fluorine Binding Sites List in 1e7b
Fluorine binding site 9 out
of 18 in the Crystal Structure of Human Serum Albumin Complexed with the General Anesthetic Halothane
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 9 of Crystal Structure of Human Serum Albumin Complexed with the General Anesthetic Halothane within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F4003
b:84.6
occ:0.54
|
F3
|
A:HLT4003
|
0.0
|
84.6
|
0.5
|
C2
|
A:HLT4003
|
1.3
|
86.8
|
0.5
|
F2
|
A:HLT4003
|
2.2
|
86.7
|
0.5
|
F1
|
A:HLT4003
|
2.2
|
85.5
|
0.5
|
C1
|
A:HLT4003
|
2.4
|
87.7
|
0.5
|
O
|
A:LEU430
|
2.8
|
42.6
|
1.0
|
CL
|
A:HLT4003
|
3.0
|
87.0
|
0.5
|
BR
|
A:HLT4003
|
3.0
|
95.3
|
0.5
|
CB
|
A:VAL433
|
3.2
|
58.0
|
1.0
|
CG2
|
A:VAL433
|
3.6
|
57.7
|
1.0
|
CG1
|
A:VAL433
|
3.8
|
58.4
|
1.0
|
C
|
A:LEU430
|
3.8
|
43.7
|
1.0
|
CD2
|
A:LEU453
|
3.9
|
43.0
|
1.0
|
CE2
|
A:PHE403
|
4.3
|
54.8
|
1.0
|
CA
|
A:VAL433
|
4.4
|
54.7
|
1.0
|
CA
|
A:LEU430
|
4.5
|
43.1
|
1.0
|
N
|
A:GLY434
|
4.5
|
53.0
|
1.0
|
N
|
A:VAL433
|
4.6
|
55.3
|
1.0
|
N
|
A:GLY431
|
4.7
|
45.8
|
1.0
|
C
|
A:VAL433
|
4.7
|
53.5
|
1.0
|
CB
|
A:LEU430
|
4.7
|
44.0
|
1.0
|
CG
|
A:LEU453
|
4.8
|
41.3
|
1.0
|
CA
|
A:GLY431
|
4.8
|
49.2
|
1.0
|
CD1
|
A:LEU407
|
4.9
|
35.1
|
1.0
|
CZ
|
A:PHE403
|
4.9
|
53.5
|
1.0
|
O
|
A:HOH2008
|
4.9
|
48.8
|
1.0
|
|
Fluorine binding site 10 out
of 18 in 1e7b
Go back to
Fluorine Binding Sites List in 1e7b
Fluorine binding site 10 out
of 18 in the Crystal Structure of Human Serum Albumin Complexed with the General Anesthetic Halothane
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 10 of Crystal Structure of Human Serum Albumin Complexed with the General Anesthetic Halothane within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:F4001
b:91.9
occ:0.52
|
F1
|
B:HLT4001
|
0.0
|
91.9
|
0.5
|
C2
|
B:HLT4001
|
1.3
|
92.1
|
0.5
|
F2
|
B:HLT4001
|
2.2
|
91.5
|
0.5
|
F3
|
B:HLT4001
|
2.2
|
92.0
|
0.5
|
C1
|
B:HLT4001
|
2.3
|
92.3
|
0.5
|
CL
|
B:HLT4001
|
2.7
|
91.5
|
0.5
|
OD1
|
B:ASP324
|
2.8
|
81.4
|
1.0
|
BR
|
B:HLT4001
|
3.2
|
95.5
|
0.5
|
CG
|
B:ASP324
|
3.4
|
79.8
|
1.0
|
O
|
B:ASP324
|
3.7
|
73.3
|
1.0
|
CB
|
B:ASP324
|
3.9
|
77.7
|
1.0
|
OD2
|
B:ASP324
|
4.2
|
80.4
|
1.0
|
CG
|
B:ARG209
|
4.2
|
75.5
|
1.0
|
NE
|
B:ARG209
|
4.3
|
90.8
|
1.0
|
CA
|
B:ASP324
|
4.3
|
76.1
|
1.0
|
C
|
B:ASP324
|
4.4
|
73.8
|
1.0
|
CD
|
B:ARG209
|
4.9
|
83.8
|
1.0
|
O
|
B:ARG209
|
5.0
|
60.2
|
1.0
|
|
Reference:
A.A.Bhattacharya,
S.Curry,
N.P.Franks.
Binding of the General Anesthetics Propofol and Halothane to Human Serum Albumin. High Resolution Crystal Structures J.Biol.Chem. V. 275 38731 2000.
ISSN: ISSN 0021-9258
PubMed: 10940303
DOI: 10.1074/JBC.M005460200
Page generated: Wed Jul 31 11:09:40 2024
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