Atomistry » Fluorine » PDB 1fko-1h1d » 1fq8
Atomistry »
  Fluorine »
    PDB 1fko-1h1d »
      1fq8 »

Fluorine in PDB 1fq8: X-Ray Structure of Difluorostatine Inhibitor CP81,198 Bound to Saccharopepsin

Enzymatic activity of X-Ray Structure of Difluorostatine Inhibitor CP81,198 Bound to Saccharopepsin

All present enzymatic activity of X-Ray Structure of Difluorostatine Inhibitor CP81,198 Bound to Saccharopepsin:
3.4.23.25;

Protein crystallography data

The structure of X-Ray Structure of Difluorostatine Inhibitor CP81,198 Bound to Saccharopepsin, PDB code: 1fq8 was solved by N.B.Cronin, M.O.Badasso, I.J.Tickle, T.Dreyer, D.J.Hoover, R.L.Rosati, C.C.Humblet, E.A.Lunney, J.B.Cooper, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 15.40 / 2.80
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 86.820, 86.820, 110.240, 90.00, 90.00, 120.00
R / Rfree (%) n/a / n/a

Fluorine Binding Sites:

The binding sites of Fluorine atom in the X-Ray Structure of Difluorostatine Inhibitor CP81,198 Bound to Saccharopepsin (pdb code 1fq8). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total 2 binding sites of Fluorine where determined in the X-Ray Structure of Difluorostatine Inhibitor CP81,198 Bound to Saccharopepsin, PDB code: 1fq8:
Jump to Fluorine binding site number: 1; 2;

Fluorine binding site 1 out of 2 in 1fq8

Go back to Fluorine Binding Sites List in 1fq8
Fluorine binding site 1 out of 2 in the X-Ray Structure of Difluorostatine Inhibitor CP81,198 Bound to Saccharopepsin


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of X-Ray Structure of Difluorostatine Inhibitor CP81,198 Bound to Saccharopepsin within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F400

b:35.3
occ:1.00
F1 A:2Y4400 0.0 35.3 1.0
C30 A:2Y4400 1.4 40.6 1.0
F2 A:2Y4400 2.1 36.1 1.0
C31 A:2Y4400 2.3 17.9 1.0
C29 A:2Y4400 2.4 1.8 1.0
O6 A:2Y4400 2.4 18.8 1.0
O5 A:2Y4400 2.9 11.2 1.0
C21 A:2Y4400 3.0 15.6 1.0
N4 A:2Y4400 3.0 23.2 1.0
N5 A:2Y4400 3.3 21.2 1.0
C16 A:2Y4400 3.5 26.3 1.0
C18 A:2Y4400 3.8 22.3 1.0
O4 A:2Y4400 3.8 28.9 1.0
OD2 A:ASP215 3.9 21.8 1.0
O A:HOH645 4.0 25.6 1.0
C20 A:2Y4400 4.1 38.2 1.0
OG1 A:THR218 4.1 19.8 1.0
N A:GLY76 4.4 23.6 1.0
C15 A:2Y4400 4.4 24.0 1.0
C22 A:2Y4400 4.5 21.1 1.0
C19 A:2Y4400 4.5 20.7 1.0
C17 A:2Y4400 4.6 30.9 1.0
C32 A:2Y4400 4.7 31.1 1.0
CA A:GLY76 4.9 26.7 1.0
CG A:ASP215 5.0 14.1 1.0

Fluorine binding site 2 out of 2 in 1fq8

Go back to Fluorine Binding Sites List in 1fq8
Fluorine binding site 2 out of 2 in the X-Ray Structure of Difluorostatine Inhibitor CP81,198 Bound to Saccharopepsin


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 2 of X-Ray Structure of Difluorostatine Inhibitor CP81,198 Bound to Saccharopepsin within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F400

b:36.1
occ:1.00
F2 A:2Y4400 0.0 36.1 1.0
C30 A:2Y4400 1.4 40.6 1.0
F1 A:2Y4400 2.1 35.3 1.0
C31 A:2Y4400 2.3 17.9 1.0
C29 A:2Y4400 2.4 1.8 1.0
N5 A:2Y4400 2.5 21.2 1.0
O5 A:2Y4400 2.7 11.2 1.0
O6 A:2Y4400 3.2 18.8 1.0
OD2 A:ASP215 3.5 21.8 1.0
O A:GLY34 3.5 22.7 1.0
C A:GLY34 3.7 17.8 1.0
O A:HOH645 3.7 25.6 1.0
CA A:GLY34 3.7 8.6 1.0
C21 A:2Y4400 3.8 15.6 1.0
C32 A:2Y4400 3.9 31.1 1.0
CG A:ASP215 4.4 14.1 1.0
N4 A:2Y4400 4.4 23.2 1.0
N A:SER35 4.4 21.7 1.0
CE1 A:TYR189 4.5 33.7 1.0
OD1 A:ASP32 4.6 19.9 1.0
OD2 A:ASP32 4.6 13.6 1.0
OD1 A:ASP215 4.7 19.6 1.0
N A:GLY34 4.8 19.1 1.0
CD1 A:TYR189 4.9 27.1 1.0
C22 A:2Y4400 4.9 21.1 1.0
OG1 A:THR218 4.9 19.8 1.0
CG A:ASP32 5.0 18.4 1.0

Reference:

N.B.Cronin, M.O.Badasso, I.J Tickle, T.Dreyer, D.J.Hoover, R.L.Rosati, C.C.Humblet, E.A.Lunney, J.B.Cooper. X-Ray Structures of Five Renin Inhibitors Bound to Saccharopepsin: Exploration of Active-Site Specificity. J.Mol.Biol. V. 303 745 2000.
ISSN: ISSN 0022-2836
PubMed: 11061973
DOI: 10.1006/JMBI.2000.4181
Page generated: Sun Dec 13 11:29:32 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy