Fluorine in PDB 1hwi: Complex of the Catalytic Portion of Human Hmg-Coa Reductase with Fluvastatin
Enzymatic activity of Complex of the Catalytic Portion of Human Hmg-Coa Reductase with Fluvastatin
All present enzymatic activity of Complex of the Catalytic Portion of Human Hmg-Coa Reductase with Fluvastatin:
1.1.1.34;
Protein crystallography data
The structure of Complex of the Catalytic Portion of Human Hmg-Coa Reductase with Fluvastatin, PDB code: 1hwi
was solved by
E.S.Istvan,
J.Deisenhofer,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
43.77 /
2.30
|
Space group
|
P 1 21 1
|
Cell size a, b, c (Å), α, β, γ (°)
|
74.765,
175.059,
74.838,
90.00,
118.25,
90.00
|
R / Rfree (%)
|
18.6 /
21.4
|
Fluorine Binding Sites:
The binding sites of Fluorine atom in the Complex of the Catalytic Portion of Human Hmg-Coa Reductase with Fluvastatin
(pdb code 1hwi). This binding sites where shown within
5.0 Angstroms radius around Fluorine atom.
In total 4 binding sites of Fluorine where determined in the
Complex of the Catalytic Portion of Human Hmg-Coa Reductase with Fluvastatin, PDB code: 1hwi:
Jump to Fluorine binding site number:
1;
2;
3;
4;
Fluorine binding site 1 out
of 4 in 1hwi
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Fluorine Binding Sites List in 1hwi
Fluorine binding site 1 out
of 4 in the Complex of the Catalytic Portion of Human Hmg-Coa Reductase with Fluvastatin
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 1 of Complex of the Catalytic Portion of Human Hmg-Coa Reductase with Fluvastatin within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F2
b:34.7
occ:1.00
|
F1
|
A:1152
|
0.0
|
34.7
|
1.0
|
C84
|
A:1152
|
1.4
|
32.0
|
1.0
|
C85
|
A:1152
|
2.4
|
31.5
|
1.0
|
C83
|
A:1152
|
2.4
|
29.7
|
1.0
|
CG1
|
A:VAL683
|
2.8
|
30.6
|
1.0
|
CG2
|
A:VAL683
|
3.1
|
22.9
|
1.0
|
NE
|
A:ARG590
|
3.2
|
26.7
|
1.0
|
CB
|
A:VAL683
|
3.4
|
24.8
|
1.0
|
CZ
|
A:ARG590
|
3.5
|
28.8
|
1.0
|
C86
|
A:1152
|
3.7
|
27.7
|
1.0
|
C82
|
A:1152
|
3.7
|
31.1
|
1.0
|
NH2
|
A:ARG590
|
3.7
|
27.6
|
1.0
|
C
|
A:VAL683
|
3.7
|
23.7
|
1.0
|
CD
|
A:ARG590
|
3.8
|
22.2
|
1.0
|
O
|
A:VAL683
|
3.9
|
22.7
|
1.0
|
OG
|
A:SER661
|
3.9
|
29.5
|
1.0
|
N
|
A:SER684
|
3.9
|
19.9
|
1.0
|
CB
|
A:SER684
|
3.9
|
21.4
|
1.0
|
C81
|
A:1152
|
4.2
|
28.3
|
1.0
|
CA
|
A:VAL683
|
4.2
|
22.5
|
1.0
|
NH1
|
A:ARG590
|
4.3
|
26.4
|
1.0
|
CB
|
A:SER661
|
4.4
|
23.1
|
1.0
|
CA
|
A:SER684
|
4.4
|
16.9
|
1.0
|
CG
|
A:ARG590
|
4.5
|
20.8
|
1.0
|
CD2
|
B:LEU857
|
4.6
|
24.5
|
1.0
|
|
Fluorine binding site 2 out
of 4 in 1hwi
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Fluorine Binding Sites List in 1hwi
Fluorine binding site 2 out
of 4 in the Complex of the Catalytic Portion of Human Hmg-Coa Reductase with Fluvastatin
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 2 of Complex of the Catalytic Portion of Human Hmg-Coa Reductase with Fluvastatin within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:F1
b:43.6
occ:1.00
|
F1
|
B:1151
|
0.0
|
43.6
|
1.0
|
C84
|
B:1151
|
1.4
|
36.5
|
1.0
|
C83
|
B:1151
|
2.4
|
34.7
|
1.0
|
C85
|
B:1151
|
2.4
|
34.2
|
1.0
|
CG1
|
B:VAL683
|
2.8
|
22.7
|
1.0
|
CG2
|
B:VAL683
|
3.0
|
20.2
|
1.0
|
NH1
|
B:ARG590
|
3.4
|
26.3
|
1.0
|
CB
|
B:VAL683
|
3.5
|
17.9
|
1.0
|
C86
|
B:1151
|
3.7
|
32.3
|
1.0
|
C82
|
B:1151
|
3.7
|
33.0
|
1.0
|
CD
|
B:ARG590
|
3.7
|
25.0
|
1.0
|
OG
|
B:SER661
|
3.7
|
18.7
|
1.0
|
CB
|
B:SER661
|
4.0
|
16.0
|
1.0
|
CZ
|
B:ARG590
|
4.0
|
26.8
|
1.0
|
NE
|
B:ARG590
|
4.1
|
29.6
|
1.0
|
C
|
B:VAL683
|
4.2
|
18.1
|
1.0
|
C81
|
B:1151
|
4.2
|
27.2
|
1.0
|
O
|
B:VAL683
|
4.3
|
19.5
|
1.0
|
N
|
B:SER684
|
4.4
|
17.8
|
1.0
|
CA
|
B:VAL683
|
4.4
|
17.4
|
1.0
|
CB
|
B:SER684
|
4.5
|
19.9
|
1.0
|
CG
|
B:ARG590
|
4.7
|
20.9
|
1.0
|
CD2
|
A:LEU857
|
4.9
|
16.4
|
1.0
|
CA
|
B:SER661
|
4.9
|
19.6
|
1.0
|
CA
|
B:SER684
|
4.9
|
16.7
|
1.0
|
NH2
|
B:ARG590
|
5.0
|
19.3
|
1.0
|
CG
|
A:LEU862
|
5.0
|
41.4
|
1.0
|
|
Fluorine binding site 3 out
of 4 in 1hwi
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Fluorine Binding Sites List in 1hwi
Fluorine binding site 3 out
of 4 in the Complex of the Catalytic Portion of Human Hmg-Coa Reductase with Fluvastatin
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 3 of Complex of the Catalytic Portion of Human Hmg-Coa Reductase with Fluvastatin within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:F4
b:43.6
occ:1.00
|
F1
|
C:1154
|
0.0
|
43.6
|
1.0
|
C84
|
C:1154
|
1.4
|
35.1
|
1.0
|
C85
|
C:1154
|
2.4
|
33.5
|
1.0
|
C83
|
C:1154
|
2.4
|
34.2
|
1.0
|
CG1
|
C:VAL683
|
3.0
|
21.6
|
1.0
|
NE
|
C:ARG590
|
3.2
|
28.3
|
1.0
|
CB
|
C:VAL683
|
3.4
|
20.4
|
1.0
|
CZ
|
C:ARG590
|
3.6
|
28.4
|
1.0
|
C86
|
C:1154
|
3.6
|
31.1
|
1.0
|
C82
|
C:1154
|
3.7
|
31.6
|
1.0
|
NH2
|
C:ARG590
|
3.8
|
27.9
|
1.0
|
C
|
C:VAL683
|
3.8
|
21.0
|
1.0
|
CD
|
C:ARG590
|
3.8
|
23.6
|
1.0
|
O
|
C:VAL683
|
3.9
|
19.8
|
1.0
|
N
|
C:SER684
|
3.9
|
20.9
|
1.0
|
CB
|
C:SER684
|
3.9
|
19.1
|
1.0
|
OG
|
C:SER661
|
4.0
|
25.6
|
1.0
|
C81
|
C:1154
|
4.1
|
28.4
|
1.0
|
CA
|
C:VAL683
|
4.2
|
19.9
|
1.0
|
CA
|
C:SER684
|
4.4
|
19.1
|
1.0
|
NH1
|
C:ARG590
|
4.4
|
24.5
|
1.0
|
CB
|
C:SER661
|
4.4
|
22.0
|
1.0
|
CG
|
C:ARG590
|
4.5
|
20.3
|
1.0
|
CD2
|
D:LEU857
|
4.6
|
20.1
|
1.0
|
CG2
|
C:VAL683
|
4.7
|
23.9
|
1.0
|
|
Fluorine binding site 4 out
of 4 in 1hwi
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Fluorine Binding Sites List in 1hwi
Fluorine binding site 4 out
of 4 in the Complex of the Catalytic Portion of Human Hmg-Coa Reductase with Fluvastatin
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 4 of Complex of the Catalytic Portion of Human Hmg-Coa Reductase with Fluvastatin within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:F3
b:37.9
occ:1.00
|
F1
|
D:1153
|
0.0
|
37.9
|
1.0
|
C84
|
D:1153
|
1.4
|
34.1
|
1.0
|
C85
|
D:1153
|
2.4
|
31.4
|
1.0
|
C83
|
D:1153
|
2.4
|
33.3
|
1.0
|
CG1
|
D:VAL683
|
3.0
|
26.8
|
1.0
|
NE
|
D:ARG590
|
3.3
|
26.1
|
1.0
|
CB
|
D:VAL683
|
3.4
|
24.2
|
1.0
|
C86
|
D:1153
|
3.6
|
28.4
|
1.0
|
CZ
|
D:ARG590
|
3.7
|
28.2
|
1.0
|
C82
|
D:1153
|
3.7
|
29.4
|
1.0
|
C
|
D:VAL683
|
3.8
|
22.6
|
1.0
|
NH2
|
D:ARG590
|
3.8
|
26.9
|
1.0
|
CD
|
D:ARG590
|
3.8
|
25.3
|
1.0
|
N
|
D:SER684
|
3.9
|
18.9
|
1.0
|
O
|
D:VAL683
|
3.9
|
20.6
|
1.0
|
CB
|
D:SER684
|
3.9
|
18.6
|
1.0
|
OG
|
D:SER661
|
4.0
|
22.3
|
1.0
|
CA
|
D:VAL683
|
4.2
|
22.4
|
1.0
|
C81
|
D:1153
|
4.2
|
25.9
|
1.0
|
CB
|
D:SER661
|
4.4
|
18.6
|
1.0
|
CA
|
D:SER684
|
4.4
|
18.5
|
1.0
|
NH1
|
D:ARG590
|
4.4
|
28.5
|
1.0
|
CG
|
D:ARG590
|
4.5
|
19.8
|
1.0
|
CD2
|
C:LEU857
|
4.5
|
19.4
|
1.0
|
CG2
|
D:VAL683
|
4.7
|
29.4
|
1.0
|
|
Reference:
E.S.Istvan,
J.Deisenhofer.
Structural Mechanism For Statin Inhibition of Hmg-Coa Reductase. Science V. 292 1160 2001.
ISSN: ISSN 0036-8075
PubMed: 11349148
DOI: 10.1126/SCIENCE.1059344
Page generated: Wed Jul 31 11:32:46 2024
|