Fluorine in PDB 1svt: Crystal Structure of GROEL14-GROES7-(Adp-Alfx)7
Protein crystallography data
The structure of Crystal Structure of GROEL14-GROES7-(Adp-Alfx)7, PDB code: 1svt
was solved by
C.Chaudhry,
A.L.Horwich,
A.T.Brunger,
P.D.Adams,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
49.39 /
2.81
|
Space group
|
P 21 21 2
|
Cell size a, b, c (Å), α, β, γ (°)
|
255.546,
266.855,
187.049,
90.00,
90.00,
90.00
|
R / Rfree (%)
|
24.7 /
27.4
|
Other elements in 1svt:
The structure of Crystal Structure of GROEL14-GROES7-(Adp-Alfx)7 also contains other interesting chemical elements:
Fluorine Binding Sites:
Pages:
>>> Page 1 <<<
Page 2, Binding sites: 11 -
20;
Page 3, Binding sites: 21 -
21;
Binding sites:
The binding sites of Fluorine atom in the Crystal Structure of GROEL14-GROES7-(Adp-Alfx)7
(pdb code 1svt). This binding sites where shown within
5.0 Angstroms radius around Fluorine atom.
In total 21 binding sites of Fluorine where determined in the
Crystal Structure of GROEL14-GROES7-(Adp-Alfx)7, PDB code: 1svt:
Jump to Fluorine binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Fluorine binding site 1 out
of 21 in 1svt
Go back to
Fluorine Binding Sites List in 1svt
Fluorine binding site 1 out
of 21 in the Crystal Structure of GROEL14-GROES7-(Adp-Alfx)7
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 1 of Crystal Structure of GROEL14-GROES7-(Adp-Alfx)7 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F602
b:2.8
occ:1.00
|
F1
|
A:AF3602
|
0.0
|
2.8
|
1.0
|
MG
|
A:MG601
|
1.8
|
2.0
|
1.0
|
AL
|
A:AF3602
|
1.9
|
7.2
|
1.0
|
O2A
|
A:ADP600
|
2.1
|
2.0
|
1.0
|
O1B
|
A:ADP600
|
2.5
|
2.0
|
1.0
|
OD1
|
A:ASP87
|
2.9
|
2.0
|
1.0
|
F2
|
A:AF3602
|
3.0
|
10.1
|
1.0
|
PB
|
A:ADP600
|
3.2
|
2.0
|
1.0
|
PA
|
A:ADP600
|
3.2
|
2.2
|
1.0
|
F3
|
A:AF3602
|
3.4
|
2.0
|
1.0
|
O3B
|
A:ADP600
|
3.4
|
3.6
|
1.0
|
O3A
|
A:ADP600
|
3.5
|
2.6
|
1.0
|
CG
|
A:ASP87
|
4.0
|
2.4
|
1.0
|
O1A
|
A:ADP600
|
4.0
|
2.0
|
1.0
|
K
|
A:K603
|
4.1
|
16.4
|
1.0
|
OD2
|
A:ASP398
|
4.3
|
8.1
|
1.0
|
OD2
|
A:ASP87
|
4.3
|
4.2
|
1.0
|
O
|
A:SER151
|
4.5
|
2.6
|
1.0
|
O5'
|
A:ADP600
|
4.6
|
2.0
|
1.0
|
O2B
|
A:ADP600
|
4.7
|
2.0
|
1.0
|
C5'
|
A:ADP600
|
4.8
|
2.4
|
1.0
|
O
|
A:HOH615
|
4.9
|
25.2
|
1.0
|
|
Fluorine binding site 2 out
of 21 in 1svt
Go back to
Fluorine Binding Sites List in 1svt
Fluorine binding site 2 out
of 21 in the Crystal Structure of GROEL14-GROES7-(Adp-Alfx)7
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 2 of Crystal Structure of GROEL14-GROES7-(Adp-Alfx)7 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F602
b:10.1
occ:1.00
|
F2
|
A:AF3602
|
0.0
|
10.1
|
1.0
|
AL
|
A:AF3602
|
1.8
|
7.2
|
1.0
|
O3B
|
A:ADP600
|
2.0
|
3.6
|
1.0
|
N
|
A:GLY88
|
2.4
|
2.0
|
1.0
|
O1B
|
A:ADP600
|
2.4
|
2.0
|
1.0
|
OD1
|
A:ASP87
|
2.5
|
2.0
|
1.0
|
PB
|
A:ADP600
|
2.6
|
2.0
|
1.0
|
F3
|
A:AF3602
|
2.9
|
2.0
|
1.0
|
F1
|
A:AF3602
|
3.0
|
2.8
|
1.0
|
C
|
A:ASP87
|
3.1
|
2.0
|
1.0
|
N
|
A:THR89
|
3.1
|
2.1
|
1.0
|
CA
|
A:GLY88
|
3.2
|
2.1
|
1.0
|
MG
|
A:MG601
|
3.2
|
2.0
|
1.0
|
OG1
|
A:THR89
|
3.2
|
2.6
|
1.0
|
CA
|
A:ASP87
|
3.3
|
2.0
|
1.0
|
O2B
|
A:ADP600
|
3.3
|
2.0
|
1.0
|
CG
|
A:ASP87
|
3.4
|
2.4
|
1.0
|
C
|
A:GLY88
|
3.5
|
2.4
|
1.0
|
O
|
A:HOH615
|
3.6
|
25.2
|
1.0
|
CB
|
A:ASP87
|
3.9
|
2.4
|
1.0
|
O3A
|
A:ADP600
|
3.9
|
2.6
|
1.0
|
O2A
|
A:ADP600
|
4.1
|
2.0
|
1.0
|
N
|
A:THR90
|
4.1
|
2.1
|
1.0
|
O
|
A:ASP87
|
4.2
|
2.0
|
1.0
|
CA
|
A:THR89
|
4.3
|
2.0
|
1.0
|
CB
|
A:THR89
|
4.3
|
2.0
|
1.0
|
OD2
|
A:ASP87
|
4.4
|
4.2
|
1.0
|
OD2
|
A:ASP398
|
4.5
|
8.1
|
1.0
|
O
|
A:GLY88
|
4.6
|
2.5
|
1.0
|
N
|
A:ASP87
|
4.7
|
2.0
|
1.0
|
C
|
A:THR89
|
4.7
|
2.0
|
1.0
|
PA
|
A:ADP600
|
4.8
|
2.2
|
1.0
|
CG2
|
A:THR89
|
4.8
|
2.1
|
1.0
|
OG1
|
A:THR90
|
4.9
|
2.0
|
1.0
|
|
Fluorine binding site 3 out
of 21 in 1svt
Go back to
Fluorine Binding Sites List in 1svt
Fluorine binding site 3 out
of 21 in the Crystal Structure of GROEL14-GROES7-(Adp-Alfx)7
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 3 of Crystal Structure of GROEL14-GROES7-(Adp-Alfx)7 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F602
b:2.0
occ:1.00
|
F3
|
A:AF3602
|
0.0
|
2.0
|
1.0
|
AL
|
A:AF3602
|
1.8
|
7.2
|
1.0
|
OG1
|
A:THR89
|
2.7
|
2.6
|
1.0
|
O3B
|
A:ADP600
|
2.8
|
3.6
|
1.0
|
N
|
A:GLY53
|
2.9
|
2.2
|
1.0
|
F2
|
A:AF3602
|
2.9
|
10.1
|
1.0
|
F1
|
A:AF3602
|
3.4
|
2.8
|
1.0
|
OG1
|
A:THR90
|
3.4
|
2.0
|
1.0
|
OD1
|
A:ASP52
|
3.6
|
5.6
|
1.0
|
CA
|
A:ASP52
|
3.6
|
2.3
|
1.0
|
K
|
A:K603
|
3.6
|
16.4
|
1.0
|
C
|
A:ASP52
|
3.7
|
2.0
|
1.0
|
O
|
A:HOH615
|
3.7
|
25.2
|
1.0
|
CA
|
A:GLY53
|
3.8
|
2.9
|
1.0
|
N
|
A:THR90
|
4.0
|
2.1
|
1.0
|
PB
|
A:ADP600
|
4.0
|
2.0
|
1.0
|
CB
|
A:THR89
|
4.1
|
2.0
|
1.0
|
O
|
A:LYS51
|
4.2
|
3.0
|
1.0
|
CG
|
A:ASP52
|
4.3
|
4.3
|
1.0
|
CB
|
A:ASP52
|
4.4
|
2.9
|
1.0
|
CB
|
A:THR90
|
4.4
|
2.3
|
1.0
|
O1B
|
A:ADP600
|
4.4
|
2.0
|
1.0
|
O3A
|
A:ADP600
|
4.4
|
2.6
|
1.0
|
N
|
A:THR89
|
4.5
|
2.1
|
1.0
|
OD2
|
A:ASP398
|
4.5
|
8.1
|
1.0
|
OD1
|
A:ASP87
|
4.6
|
2.0
|
1.0
|
N
|
A:VAL54
|
4.6
|
2.6
|
1.0
|
N
|
A:ASP52
|
4.7
|
3.3
|
1.0
|
MG
|
A:MG601
|
4.7
|
2.0
|
1.0
|
CA
|
A:THR89
|
4.7
|
2.0
|
1.0
|
C
|
A:GLY53
|
4.8
|
3.0
|
1.0
|
CA
|
A:THR90
|
4.8
|
2.0
|
1.0
|
O
|
A:ASP52
|
4.8
|
2.0
|
1.0
|
C
|
A:THR89
|
4.8
|
2.0
|
1.0
|
C
|
A:LYS51
|
4.9
|
3.3
|
1.0
|
O2A
|
A:ADP600
|
4.9
|
2.0
|
1.0
|
CG2
|
A:THR89
|
4.9
|
2.1
|
1.0
|
|
Fluorine binding site 4 out
of 21 in 1svt
Go back to
Fluorine Binding Sites List in 1svt
Fluorine binding site 4 out
of 21 in the Crystal Structure of GROEL14-GROES7-(Adp-Alfx)7
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 4 of Crystal Structure of GROEL14-GROES7-(Adp-Alfx)7 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:F602
b:2.1
occ:1.00
|
F1
|
B:AF3602
|
0.0
|
2.1
|
1.0
|
MG
|
B:MG601
|
1.8
|
2.0
|
1.0
|
AL
|
B:AF3602
|
1.9
|
8.0
|
1.0
|
O2A
|
B:ADP600
|
2.0
|
2.6
|
1.0
|
O1B
|
B:ADP600
|
2.3
|
2.0
|
1.0
|
PB
|
B:ADP600
|
2.9
|
2.2
|
1.0
|
OD1
|
B:ASP87
|
3.0
|
2.0
|
1.0
|
PA
|
B:ADP600
|
3.1
|
3.2
|
1.0
|
F2
|
B:AF3602
|
3.2
|
10.1
|
1.0
|
O3B
|
B:ADP600
|
3.2
|
3.2
|
1.0
|
O3A
|
B:ADP600
|
3.2
|
2.5
|
1.0
|
F3
|
B:AF3602
|
3.4
|
2.0
|
1.0
|
O1A
|
B:ADP600
|
3.8
|
2.0
|
1.0
|
K
|
B:K603
|
3.9
|
16.3
|
1.0
|
CG
|
B:ASP87
|
4.1
|
2.4
|
1.0
|
OD2
|
B:ASP398
|
4.2
|
8.1
|
1.0
|
O2B
|
B:ADP600
|
4.4
|
2.6
|
1.0
|
O5'
|
B:ADP600
|
4.4
|
2.1
|
1.0
|
OD2
|
B:ASP87
|
4.5
|
4.1
|
1.0
|
C5'
|
B:ADP600
|
4.7
|
2.5
|
1.0
|
O
|
B:SER151
|
4.8
|
2.4
|
1.0
|
N
|
B:GLY88
|
5.0
|
2.0
|
1.0
|
|
Fluorine binding site 5 out
of 21 in 1svt
Go back to
Fluorine Binding Sites List in 1svt
Fluorine binding site 5 out
of 21 in the Crystal Structure of GROEL14-GROES7-(Adp-Alfx)7
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 5 of Crystal Structure of GROEL14-GROES7-(Adp-Alfx)7 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:F602
b:10.1
occ:1.00
|
F2
|
B:AF3602
|
0.0
|
10.1
|
1.0
|
AL
|
B:AF3602
|
1.8
|
8.0
|
1.0
|
O3B
|
B:ADP600
|
2.1
|
3.2
|
1.0
|
OG1
|
B:THR89
|
2.6
|
2.3
|
1.0
|
N
|
B:GLY88
|
2.7
|
2.0
|
1.0
|
F3
|
B:AF3602
|
2.8
|
2.0
|
1.0
|
OD1
|
B:ASP87
|
2.9
|
2.0
|
1.0
|
PB
|
B:ADP600
|
2.9
|
2.2
|
1.0
|
N
|
B:THR89
|
2.9
|
2.0
|
1.0
|
O1B
|
B:ADP600
|
3.0
|
2.0
|
1.0
|
F1
|
B:AF3602
|
3.2
|
2.1
|
1.0
|
C
|
B:ASP87
|
3.2
|
2.0
|
1.0
|
CA
|
B:ASP87
|
3.4
|
2.0
|
1.0
|
CA
|
B:GLY88
|
3.5
|
2.0
|
1.0
|
C
|
B:GLY88
|
3.6
|
2.0
|
1.0
|
O2B
|
B:ADP600
|
3.6
|
2.6
|
1.0
|
CG
|
B:ASP87
|
3.8
|
2.4
|
1.0
|
CB
|
B:THR89
|
3.8
|
2.0
|
1.0
|
MG
|
B:MG601
|
3.9
|
2.0
|
1.0
|
CA
|
B:THR89
|
3.9
|
2.0
|
1.0
|
N
|
B:THR90
|
3.9
|
2.0
|
1.0
|
OD2
|
B:ASP398
|
4.1
|
8.1
|
1.0
|
O
|
B:ASP87
|
4.1
|
2.0
|
1.0
|
CB
|
B:ASP87
|
4.1
|
2.0
|
1.0
|
CG2
|
B:THR89
|
4.3
|
2.0
|
1.0
|
O3A
|
B:ADP600
|
4.3
|
2.5
|
1.0
|
C
|
B:THR89
|
4.5
|
2.0
|
1.0
|
OG1
|
B:THR90
|
4.5
|
2.5
|
1.0
|
N
|
B:ASP87
|
4.7
|
2.1
|
1.0
|
O2A
|
B:ADP600
|
4.7
|
2.6
|
1.0
|
OD1
|
B:ASP52
|
4.7
|
5.5
|
1.0
|
O
|
B:GLY88
|
4.7
|
2.3
|
1.0
|
OD2
|
B:ASP87
|
4.9
|
4.1
|
1.0
|
CB
|
B:THR90
|
5.0
|
2.0
|
1.0
|
|
Fluorine binding site 6 out
of 21 in 1svt
Go back to
Fluorine Binding Sites List in 1svt
Fluorine binding site 6 out
of 21 in the Crystal Structure of GROEL14-GROES7-(Adp-Alfx)7
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 6 of Crystal Structure of GROEL14-GROES7-(Adp-Alfx)7 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:F602
b:2.0
occ:1.00
|
F3
|
B:AF3602
|
0.0
|
2.0
|
1.0
|
AL
|
B:AF3602
|
1.8
|
8.0
|
1.0
|
O3B
|
B:ADP600
|
2.5
|
3.2
|
1.0
|
OG1
|
B:THR90
|
2.7
|
2.5
|
1.0
|
F2
|
B:AF3602
|
2.8
|
10.1
|
1.0
|
N
|
B:GLY53
|
2.8
|
2.0
|
1.0
|
OG1
|
B:THR89
|
3.0
|
2.3
|
1.0
|
K
|
B:K603
|
3.2
|
16.3
|
1.0
|
F1
|
B:AF3602
|
3.4
|
2.1
|
1.0
|
CA
|
B:GLY53
|
3.5
|
2.3
|
1.0
|
N
|
B:THR90
|
3.7
|
2.0
|
1.0
|
C
|
B:ASP52
|
3.7
|
2.0
|
1.0
|
PB
|
B:ADP600
|
3.7
|
2.2
|
1.0
|
CA
|
B:ASP52
|
3.8
|
2.2
|
1.0
|
CB
|
B:THR90
|
3.8
|
2.0
|
1.0
|
OD1
|
B:ASP52
|
4.0
|
5.5
|
1.0
|
O
|
B:LYS51
|
4.0
|
2.8
|
1.0
|
O3A
|
B:ADP600
|
4.1
|
2.5
|
1.0
|
CB
|
B:THR89
|
4.2
|
2.0
|
1.0
|
CA
|
B:THR90
|
4.3
|
2.0
|
1.0
|
O1B
|
B:ADP600
|
4.3
|
2.0
|
1.0
|
N
|
B:THR89
|
4.5
|
2.0
|
1.0
|
C
|
B:THR89
|
4.6
|
2.0
|
1.0
|
C
|
B:GLY53
|
4.6
|
2.5
|
1.0
|
CG
|
B:ASP52
|
4.7
|
4.1
|
1.0
|
N
|
B:VAL54
|
4.7
|
2.4
|
1.0
|
CA
|
B:THR89
|
4.7
|
2.0
|
1.0
|
N
|
B:ASP52
|
4.7
|
3.0
|
1.0
|
C
|
B:LYS51
|
4.8
|
3.0
|
1.0
|
CB
|
B:ASP52
|
4.8
|
2.7
|
1.0
|
O
|
B:ASP52
|
4.8
|
2.0
|
1.0
|
O2B
|
B:ADP600
|
4.8
|
2.6
|
1.0
|
OD2
|
B:ASP398
|
4.9
|
8.1
|
1.0
|
OD1
|
B:ASP87
|
4.9
|
2.0
|
1.0
|
O2A
|
B:ADP600
|
4.9
|
2.6
|
1.0
|
MG
|
B:MG601
|
4.9
|
2.0
|
1.0
|
PA
|
B:ADP600
|
4.9
|
3.2
|
1.0
|
|
Fluorine binding site 7 out
of 21 in 1svt
Go back to
Fluorine Binding Sites List in 1svt
Fluorine binding site 7 out
of 21 in the Crystal Structure of GROEL14-GROES7-(Adp-Alfx)7
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 7 of Crystal Structure of GROEL14-GROES7-(Adp-Alfx)7 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:F602
b:2.0
occ:1.00
|
F1
|
C:AF3602
|
0.0
|
2.0
|
1.0
|
MG
|
C:MG601
|
1.6
|
2.0
|
1.0
|
AL
|
C:AF3602
|
1.9
|
8.2
|
1.0
|
O2A
|
C:ADP600
|
2.1
|
2.4
|
1.0
|
O1B
|
C:ADP600
|
2.5
|
2.0
|
1.0
|
OD1
|
C:ASP87
|
2.9
|
2.9
|
1.0
|
F2
|
C:AF3602
|
3.1
|
10.6
|
1.0
|
PB
|
C:ADP600
|
3.2
|
2.5
|
1.0
|
PA
|
C:ADP600
|
3.3
|
2.0
|
1.0
|
F3
|
C:AF3602
|
3.4
|
2.0
|
1.0
|
O3B
|
C:ADP600
|
3.5
|
3.2
|
1.0
|
O3A
|
C:ADP600
|
3.5
|
2.6
|
1.0
|
OD2
|
C:ASP398
|
4.0
|
8.5
|
1.0
|
O1A
|
C:ADP600
|
4.1
|
2.0
|
1.0
|
CG
|
C:ASP87
|
4.1
|
3.1
|
1.0
|
K
|
C:K603
|
4.2
|
15.8
|
1.0
|
OD2
|
C:ASP87
|
4.5
|
4.5
|
1.0
|
O5'
|
C:ADP600
|
4.5
|
2.1
|
1.0
|
O
|
C:SER151
|
4.6
|
2.4
|
1.0
|
O2B
|
C:ADP600
|
4.7
|
2.3
|
1.0
|
C5'
|
C:ADP600
|
4.8
|
2.4
|
1.0
|
|
Fluorine binding site 8 out
of 21 in 1svt
Go back to
Fluorine Binding Sites List in 1svt
Fluorine binding site 8 out
of 21 in the Crystal Structure of GROEL14-GROES7-(Adp-Alfx)7
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 8 of Crystal Structure of GROEL14-GROES7-(Adp-Alfx)7 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:F602
b:10.6
occ:1.00
|
F2
|
C:AF3602
|
0.0
|
10.6
|
1.0
|
AL
|
C:AF3602
|
1.8
|
8.2
|
1.0
|
O3B
|
C:ADP600
|
1.9
|
3.2
|
1.0
|
N
|
C:GLY88
|
2.5
|
2.0
|
1.0
|
O1B
|
C:ADP600
|
2.5
|
2.0
|
1.0
|
PB
|
C:ADP600
|
2.6
|
2.5
|
1.0
|
OD1
|
C:ASP87
|
2.6
|
2.9
|
1.0
|
F3
|
C:AF3602
|
2.9
|
2.0
|
1.0
|
OG1
|
C:THR89
|
3.0
|
2.4
|
1.0
|
N
|
C:THR89
|
3.0
|
2.0
|
1.0
|
F1
|
C:AF3602
|
3.1
|
2.0
|
1.0
|
C
|
C:ASP87
|
3.2
|
2.0
|
1.0
|
CA
|
C:GLY88
|
3.3
|
2.0
|
1.0
|
CA
|
C:ASP87
|
3.4
|
2.0
|
1.0
|
MG
|
C:MG601
|
3.5
|
2.0
|
1.0
|
O2B
|
C:ADP600
|
3.5
|
2.3
|
1.0
|
C
|
C:GLY88
|
3.6
|
2.4
|
1.0
|
CG
|
C:ASP87
|
3.6
|
3.1
|
1.0
|
O3A
|
C:ADP600
|
4.0
|
2.6
|
1.0
|
N
|
C:THR90
|
4.0
|
2.0
|
1.0
|
CA
|
C:THR89
|
4.1
|
2.0
|
1.0
|
CB
|
C:ASP87
|
4.1
|
2.4
|
1.0
|
CB
|
C:THR89
|
4.1
|
2.0
|
1.0
|
OD2
|
C:ASP398
|
4.2
|
8.5
|
1.0
|
O
|
C:ASP87
|
4.2
|
2.0
|
1.0
|
O2A
|
C:ADP600
|
4.3
|
2.4
|
1.0
|
OG1
|
C:THR90
|
4.6
|
2.1
|
1.0
|
C
|
C:THR89
|
4.6
|
2.0
|
1.0
|
CG2
|
C:THR89
|
4.6
|
2.0
|
1.0
|
N
|
C:ASP87
|
4.7
|
2.0
|
1.0
|
O
|
C:GLY88
|
4.7
|
2.9
|
1.0
|
OD2
|
C:ASP87
|
4.8
|
4.5
|
1.0
|
PA
|
C:ADP600
|
4.9
|
2.0
|
1.0
|
|
Fluorine binding site 9 out
of 21 in 1svt
Go back to
Fluorine Binding Sites List in 1svt
Fluorine binding site 9 out
of 21 in the Crystal Structure of GROEL14-GROES7-(Adp-Alfx)7
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 9 of Crystal Structure of GROEL14-GROES7-(Adp-Alfx)7 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:F602
b:2.0
occ:1.00
|
F3
|
C:AF3602
|
0.0
|
2.0
|
1.0
|
AL
|
C:AF3602
|
1.8
|
8.2
|
1.0
|
O3B
|
C:ADP600
|
2.7
|
3.2
|
1.0
|
N
|
C:GLY53
|
2.8
|
2.1
|
1.0
|
OG1
|
C:THR90
|
2.9
|
2.1
|
1.0
|
F2
|
C:AF3602
|
2.9
|
10.6
|
1.0
|
OG1
|
C:THR89
|
3.1
|
2.4
|
1.0
|
K
|
C:K603
|
3.4
|
15.8
|
1.0
|
F1
|
C:AF3602
|
3.4
|
2.0
|
1.0
|
CA
|
C:GLY53
|
3.6
|
2.5
|
1.0
|
C
|
C:ASP52
|
3.7
|
2.0
|
1.0
|
CA
|
C:ASP52
|
3.7
|
2.4
|
1.0
|
OD1
|
C:ASP52
|
3.8
|
6.1
|
1.0
|
PB
|
C:ADP600
|
3.8
|
2.5
|
1.0
|
N
|
C:THR90
|
3.9
|
2.0
|
1.0
|
O
|
C:LYS51
|
3.9
|
2.9
|
1.0
|
CB
|
C:THR90
|
4.0
|
2.0
|
1.0
|
O3A
|
C:ADP600
|
4.3
|
2.6
|
1.0
|
CB
|
C:THR89
|
4.3
|
2.0
|
1.0
|
O1B
|
C:ADP600
|
4.4
|
2.0
|
1.0
|
CA
|
C:THR90
|
4.5
|
2.0
|
1.0
|
CG
|
C:ASP52
|
4.6
|
4.3
|
1.0
|
N
|
C:THR89
|
4.6
|
2.0
|
1.0
|
OD2
|
C:ASP398
|
4.6
|
8.5
|
1.0
|
N
|
C:ASP52
|
4.6
|
2.8
|
1.0
|
C
|
C:LYS51
|
4.7
|
2.7
|
1.0
|
CB
|
C:ASP52
|
4.7
|
3.0
|
1.0
|
C
|
C:GLY53
|
4.7
|
2.8
|
1.0
|
MG
|
C:MG601
|
4.8
|
2.0
|
1.0
|
C
|
C:THR89
|
4.8
|
2.0
|
1.0
|
O2A
|
C:ADP600
|
4.8
|
2.4
|
1.0
|
O
|
C:ASP52
|
4.8
|
2.0
|
1.0
|
N
|
C:VAL54
|
4.8
|
2.8
|
1.0
|
CA
|
C:THR89
|
4.8
|
2.0
|
1.0
|
OD1
|
C:ASP87
|
4.9
|
2.9
|
1.0
|
PA
|
C:ADP600
|
4.9
|
2.0
|
1.0
|
O2B
|
C:ADP600
|
5.0
|
2.3
|
1.0
|
|
Fluorine binding site 10 out
of 21 in 1svt
Go back to
Fluorine Binding Sites List in 1svt
Fluorine binding site 10 out
of 21 in the Crystal Structure of GROEL14-GROES7-(Adp-Alfx)7
Mono view
Stereo pair view
|
A full contact list of Fluorine with other atoms in the F binding
site number 10 of Crystal Structure of GROEL14-GROES7-(Adp-Alfx)7 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:F602
b:2.0
occ:1.00
|
F1
|
D:AF3602
|
0.0
|
2.0
|
1.0
|
MG
|
D:MG601
|
1.7
|
2.0
|
1.0
|
AL
|
D:AF3602
|
1.9
|
8.1
|
1.0
|
O2A
|
D:ADP600
|
2.0
|
2.0
|
1.0
|
O1B
|
D:ADP600
|
2.6
|
2.0
|
1.0
|
PA
|
D:ADP600
|
3.0
|
2.3
|
1.0
|
F2
|
D:AF3602
|
3.0
|
10.1
|
1.0
|
OD1
|
D:ASP87
|
3.1
|
2.2
|
1.0
|
PB
|
D:ADP600
|
3.1
|
2.5
|
1.0
|
O
|
D:HOH611
|
3.1
|
51.0
|
1.0
|
O3B
|
D:ADP600
|
3.4
|
3.4
|
1.0
|
O3A
|
D:ADP600
|
3.4
|
2.1
|
1.0
|
F3
|
D:AF3602
|
3.4
|
2.0
|
1.0
|
O1A
|
D:ADP600
|
3.7
|
2.0
|
1.0
|
K
|
D:K603
|
3.9
|
16.7
|
1.0
|
CG
|
D:ASP87
|
4.2
|
2.5
|
1.0
|
O5'
|
D:ADP600
|
4.4
|
2.0
|
1.0
|
OD2
|
D:ASP398
|
4.5
|
8.1
|
1.0
|
OD2
|
D:ASP87
|
4.6
|
3.5
|
1.0
|
C5'
|
D:ADP600
|
4.6
|
2.4
|
1.0
|
O2B
|
D:ADP600
|
4.6
|
2.3
|
1.0
|
O
|
D:SER151
|
4.8
|
2.6
|
1.0
|
NZ
|
D:LYS51
|
4.9
|
2.0
|
1.0
|
|
Reference:
C.Chaudhry,
A.L.Horwich,
A.T.Brunger,
P.D.Adams.
Exploring the Structural Dynamics of the E.Coli Chaperonin Groel Using Translation-Libration-Screw Crystallographic Refinement of Intermediate States. J.Mol.Biol. V. 342 229 2004.
ISSN: ISSN 0022-2836
PubMed: 15313620
DOI: 10.1016/J.JMB.2004.07.015
Page generated: Wed Jul 31 12:53:43 2024
|