Fluorine in PDB 1fqj: Crystal Structure of the Heterotrimeric Complex of the Rgs Domain of RGS9, the Gamma Subunit of Phosphodiesterase and the Gt/I1 Chimera Alpha Subunit [(RGS9)-(Pdegamma)-(Gt/I1ALPHA)-(Gdp)-(ALF4-)-(MG2+)]
Enzymatic activity of Crystal Structure of the Heterotrimeric Complex of the Rgs Domain of RGS9, the Gamma Subunit of Phosphodiesterase and the Gt/I1 Chimera Alpha Subunit [(RGS9)-(Pdegamma)-(Gt/I1ALPHA)-(Gdp)-(ALF4-)-(MG2+)]
All present enzymatic activity of Crystal Structure of the Heterotrimeric Complex of the Rgs Domain of RGS9, the Gamma Subunit of Phosphodiesterase and the Gt/I1 Chimera Alpha Subunit [(RGS9)-(Pdegamma)-(Gt/I1ALPHA)-(Gdp)-(ALF4-)-(MG2+)]:
3.1.4.35;
Protein crystallography data
The structure of Crystal Structure of the Heterotrimeric Complex of the Rgs Domain of RGS9, the Gamma Subunit of Phosphodiesterase and the Gt/I1 Chimera Alpha Subunit [(RGS9)-(Pdegamma)-(Gt/I1ALPHA)-(Gdp)-(ALF4-)-(MG2+)], PDB code: 1fqj
was solved by
K.C.Slep,
M.A.Kercher,
W.He,
C.W.Cowan,
T.G.Wensel,
P.B.Sigler,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
50.00 /
2.02
|
Space group
|
P 21 21 21
|
Cell size a, b, c (Å), α, β, γ (°)
|
91.609,
115.937,
134.188,
90.00,
90.00,
90.00
|
R / Rfree (%)
|
23.3 /
26.5
|
Other elements in 1fqj:
The structure of Crystal Structure of the Heterotrimeric Complex of the Rgs Domain of RGS9, the Gamma Subunit of Phosphodiesterase and the Gt/I1 Chimera Alpha Subunit [(RGS9)-(Pdegamma)-(Gt/I1ALPHA)-(Gdp)-(ALF4-)-(MG2+)] also contains other interesting chemical elements:
Fluorine Binding Sites:
The binding sites of Fluorine atom in the Crystal Structure of the Heterotrimeric Complex of the Rgs Domain of RGS9, the Gamma Subunit of Phosphodiesterase and the Gt/I1 Chimera Alpha Subunit [(RGS9)-(Pdegamma)-(Gt/I1ALPHA)-(Gdp)-(ALF4-)-(MG2+)]
(pdb code 1fqj). This binding sites where shown within
5.0 Angstroms radius around Fluorine atom.
In total 8 binding sites of Fluorine where determined in the
Crystal Structure of the Heterotrimeric Complex of the Rgs Domain of RGS9, the Gamma Subunit of Phosphodiesterase and the Gt/I1 Chimera Alpha Subunit [(RGS9)-(Pdegamma)-(Gt/I1ALPHA)-(Gdp)-(ALF4-)-(MG2+)], PDB code: 1fqj:
Jump to Fluorine binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
Fluorine binding site 1 out
of 8 in 1fqj
Go back to
Fluorine Binding Sites List in 1fqj
Fluorine binding site 1 out
of 8 in the Crystal Structure of the Heterotrimeric Complex of the Rgs Domain of RGS9, the Gamma Subunit of Phosphodiesterase and the Gt/I1 Chimera Alpha Subunit [(RGS9)-(Pdegamma)-(Gt/I1ALPHA)-(Gdp)-(ALF4-)-(MG2+)]
 Mono view
 Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 1 of Crystal Structure of the Heterotrimeric Complex of the Rgs Domain of RGS9, the Gamma Subunit of Phosphodiesterase and the Gt/I1 Chimera Alpha Subunit [(RGS9)-(Pdegamma)-(Gt/I1ALPHA)-(Gdp)-(ALF4-)-(MG2+)] within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F362
b:25.1
occ:1.00
|
F1
|
A:ALF362
|
0.0
|
25.1
|
1.0
|
AL
|
A:ALF362
|
1.8
|
17.7
|
1.0
|
F4
|
A:ALF362
|
2.4
|
21.6
|
1.0
|
F3
|
A:ALF362
|
2.6
|
22.9
|
1.0
|
O
|
A:HOH363
|
2.7
|
12.2
|
1.0
|
NH1
|
A:ARG174
|
2.7
|
7.9
|
1.0
|
O
|
A:HOH364
|
2.8
|
10.1
|
1.0
|
N
|
A:THR177
|
2.9
|
12.1
|
1.0
|
O3B
|
A:GDP360
|
3.0
|
15.2
|
1.0
|
MG
|
A:MG352
|
3.1
|
17.1
|
1.0
|
NH2
|
A:ARG174
|
3.3
|
8.4
|
1.0
|
CZ
|
A:ARG174
|
3.4
|
13.4
|
1.0
|
CA
|
A:LYS176
|
3.4
|
18.7
|
1.0
|
F2
|
A:ALF362
|
3.5
|
16.4
|
1.0
|
OG1
|
A:THR177
|
3.6
|
20.0
|
1.0
|
C
|
A:LYS176
|
3.7
|
12.8
|
1.0
|
O2B
|
A:GDP360
|
3.7
|
10.4
|
1.0
|
O
|
A:VAL175
|
3.7
|
17.2
|
1.0
|
CB
|
A:THR177
|
3.9
|
21.9
|
1.0
|
PB
|
A:GDP360
|
3.9
|
15.0
|
1.0
|
CA
|
A:THR177
|
4.0
|
14.9
|
1.0
|
CG
|
A:LYS176
|
4.1
|
19.8
|
1.0
|
O2A
|
A:GDP360
|
4.3
|
12.7
|
1.0
|
CB
|
A:LYS176
|
4.3
|
19.9
|
1.0
|
N
|
A:LYS176
|
4.4
|
15.9
|
1.0
|
C
|
A:VAL175
|
4.4
|
19.1
|
1.0
|
O
|
A:THR177
|
4.4
|
14.7
|
1.0
|
NE
|
A:ARG174
|
4.6
|
15.0
|
1.0
|
O3A
|
A:GDP360
|
4.6
|
11.6
|
1.0
|
C
|
A:THR177
|
4.7
|
14.9
|
1.0
|
OE1
|
A:GLN200
|
4.8
|
11.7
|
1.0
|
NE2
|
A:GLN200
|
4.8
|
12.6
|
1.0
|
O
|
A:HOH365
|
4.8
|
14.3
|
1.0
|
N
|
A:GLU39
|
4.8
|
19.2
|
1.0
|
O
|
A:LYS176
|
4.9
|
13.6
|
1.0
|
|
Fluorine binding site 2 out
of 8 in 1fqj
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Fluorine Binding Sites List in 1fqj
Fluorine binding site 2 out
of 8 in the Crystal Structure of the Heterotrimeric Complex of the Rgs Domain of RGS9, the Gamma Subunit of Phosphodiesterase and the Gt/I1 Chimera Alpha Subunit [(RGS9)-(Pdegamma)-(Gt/I1ALPHA)-(Gdp)-(ALF4-)-(MG2+)]
 Mono view
 Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 2 of Crystal Structure of the Heterotrimeric Complex of the Rgs Domain of RGS9, the Gamma Subunit of Phosphodiesterase and the Gt/I1 Chimera Alpha Subunit [(RGS9)-(Pdegamma)-(Gt/I1ALPHA)-(Gdp)-(ALF4-)-(MG2+)] within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F362
b:16.4
occ:1.00
|
F2
|
A:ALF362
|
0.0
|
16.4
|
1.0
|
AL
|
A:ALF362
|
1.8
|
17.7
|
1.0
|
F3
|
A:ALF362
|
2.5
|
22.9
|
1.0
|
NZ
|
A:LYS42
|
2.5
|
10.9
|
1.0
|
F4
|
A:ALF362
|
2.5
|
21.6
|
1.0
|
N
|
A:GLY199
|
2.9
|
13.8
|
1.0
|
O3B
|
A:GDP360
|
2.9
|
15.2
|
1.0
|
O
|
A:HOH363
|
3.1
|
12.2
|
1.0
|
CA
|
A:GLY38
|
3.3
|
14.3
|
1.0
|
CA
|
A:GLY199
|
3.4
|
13.1
|
1.0
|
N
|
A:GLU39
|
3.4
|
19.2
|
1.0
|
O1B
|
A:GDP360
|
3.5
|
16.2
|
1.0
|
F1
|
A:ALF362
|
3.5
|
25.1
|
1.0
|
PB
|
A:GDP360
|
3.6
|
15.0
|
1.0
|
O
|
A:ALA37
|
3.7
|
16.1
|
1.0
|
C
|
A:GLY38
|
3.8
|
17.3
|
1.0
|
CE
|
A:LYS42
|
3.9
|
16.1
|
1.0
|
C
|
A:GLY198
|
3.9
|
18.0
|
1.0
|
O2B
|
A:GDP360
|
4.0
|
10.4
|
1.0
|
N
|
A:GLY38
|
4.1
|
15.2
|
1.0
|
C
|
A:ALA37
|
4.2
|
15.8
|
1.0
|
CA
|
A:GLY198
|
4.3
|
21.1
|
1.0
|
OE1
|
A:GLN200
|
4.3
|
11.7
|
1.0
|
C
|
A:GLY199
|
4.4
|
15.2
|
1.0
|
NE2
|
A:GLN200
|
4.4
|
12.6
|
1.0
|
MG
|
A:MG352
|
4.4
|
17.1
|
1.0
|
CA
|
A:GLU39
|
4.5
|
23.6
|
1.0
|
O
|
A:VAL197
|
4.5
|
16.9
|
1.0
|
N
|
A:GLN200
|
4.6
|
12.6
|
1.0
|
O
|
A:HOH365
|
4.6
|
14.3
|
1.0
|
CD
|
A:GLN200
|
4.7
|
16.4
|
1.0
|
CD
|
A:LYS42
|
4.8
|
24.6
|
1.0
|
O
|
A:GLY36
|
4.9
|
14.9
|
1.0
|
O3A
|
A:GDP360
|
4.9
|
11.6
|
1.0
|
N
|
A:SER40
|
4.9
|
12.3
|
1.0
|
O
|
A:GLY38
|
4.9
|
12.3
|
1.0
|
O
|
A:GLY198
|
5.0
|
17.9
|
1.0
|
|
Fluorine binding site 3 out
of 8 in 1fqj
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Fluorine Binding Sites List in 1fqj
Fluorine binding site 3 out
of 8 in the Crystal Structure of the Heterotrimeric Complex of the Rgs Domain of RGS9, the Gamma Subunit of Phosphodiesterase and the Gt/I1 Chimera Alpha Subunit [(RGS9)-(Pdegamma)-(Gt/I1ALPHA)-(Gdp)-(ALF4-)-(MG2+)]
 Mono view
 Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 3 of Crystal Structure of the Heterotrimeric Complex of the Rgs Domain of RGS9, the Gamma Subunit of Phosphodiesterase and the Gt/I1 Chimera Alpha Subunit [(RGS9)-(Pdegamma)-(Gt/I1ALPHA)-(Gdp)-(ALF4-)-(MG2+)] within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F362
b:22.9
occ:1.00
|
F3
|
A:ALF362
|
0.0
|
22.9
|
1.0
|
AL
|
A:ALF362
|
1.8
|
17.7
|
1.0
|
F2
|
A:ALF362
|
2.5
|
16.4
|
1.0
|
O3B
|
A:GDP360
|
2.5
|
15.2
|
1.0
|
F1
|
A:ALF362
|
2.6
|
25.1
|
1.0
|
N
|
A:GLU39
|
2.6
|
19.2
|
1.0
|
NE2
|
A:GLN200
|
3.0
|
12.6
|
1.0
|
NH2
|
A:ARG174
|
3.0
|
8.4
|
1.0
|
O
|
A:HOH363
|
3.2
|
12.2
|
1.0
|
NH1
|
A:ARG174
|
3.3
|
7.9
|
1.0
|
CA
|
A:GLY38
|
3.3
|
14.3
|
1.0
|
C
|
A:GLY38
|
3.4
|
17.3
|
1.0
|
F4
|
A:ALF362
|
3.5
|
21.6
|
1.0
|
CA
|
A:GLU39
|
3.6
|
23.6
|
1.0
|
CG
|
A:GLU39
|
3.6
|
28.4
|
1.0
|
CZ
|
A:ARG174
|
3.6
|
13.4
|
1.0
|
CD
|
A:GLN200
|
3.8
|
16.4
|
1.0
|
OE1
|
A:GLN200
|
3.8
|
11.7
|
1.0
|
PB
|
A:GDP360
|
4.0
|
15.0
|
1.0
|
CB
|
A:GLU39
|
4.2
|
17.7
|
1.0
|
O1B
|
A:GDP360
|
4.5
|
16.2
|
1.0
|
O2B
|
A:GDP360
|
4.5
|
10.4
|
1.0
|
O
|
A:GLY38
|
4.6
|
12.3
|
1.0
|
O
|
A:HOH415
|
4.7
|
27.8
|
1.0
|
O3A
|
A:GDP360
|
4.7
|
11.6
|
1.0
|
N
|
A:GLY199
|
4.7
|
13.8
|
1.0
|
N
|
A:GLY38
|
4.7
|
15.2
|
1.0
|
CG
|
A:LYS176
|
4.8
|
19.8
|
1.0
|
NZ
|
A:LYS42
|
4.8
|
10.9
|
1.0
|
CD
|
A:GLU39
|
4.9
|
45.3
|
1.0
|
C
|
A:GLU39
|
4.9
|
23.1
|
1.0
|
NE
|
A:ARG174
|
4.9
|
15.0
|
1.0
|
O
|
A:HOH364
|
4.9
|
10.1
|
1.0
|
|
Fluorine binding site 4 out
of 8 in 1fqj
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Fluorine Binding Sites List in 1fqj
Fluorine binding site 4 out
of 8 in the Crystal Structure of the Heterotrimeric Complex of the Rgs Domain of RGS9, the Gamma Subunit of Phosphodiesterase and the Gt/I1 Chimera Alpha Subunit [(RGS9)-(Pdegamma)-(Gt/I1ALPHA)-(Gdp)-(ALF4-)-(MG2+)]
 Mono view
 Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 4 of Crystal Structure of the Heterotrimeric Complex of the Rgs Domain of RGS9, the Gamma Subunit of Phosphodiesterase and the Gt/I1 Chimera Alpha Subunit [(RGS9)-(Pdegamma)-(Gt/I1ALPHA)-(Gdp)-(ALF4-)-(MG2+)] within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F362
b:21.6
occ:1.00
|
F4
|
A:ALF362
|
0.0
|
21.6
|
1.0
|
AL
|
A:ALF362
|
1.8
|
17.7
|
1.0
|
MG
|
A:MG352
|
2.2
|
17.1
|
1.0
|
F1
|
A:ALF362
|
2.4
|
25.1
|
1.0
|
F2
|
A:ALF362
|
2.5
|
16.4
|
1.0
|
O
|
A:HOH363
|
2.6
|
12.2
|
1.0
|
O
|
A:HOH365
|
2.7
|
14.3
|
1.0
|
O2B
|
A:GDP360
|
3.0
|
10.4
|
1.0
|
OG1
|
A:THR177
|
3.2
|
20.0
|
1.0
|
CB
|
A:THR177
|
3.2
|
21.9
|
1.0
|
O3B
|
A:GDP360
|
3.4
|
15.2
|
1.0
|
O
|
A:HOH364
|
3.5
|
10.1
|
1.0
|
PB
|
A:GDP360
|
3.5
|
15.0
|
1.0
|
F3
|
A:ALF362
|
3.5
|
22.9
|
1.0
|
O
|
A:VAL197
|
3.6
|
16.9
|
1.0
|
CA
|
A:GLY198
|
3.8
|
21.1
|
1.0
|
NZ
|
A:LYS42
|
3.8
|
10.9
|
1.0
|
N
|
A:THR177
|
3.9
|
12.1
|
1.0
|
N
|
A:GLY199
|
4.0
|
13.8
|
1.0
|
CA
|
A:THR177
|
4.1
|
14.9
|
1.0
|
O1B
|
A:GDP360
|
4.2
|
16.2
|
1.0
|
OG
|
A:SER43
|
4.3
|
17.7
|
1.0
|
O
|
A:THR177
|
4.3
|
14.7
|
1.0
|
C
|
A:GLY198
|
4.4
|
18.0
|
1.0
|
CG2
|
A:THR177
|
4.4
|
26.5
|
1.0
|
CE
|
A:LYS42
|
4.5
|
16.1
|
1.0
|
C
|
A:VAL197
|
4.5
|
17.2
|
1.0
|
N
|
A:GLY198
|
4.6
|
14.9
|
1.0
|
C
|
A:THR177
|
4.6
|
14.9
|
1.0
|
NH1
|
A:ARG174
|
4.8
|
7.9
|
1.0
|
O3A
|
A:GDP360
|
4.8
|
11.6
|
1.0
|
|
Fluorine binding site 5 out
of 8 in 1fqj
Go back to
Fluorine Binding Sites List in 1fqj
Fluorine binding site 5 out
of 8 in the Crystal Structure of the Heterotrimeric Complex of the Rgs Domain of RGS9, the Gamma Subunit of Phosphodiesterase and the Gt/I1 Chimera Alpha Subunit [(RGS9)-(Pdegamma)-(Gt/I1ALPHA)-(Gdp)-(ALF4-)-(MG2+)]
 Mono view
 Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 5 of Crystal Structure of the Heterotrimeric Complex of the Rgs Domain of RGS9, the Gamma Subunit of Phosphodiesterase and the Gt/I1 Chimera Alpha Subunit [(RGS9)-(Pdegamma)-(Gt/I1ALPHA)-(Gdp)-(ALF4-)-(MG2+)] within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:F363
b:14.0
occ:1.00
|
F1
|
D:ALF363
|
0.0
|
14.0
|
1.0
|
AL
|
D:ALF363
|
1.8
|
16.5
|
1.0
|
MG
|
D:MG352
|
2.2
|
22.7
|
1.0
|
F4
|
D:ALF363
|
2.4
|
18.8
|
1.0
|
F3
|
D:ALF363
|
2.5
|
20.8
|
1.0
|
O
|
D:HOH366
|
2.6
|
15.5
|
1.0
|
O2B
|
D:GDP361
|
2.8
|
15.1
|
1.0
|
O
|
D:HOH364
|
2.8
|
12.2
|
1.0
|
CB
|
D:THR177
|
3.3
|
14.4
|
1.0
|
OG1
|
D:THR177
|
3.3
|
18.4
|
1.0
|
O3B
|
D:GDP361
|
3.4
|
29.6
|
1.0
|
PB
|
D:GDP361
|
3.5
|
20.4
|
1.0
|
F2
|
D:ALF363
|
3.5
|
14.3
|
1.0
|
O
|
D:VAL197
|
3.6
|
28.8
|
1.0
|
O
|
D:HOH365
|
3.6
|
8.4
|
1.0
|
CE
|
D:LYS42
|
3.8
|
17.1
|
1.0
|
N
|
D:THR177
|
3.8
|
10.0
|
1.0
|
NZ
|
D:LYS42
|
3.9
|
17.9
|
1.0
|
CA
|
D:GLY198
|
4.0
|
15.4
|
1.0
|
CA
|
D:THR177
|
4.1
|
15.2
|
1.0
|
N
|
D:GLY199
|
4.1
|
15.7
|
1.0
|
OG
|
D:SER43
|
4.2
|
15.1
|
1.0
|
O1B
|
D:GDP361
|
4.2
|
15.2
|
1.0
|
CG2
|
D:THR177
|
4.4
|
12.4
|
1.0
|
O
|
D:THR177
|
4.4
|
13.2
|
1.0
|
C
|
D:VAL197
|
4.5
|
26.8
|
1.0
|
C
|
D:GLY198
|
4.5
|
12.8
|
1.0
|
C
|
D:THR177
|
4.7
|
21.4
|
1.0
|
N
|
D:GLY198
|
4.7
|
20.9
|
1.0
|
O3A
|
D:GDP361
|
4.7
|
15.2
|
1.0
|
NH1
|
D:ARG174
|
4.8
|
11.4
|
1.0
|
|
Fluorine binding site 6 out
of 8 in 1fqj
Go back to
Fluorine Binding Sites List in 1fqj
Fluorine binding site 6 out
of 8 in the Crystal Structure of the Heterotrimeric Complex of the Rgs Domain of RGS9, the Gamma Subunit of Phosphodiesterase and the Gt/I1 Chimera Alpha Subunit [(RGS9)-(Pdegamma)-(Gt/I1ALPHA)-(Gdp)-(ALF4-)-(MG2+)]
 Mono view
 Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 6 of Crystal Structure of the Heterotrimeric Complex of the Rgs Domain of RGS9, the Gamma Subunit of Phosphodiesterase and the Gt/I1 Chimera Alpha Subunit [(RGS9)-(Pdegamma)-(Gt/I1ALPHA)-(Gdp)-(ALF4-)-(MG2+)] within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:F363
b:14.3
occ:1.00
|
F2
|
D:ALF363
|
0.0
|
14.3
|
1.0
|
AL
|
D:ALF363
|
1.8
|
16.5
|
1.0
|
F3
|
D:ALF363
|
2.5
|
20.8
|
1.0
|
F4
|
D:ALF363
|
2.6
|
18.8
|
1.0
|
O
|
D:HOH364
|
2.6
|
12.2
|
1.0
|
NE2
|
D:GLN200
|
2.7
|
13.2
|
1.0
|
NH2
|
D:ARG174
|
2.8
|
18.2
|
1.0
|
O3B
|
D:GDP361
|
2.9
|
29.6
|
1.0
|
N
|
D:GLU39
|
3.1
|
13.9
|
1.0
|
NH1
|
D:ARG174
|
3.5
|
11.4
|
1.0
|
F1
|
D:ALF363
|
3.5
|
14.0
|
1.0
|
CD
|
D:GLN200
|
3.6
|
16.6
|
1.0
|
CZ
|
D:ARG174
|
3.6
|
11.1
|
1.0
|
OE1
|
D:GLN200
|
3.6
|
11.1
|
1.0
|
CA
|
D:GLY38
|
3.6
|
20.3
|
1.0
|
C
|
D:GLY38
|
3.8
|
17.2
|
1.0
|
CG
|
D:GLU39
|
3.9
|
32.9
|
1.0
|
CA
|
D:GLU39
|
4.0
|
22.9
|
1.0
|
PB
|
D:GDP361
|
4.2
|
20.4
|
1.0
|
CG
|
D:LYS176
|
4.3
|
27.3
|
1.0
|
O2B
|
D:GDP361
|
4.6
|
15.1
|
1.0
|
CB
|
D:GLU39
|
4.6
|
16.3
|
1.0
|
CD
|
D:LYS176
|
4.7
|
11.2
|
1.0
|
N
|
D:GLY199
|
4.7
|
15.7
|
1.0
|
N
|
D:THR177
|
4.8
|
10.0
|
1.0
|
CA
|
D:LYS176
|
4.8
|
21.9
|
1.0
|
NE
|
D:ARG174
|
4.9
|
16.9
|
1.0
|
CB
|
D:LYS176
|
4.9
|
15.1
|
1.0
|
O3A
|
D:GDP361
|
4.9
|
15.2
|
1.0
|
N
|
D:GLY38
|
5.0
|
21.7
|
1.0
|
NZ
|
D:LYS42
|
5.0
|
17.9
|
1.0
|
O
|
D:GLY38
|
5.0
|
17.1
|
1.0
|
|
Fluorine binding site 7 out
of 8 in 1fqj
Go back to
Fluorine Binding Sites List in 1fqj
Fluorine binding site 7 out
of 8 in the Crystal Structure of the Heterotrimeric Complex of the Rgs Domain of RGS9, the Gamma Subunit of Phosphodiesterase and the Gt/I1 Chimera Alpha Subunit [(RGS9)-(Pdegamma)-(Gt/I1ALPHA)-(Gdp)-(ALF4-)-(MG2+)]
 Mono view
 Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 7 of Crystal Structure of the Heterotrimeric Complex of the Rgs Domain of RGS9, the Gamma Subunit of Phosphodiesterase and the Gt/I1 Chimera Alpha Subunit [(RGS9)-(Pdegamma)-(Gt/I1ALPHA)-(Gdp)-(ALF4-)-(MG2+)] within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:F363
b:20.8
occ:1.00
|
F3
|
D:ALF363
|
0.0
|
20.8
|
1.0
|
AL
|
D:ALF363
|
1.8
|
16.5
|
1.0
|
F2
|
D:ALF363
|
2.5
|
14.3
|
1.0
|
F1
|
D:ALF363
|
2.5
|
14.0
|
1.0
|
O
|
D:HOH364
|
2.6
|
12.2
|
1.0
|
O3B
|
D:GDP361
|
2.8
|
29.6
|
1.0
|
NZ
|
D:LYS42
|
2.8
|
17.9
|
1.0
|
N
|
D:GLY199
|
2.9
|
15.7
|
1.0
|
CA
|
D:GLY38
|
3.3
|
20.3
|
1.0
|
CA
|
D:GLY199
|
3.3
|
12.3
|
1.0
|
CE
|
D:LYS42
|
3.5
|
17.1
|
1.0
|
N
|
D:GLU39
|
3.5
|
13.9
|
1.0
|
F4
|
D:ALF363
|
3.5
|
18.8
|
1.0
|
PB
|
D:GDP361
|
3.7
|
20.4
|
1.0
|
O
|
D:ALA37
|
3.9
|
15.1
|
1.0
|
C
|
D:GLY198
|
3.9
|
12.8
|
1.0
|
C
|
D:GLY38
|
3.9
|
17.2
|
1.0
|
O2B
|
D:GDP361
|
4.0
|
15.1
|
1.0
|
OE1
|
D:GLN200
|
4.0
|
11.1
|
1.0
|
O1B
|
D:GDP361
|
4.0
|
15.2
|
1.0
|
NE2
|
D:GLN200
|
4.0
|
13.2
|
1.0
|
N
|
D:GLY38
|
4.1
|
21.7
|
1.0
|
C
|
D:GLY199
|
4.2
|
15.5
|
1.0
|
CA
|
D:GLY198
|
4.2
|
15.4
|
1.0
|
C
|
D:ALA37
|
4.3
|
18.5
|
1.0
|
CD
|
D:GLN200
|
4.3
|
16.6
|
1.0
|
N
|
D:GLN200
|
4.4
|
12.9
|
1.0
|
O
|
D:VAL197
|
4.6
|
28.8
|
1.0
|
MG
|
D:MG352
|
4.6
|
22.7
|
1.0
|
O
|
D:HOH366
|
4.6
|
15.5
|
1.0
|
CA
|
D:GLU39
|
4.7
|
22.9
|
1.0
|
O
|
D:GLY198
|
4.9
|
16.4
|
1.0
|
CD
|
D:LYS42
|
5.0
|
21.6
|
1.0
|
|
Fluorine binding site 8 out
of 8 in 1fqj
Go back to
Fluorine Binding Sites List in 1fqj
Fluorine binding site 8 out
of 8 in the Crystal Structure of the Heterotrimeric Complex of the Rgs Domain of RGS9, the Gamma Subunit of Phosphodiesterase and the Gt/I1 Chimera Alpha Subunit [(RGS9)-(Pdegamma)-(Gt/I1ALPHA)-(Gdp)-(ALF4-)-(MG2+)]
 Mono view
 Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 8 of Crystal Structure of the Heterotrimeric Complex of the Rgs Domain of RGS9, the Gamma Subunit of Phosphodiesterase and the Gt/I1 Chimera Alpha Subunit [(RGS9)-(Pdegamma)-(Gt/I1ALPHA)-(Gdp)-(ALF4-)-(MG2+)] within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:F363
b:18.8
occ:1.00
|
F4
|
D:ALF363
|
0.0
|
18.8
|
1.0
|
AL
|
D:ALF363
|
1.8
|
16.5
|
1.0
|
F1
|
D:ALF363
|
2.4
|
14.0
|
1.0
|
F2
|
D:ALF363
|
2.6
|
14.3
|
1.0
|
O
|
D:HOH365
|
2.7
|
8.4
|
1.0
|
O
|
D:HOH364
|
2.7
|
12.2
|
1.0
|
N
|
D:THR177
|
2.8
|
10.0
|
1.0
|
NH1
|
D:ARG174
|
2.8
|
11.4
|
1.0
|
MG
|
D:MG352
|
3.1
|
22.7
|
1.0
|
CA
|
D:LYS176
|
3.3
|
21.9
|
1.0
|
NH2
|
D:ARG174
|
3.3
|
18.2
|
1.0
|
CZ
|
D:ARG174
|
3.4
|
11.1
|
1.0
|
C
|
D:LYS176
|
3.5
|
15.2
|
1.0
|
F3
|
D:ALF363
|
3.5
|
20.8
|
1.0
|
O3B
|
D:GDP361
|
3.6
|
29.6
|
1.0
|
O2B
|
D:GDP361
|
3.6
|
15.1
|
1.0
|
O
|
D:VAL175
|
3.6
|
15.8
|
1.0
|
OG1
|
D:THR177
|
3.7
|
18.4
|
1.0
|
CA
|
D:THR177
|
3.8
|
15.2
|
1.0
|
CB
|
D:THR177
|
3.8
|
14.4
|
1.0
|
CG
|
D:LYS176
|
4.0
|
27.3
|
1.0
|
PB
|
D:GDP361
|
4.1
|
20.4
|
1.0
|
CB
|
D:LYS176
|
4.1
|
15.1
|
1.0
|
O2A
|
D:GDP361
|
4.1
|
14.5
|
1.0
|
N
|
D:LYS176
|
4.3
|
15.2
|
1.0
|
C
|
D:VAL175
|
4.3
|
21.5
|
1.0
|
O
|
D:THR177
|
4.4
|
13.2
|
1.0
|
O
|
D:HOH366
|
4.6
|
15.5
|
1.0
|
NE
|
D:ARG174
|
4.7
|
16.9
|
1.0
|
C
|
D:THR177
|
4.7
|
21.4
|
1.0
|
O3A
|
D:GDP361
|
4.7
|
15.2
|
1.0
|
O
|
D:LYS176
|
4.7
|
17.8
|
1.0
|
NE2
|
D:GLN200
|
4.9
|
13.2
|
1.0
|
OE1
|
D:GLN200
|
4.9
|
11.1
|
1.0
|
|
Reference:
K.C.Slep,
M.A.Kercher,
W.He,
C.W.Cowan,
T.G.Wensel,
P.B.Sigler.
Structural Determinants For Regulation of Phosphodiesterase By A G Protein at 2.0 A. Nature V. 409 1071 2001.
ISSN: ISSN 0028-0836
PubMed: 11234020
DOI: 10.1038/35059138
Page generated: Wed Jul 31 11:19:46 2024
|