Fluorine in PDB 1hwl: Complex of the Catalytic Portion of Human Hmg-Coa Reductase with Rosuvastatin (Formally Known As ZD4522)
Enzymatic activity of Complex of the Catalytic Portion of Human Hmg-Coa Reductase with Rosuvastatin (Formally Known As ZD4522)
All present enzymatic activity of Complex of the Catalytic Portion of Human Hmg-Coa Reductase with Rosuvastatin (Formally Known As ZD4522):
1.1.1.34;
Protein crystallography data
The structure of Complex of the Catalytic Portion of Human Hmg-Coa Reductase with Rosuvastatin (Formally Known As ZD4522), PDB code: 1hwl
was solved by
E.S.Istvan,
J.Deisenhofer,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
43.29 /
2.10
|
Space group
|
P 1 21 1
|
Cell size a, b, c (Å), α, β, γ (°)
|
74.432,
172.512,
79.987,
90.00,
117.36,
90.00
|
R / Rfree (%)
|
21.9 /
23.9
|
Fluorine Binding Sites:
The binding sites of Fluorine atom in the Complex of the Catalytic Portion of Human Hmg-Coa Reductase with Rosuvastatin (Formally Known As ZD4522)
(pdb code 1hwl). This binding sites where shown within
5.0 Angstroms radius around Fluorine atom.
In total 4 binding sites of Fluorine where determined in the
Complex of the Catalytic Portion of Human Hmg-Coa Reductase with Rosuvastatin (Formally Known As ZD4522), PDB code: 1hwl:
Jump to Fluorine binding site number:
1;
2;
3;
4;
Fluorine binding site 1 out
of 4 in 1hwl
Go back to
Fluorine Binding Sites List in 1hwl
Fluorine binding site 1 out
of 4 in the Complex of the Catalytic Portion of Human Hmg-Coa Reductase with Rosuvastatin (Formally Known As ZD4522)
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 1 of Complex of the Catalytic Portion of Human Hmg-Coa Reductase with Rosuvastatin (Formally Known As ZD4522) within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F2
b:52.6
occ:1.00
|
F1
|
A:FBI2
|
0.0
|
52.6
|
1.0
|
C84
|
A:FBI2
|
1.4
|
51.4
|
1.0
|
C85
|
A:FBI2
|
2.4
|
50.9
|
1.0
|
C83
|
A:FBI2
|
2.4
|
50.7
|
1.0
|
NE
|
A:ARG590
|
2.9
|
43.5
|
1.0
|
CZ
|
A:ARG590
|
3.1
|
44.4
|
1.0
|
NH2
|
A:ARG590
|
3.4
|
44.9
|
1.0
|
CG1
|
A:VAL683
|
3.4
|
45.1
|
1.0
|
CD
|
A:ARG590
|
3.5
|
43.0
|
1.0
|
CB
|
A:SER684
|
3.5
|
40.5
|
1.0
|
C86
|
A:FBI2
|
3.7
|
49.7
|
1.0
|
C82
|
A:FBI2
|
3.7
|
50.1
|
1.0
|
NH1
|
A:ARG590
|
3.7
|
44.5
|
1.0
|
C
|
A:VAL683
|
3.7
|
43.5
|
1.0
|
CB
|
A:VAL683
|
3.7
|
45.3
|
1.0
|
N
|
A:SER684
|
3.8
|
42.2
|
1.0
|
O
|
A:VAL683
|
3.8
|
43.4
|
1.0
|
OG
|
A:SER661
|
4.1
|
53.2
|
1.0
|
CA
|
A:SER684
|
4.1
|
40.1
|
1.0
|
C81
|
A:FBI2
|
4.2
|
50.0
|
1.0
|
CG
|
A:ARG590
|
4.3
|
42.1
|
1.0
|
CA
|
A:VAL683
|
4.3
|
44.4
|
1.0
|
CD2
|
B:LEU857
|
4.6
|
49.1
|
1.0
|
OG
|
A:SER684
|
4.7
|
39.9
|
1.0
|
CB
|
A:SER661
|
4.9
|
52.6
|
1.0
|
|
Fluorine binding site 2 out
of 4 in 1hwl
Go back to
Fluorine Binding Sites List in 1hwl
Fluorine binding site 2 out
of 4 in the Complex of the Catalytic Portion of Human Hmg-Coa Reductase with Rosuvastatin (Formally Known As ZD4522)
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 2 of Complex of the Catalytic Portion of Human Hmg-Coa Reductase with Rosuvastatin (Formally Known As ZD4522) within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:F1
b:54.8
occ:1.00
|
F1
|
B:FBI1
|
0.0
|
54.8
|
1.0
|
C84
|
B:FBI1
|
1.3
|
54.9
|
1.0
|
C85
|
B:FBI1
|
2.4
|
55.1
|
1.0
|
C83
|
B:FBI1
|
2.4
|
55.3
|
1.0
|
NE
|
B:ARG590
|
3.0
|
49.1
|
1.0
|
CZ
|
B:ARG590
|
3.2
|
49.5
|
1.0
|
CG1
|
B:VAL683
|
3.4
|
47.5
|
1.0
|
NH2
|
B:ARG590
|
3.4
|
50.1
|
1.0
|
CD
|
B:ARG590
|
3.5
|
48.1
|
1.0
|
CB
|
B:SER684
|
3.5
|
46.5
|
1.0
|
C86
|
B:FBI1
|
3.6
|
54.7
|
1.0
|
C82
|
B:FBI1
|
3.7
|
54.6
|
1.0
|
CB
|
B:VAL683
|
3.7
|
48.1
|
1.0
|
C
|
B:VAL683
|
3.7
|
47.0
|
1.0
|
NH1
|
B:ARG590
|
3.8
|
48.8
|
1.0
|
N
|
B:SER684
|
3.8
|
46.7
|
1.0
|
O
|
B:VAL683
|
3.8
|
46.6
|
1.0
|
OG
|
B:SER661
|
4.1
|
57.0
|
1.0
|
CA
|
B:SER684
|
4.1
|
45.8
|
1.0
|
C81
|
B:FBI1
|
4.2
|
54.8
|
1.0
|
CA
|
B:VAL683
|
4.3
|
47.6
|
1.0
|
CG
|
B:ARG590
|
4.3
|
47.4
|
1.0
|
OG
|
B:SER684
|
4.7
|
48.4
|
1.0
|
CD2
|
A:LEU857
|
4.7
|
56.0
|
1.0
|
CB
|
B:SER661
|
4.9
|
56.4
|
1.0
|
|
Fluorine binding site 3 out
of 4 in 1hwl
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Fluorine Binding Sites List in 1hwl
Fluorine binding site 3 out
of 4 in the Complex of the Catalytic Portion of Human Hmg-Coa Reductase with Rosuvastatin (Formally Known As ZD4522)
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 3 of Complex of the Catalytic Portion of Human Hmg-Coa Reductase with Rosuvastatin (Formally Known As ZD4522) within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:F4
b:53.7
occ:1.00
|
F1
|
C:FBI4
|
0.0
|
53.7
|
1.0
|
C84
|
C:FBI4
|
1.4
|
52.9
|
1.0
|
C85
|
C:FBI4
|
2.4
|
52.5
|
1.0
|
C83
|
C:FBI4
|
2.4
|
52.9
|
1.0
|
NE
|
C:ARG590
|
3.0
|
47.2
|
1.0
|
CZ
|
C:ARG590
|
3.1
|
48.3
|
1.0
|
CB
|
C:SER684
|
3.4
|
44.5
|
1.0
|
NH2
|
C:ARG590
|
3.5
|
48.5
|
1.0
|
CG1
|
C:VAL683
|
3.5
|
46.4
|
1.0
|
CD
|
C:ARG590
|
3.5
|
46.5
|
1.0
|
C86
|
C:FBI4
|
3.6
|
52.2
|
1.0
|
C
|
C:VAL683
|
3.6
|
45.2
|
1.0
|
N
|
C:SER684
|
3.7
|
44.4
|
1.0
|
C82
|
C:FBI4
|
3.7
|
52.7
|
1.0
|
CB
|
C:VAL683
|
3.7
|
46.5
|
1.0
|
NH1
|
C:ARG590
|
3.7
|
48.1
|
1.0
|
O
|
C:VAL683
|
3.8
|
44.8
|
1.0
|
CA
|
C:SER684
|
4.0
|
43.7
|
1.0
|
C81
|
C:FBI4
|
4.2
|
52.1
|
1.0
|
OG
|
C:SER661
|
4.2
|
57.5
|
1.0
|
CA
|
C:VAL683
|
4.3
|
46.1
|
1.0
|
CG
|
C:ARG590
|
4.3
|
46.1
|
1.0
|
CD2
|
D:LEU857
|
4.5
|
48.3
|
1.0
|
OG
|
C:SER684
|
4.6
|
45.3
|
1.0
|
CB
|
C:SER661
|
5.0
|
57.3
|
1.0
|
|
Fluorine binding site 4 out
of 4 in 1hwl
Go back to
Fluorine Binding Sites List in 1hwl
Fluorine binding site 4 out
of 4 in the Complex of the Catalytic Portion of Human Hmg-Coa Reductase with Rosuvastatin (Formally Known As ZD4522)
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 4 of Complex of the Catalytic Portion of Human Hmg-Coa Reductase with Rosuvastatin (Formally Known As ZD4522) within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:F3
b:53.4
occ:1.00
|
F1
|
D:FBI3
|
0.0
|
53.4
|
1.0
|
C84
|
D:FBI3
|
1.4
|
52.4
|
1.0
|
C85
|
D:FBI3
|
2.4
|
52.3
|
1.0
|
C83
|
D:FBI3
|
2.4
|
52.5
|
1.0
|
NE
|
D:ARG590
|
2.9
|
42.9
|
1.0
|
CZ
|
D:ARG590
|
3.1
|
43.8
|
1.0
|
NH2
|
D:ARG590
|
3.4
|
44.5
|
1.0
|
CG1
|
D:VAL683
|
3.4
|
47.5
|
1.0
|
CD
|
D:ARG590
|
3.4
|
42.4
|
1.0
|
CB
|
D:SER684
|
3.5
|
43.7
|
1.0
|
C86
|
D:FBI3
|
3.6
|
51.8
|
1.0
|
C
|
D:VAL683
|
3.6
|
45.5
|
1.0
|
C82
|
D:FBI3
|
3.7
|
51.8
|
1.0
|
N
|
D:SER684
|
3.7
|
44.1
|
1.0
|
NH1
|
D:ARG590
|
3.7
|
43.8
|
1.0
|
CB
|
D:VAL683
|
3.7
|
46.7
|
1.0
|
O
|
D:VAL683
|
3.8
|
45.7
|
1.0
|
CA
|
D:SER684
|
4.0
|
42.6
|
1.0
|
OG
|
D:SER661
|
4.1
|
54.6
|
1.0
|
C81
|
D:FBI3
|
4.2
|
51.9
|
1.0
|
CG
|
D:ARG590
|
4.2
|
40.8
|
1.0
|
CA
|
D:VAL683
|
4.3
|
46.5
|
1.0
|
CD2
|
C:LEU857
|
4.6
|
50.4
|
1.0
|
OG
|
D:SER684
|
4.6
|
43.8
|
1.0
|
CB
|
D:SER661
|
4.9
|
53.4
|
1.0
|
|
Reference:
E.S.Istvan,
J.Deisenhofer.
Structural Mechanism For Statin Inhibition of Hmg-Coa Reductase. Science V. 292 1160 2001.
ISSN: ISSN 0036-8075
PubMed: 11349148
DOI: 10.1126/SCIENCE.1059344
Page generated: Wed Jul 31 11:34:11 2024
|