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Fluorine in PDB 1krx: Solution Structure of Beryllofluoride-Activated Ntrc Receiver Domain: Model Structures Incorporating Active Site Contacts

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Solution Structure of Beryllofluoride-Activated Ntrc Receiver Domain: Model Structures Incorporating Active Site Contacts (pdb code 1krx). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total 3 binding sites of Fluorine where determined in the Solution Structure of Beryllofluoride-Activated Ntrc Receiver Domain: Model Structures Incorporating Active Site Contacts, PDB code: 1krx:
Jump to Fluorine binding site number: 1; 2; 3;

Fluorine binding site 1 out of 3 in 1krx

Go back to Fluorine Binding Sites List in 1krx
Fluorine binding site 1 out of 3 in the Solution Structure of Beryllofluoride-Activated Ntrc Receiver Domain: Model Structures Incorporating Active Site Contacts


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Solution Structure of Beryllofluoride-Activated Ntrc Receiver Domain: Model Structures Incorporating Active Site Contacts within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F125

b:0.0
occ:1.00
F1 A:BEF125 0.0 0.0 1.0
BE A:BEF125 1.5 0.0 1.0
HZ2 A:LYS104 2.1 0.0 1.0
HZ1 A:LYS104 2.2 0.0 1.0
F2 A:BEF125 2.4 0.0 1.0
F3 A:BEF125 2.4 0.0 1.0
OD1 A:ASP54 2.5 0.0 1.0
NZ A:LYS104 2.5 0.0 1.0
HZ3 A:LYS104 3.0 0.0 1.0
OD1 A:ASP10 3.0 0.0 1.0
OD2 A:ASP54 3.2 0.0 1.0
CG A:ASP54 3.2 0.0 1.0
HG3 A:MET81 3.4 0.0 1.0
HD3 A:LYS104 3.6 0.0 1.0
OD2 A:ASP10 3.7 0.0 1.0
CG A:ASP10 3.7 0.0 1.0
CE A:LYS104 3.8 0.0 1.0
H A:ILE55 3.8 0.0 1.0
HB3 A:ARG56 4.1 0.0 1.0
CD A:LYS104 4.1 0.0 1.0
HB2 A:ARG56 4.1 0.0 1.0
HD2 A:LYS104 4.2 0.0 1.0
HG1 A:THR82 4.2 0.0 1.0
CG A:MET81 4.4 0.0 1.0
HE2 A:LYS104 4.5 0.0 1.0
HE3 A:LYS104 4.5 0.0 1.0
HB2 A:MET81 4.6 0.0 1.0
HG2 A:MET81 4.6 0.0 1.0
CB A:ARG56 4.6 0.0 1.0
HD3 A:ARG56 4.7 0.0 1.0
CB A:ASP54 4.7 0.0 1.0
H A:ASP11 4.7 0.0 1.0
HG22 A:ILE55 4.8 0.0 1.0
HA A:ASP54 4.8 0.0 1.0
N A:ILE55 4.8 0.0 1.0
HB2 A:ASP11 4.9 0.0 1.0
HA A:ASP10 5.0 0.0 1.0

Fluorine binding site 2 out of 3 in 1krx

Go back to Fluorine Binding Sites List in 1krx
Fluorine binding site 2 out of 3 in the Solution Structure of Beryllofluoride-Activated Ntrc Receiver Domain: Model Structures Incorporating Active Site Contacts


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 2 of Solution Structure of Beryllofluoride-Activated Ntrc Receiver Domain: Model Structures Incorporating Active Site Contacts within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F125

b:0.0
occ:1.00
F2 A:BEF125 0.0 0.0 1.0
BE A:BEF125 1.5 0.0 1.0
HG1 A:THR82 2.1 0.0 1.0
HZ2 A:LYS104 2.2 0.0 1.0
F3 A:BEF125 2.4 0.0 1.0
F1 A:BEF125 2.4 0.0 1.0
HG3 A:MET81 2.5 0.0 1.0
OD1 A:ASP54 2.5 0.0 1.0
HG22 A:ILE55 2.6 0.0 1.0
H A:ILE55 2.8 0.0 1.0
HG2 A:MET81 2.9 0.0 1.0
HG23 A:ILE55 2.9 0.0 1.0
OG1 A:THR82 3.0 0.0 1.0
HB2 A:MET81 3.0 0.0 1.0
CG A:MET81 3.0 0.0 1.0
NZ A:LYS104 3.2 0.0 1.0
CG2 A:ILE55 3.3 0.0 1.0
HD2 A:LYS104 3.4 0.0 1.0
CB A:MET81 3.5 0.0 1.0
HZ1 A:LYS104 3.6 0.0 1.0
N A:ILE55 3.6 0.0 1.0
CG A:ASP54 3.6 0.0 1.0
HZ3 A:LYS104 3.8 0.0 1.0
HB A:THR82 3.8 0.0 1.0
HD3 A:LYS104 3.9 0.0 1.0
HA A:ASP54 3.9 0.0 1.0
HB2 A:ARG56 3.9 0.0 1.0
CD A:LYS104 3.9 0.0 1.0
HG21 A:ILE55 3.9 0.0 1.0
O A:ILE55 3.9 0.0 1.0
CB A:THR82 4.0 0.0 1.0
CE A:LYS104 4.0 0.0 1.0
C A:ILE55 4.1 0.0 1.0
HE3 A:LYS104 4.2 0.0 1.0
CA A:ILE55 4.2 0.0 1.0
N A:THR82 4.2 0.0 1.0
OD2 A:ASP54 4.3 0.0 1.0
H A:THR82 4.3 0.0 1.0
C A:MET81 4.3 0.0 1.0
CB A:ILE55 4.4 0.0 1.0
HB3 A:MET81 4.4 0.0 1.0
CA A:MET81 4.4 0.0 1.0
H A:MET81 4.4 0.0 1.0
C A:ASP54 4.4 0.0 1.0
OD2 A:ASP10 4.5 0.0 1.0
CA A:ASP54 4.5 0.0 1.0
HA A:LYS104 4.6 0.0 1.0
OD1 A:ASP10 4.6 0.0 1.0
CB A:ASP54 4.7 0.0 1.0
SD A:MET81 4.7 0.0 1.0
O A:MET81 4.7 0.0 1.0
HB3 A:ARG56 4.7 0.0 1.0
HE1 A:MET81 4.8 0.0 1.0
CA A:THR82 4.8 0.0 1.0
CB A:ARG56 4.8 0.0 1.0
N A:MET81 4.9 0.0 1.0
CG A:ASP10 4.9 0.0 1.0
N A:ARG56 4.9 0.0 1.0
HG22 A:ILE80 4.9 0.0 1.0
HB A:ILE55 5.0 0.0 1.0
HE2 A:LYS104 5.0 0.0 1.0

Fluorine binding site 3 out of 3 in 1krx

Go back to Fluorine Binding Sites List in 1krx
Fluorine binding site 3 out of 3 in the Solution Structure of Beryllofluoride-Activated Ntrc Receiver Domain: Model Structures Incorporating Active Site Contacts


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 3 of Solution Structure of Beryllofluoride-Activated Ntrc Receiver Domain: Model Structures Incorporating Active Site Contacts within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F125

b:0.0
occ:1.00
F3 A:BEF125 0.0 0.0 1.0
BE A:BEF125 1.5 0.0 1.0
H A:ILE55 2.2 0.0 1.0
HB2 A:ARG56 2.2 0.0 1.0
F2 A:BEF125 2.4 0.0 1.0
F1 A:BEF125 2.4 0.0 1.0
HB3 A:ARG56 2.5 0.0 1.0
OD1 A:ASP54 2.5 0.0 1.0
CB A:ARG56 2.7 0.0 1.0
CG A:ASP54 2.8 0.0 1.0
OD2 A:ASP54 2.8 0.0 1.0
C A:ILE55 2.9 0.0 1.0
N A:ILE55 3.0 0.0 1.0
N A:ARG56 3.0 0.0 1.0
O A:ILE55 3.1 0.0 1.0
HG22 A:ILE55 3.3 0.0 1.0
CA A:ARG56 3.5 0.0 1.0
H A:ARG56 3.5 0.0 1.0
CA A:ILE55 3.5 0.0 1.0
HD22 A:ASN35 3.8 0.0 1.0
HZ2 A:LYS104 3.9 0.0 1.0
HG1 A:THR82 3.9 0.0 1.0
HD3 A:ARG56 4.0 0.0 1.0
CB A:ASP54 4.0 0.0 1.0
HG23 A:ILE55 4.0 0.0 1.0
CG A:ARG56 4.1 0.0 1.0
CG2 A:ILE55 4.1 0.0 1.0
C A:ASP54 4.2 0.0 1.0
HG3 A:MET81 4.2 0.0 1.0
HB3 A:ASP54 4.2 0.0 1.0
HG3 A:ARG56 4.2 0.0 1.0
HA A:ARG56 4.3 0.0 1.0
HA A:ILE55 4.3 0.0 1.0
C A:ARG56 4.3 0.0 1.0
HA A:ASP54 4.4 0.0 1.0
OD1 A:ASP10 4.4 0.0 1.0
CB A:ILE55 4.4 0.0 1.0
CA A:ASP54 4.4 0.0 1.0
HG2 A:MET81 4.5 0.0 1.0
O A:ARG56 4.5 0.0 1.0
HZ1 A:LYS104 4.5 0.0 1.0
CD A:ARG56 4.6 0.0 1.0
NZ A:LYS104 4.7 0.0 1.0
ND2 A:ASN35 4.7 0.0 1.0
CG A:MET81 4.9 0.0 1.0
HG2 A:ARG56 4.9 0.0 1.0
HB2 A:ASP54 4.9 0.0 1.0
OG1 A:THR82 4.9 0.0 1.0
HB A:THR82 5.0 0.0 1.0

Reference:

C.A.Hastings, S.-Y.Lee, H.S.Cho, D.Yan, S.Kustu, D.E.Wemmer. High-Resolution Solution Structure of the Beryllofluoride-Activated Ntrc Receiver Domain Biochemistry V. 42 9081 2003.
ISSN: ISSN 0006-2960
PubMed: 12885241
DOI: 10.1021/BI0273866
Page generated: Sun Dec 13 11:30:47 2020

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