Fluorine in PDB 1tgv: Structure of E. Coli Uridine Phosphorylase Complexed with 5- Fluorouridine and Sulfate

All present enzymatic activity of Structure of E. Coli Uridine Phosphorylase Complexed with 5- Fluorouridine and Sulfate:
2.4.2.3;

The structure of Structure of E. Coli Uridine Phosphorylase Complexed with 5- Fluorouridine and Sulfate, PDB code: 1tgv was solved by W.Bu, E.C.Settembre, J.M.Sanders, T.P.Begley, S.E.Ealick, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	20.00 / 2.20
Space group	H 3
Cell size a, b, c (Å), α, β, γ (°)	149.972, 149.972, 49.566, 90.00, 90.00, 120.00
R / Rfree (%)	17.5 / 22.4

The structure of Structure of E. Coli Uridine Phosphorylase Complexed with 5- Fluorouridine and Sulfate also contains other interesting chemical elements:

Potassium

(K)

1 atom

The binding sites of Fluorine atom in the Structure of E. Coli Uridine Phosphorylase Complexed with 5- Fluorouridine and Sulfate (pdb code 1tgv). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total 2 binding sites of Fluorine where determined in the Structure of E. Coli Uridine Phosphorylase Complexed with 5- Fluorouridine and Sulfate, PDB code: 1tgv:
Jump to Fluorine binding site number: 1; 2;

Fluorine binding site 1 out of 2 in the Structure of E. Coli Uridine Phosphorylase Complexed with 5- Fluorouridine and Sulfate


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Structure of E. Coli Uridine Phosphorylase Complexed with 5- Fluorouridine and Sulfate within 5.0Å range: probe atom residue distance (Å) B Occ A:F3001 b:35.9 occ:1.00 F5 A:5UD3001 0.0 35.9 1.0 C5 A:5UD3001 1.3 33.2 1.0 C4 A:5UD3001 2.4 31.5 1.0 C6 A:5UD3001 2.4 32.0 1.0 O4 A:5UD3001 2.7 27.8 1.0 CG1 A:ILE220 3.2 26.0 1.0 CD1 A:ILE220 3.2 23.6 1.0 CG1 A:VAL221 3.3 31.9 1.0 C A:THR95 3.4 25.7 1.0 O A:THR95 3.5 23.3 1.0 N A:GLY96 3.6 24.3 1.0 N3 A:5UD3001 3.7 28.8 1.0 N1 A:5UD3001 3.7 32.2 1.0 CA A:GLY96 3.8 23.6 1.0 CA A:THR95 4.1 25.0 1.0 C2 A:5UD3001 4.2 30.6 1.0 N A:THR95 4.3 25.8 1.0 CB A:VAL221 4.5 30.8 1.0 CB A:ILE220 4.7 27.8 1.0 O A:HOH3035 4.7 40.5 1.0 N A:VAL221 4.8 28.7 1.0 CE1 A:PHE162 4.9 23.6 1.0 NH2 A:ARG168 4.9 32.5 1.0 C1' A:5UD3001 4.9 36.4 1.0 C A:THR94 4.9 24.8 1.0

Fluorine binding site 2 out of 2 in the Structure of E. Coli Uridine Phosphorylase Complexed with 5- Fluorouridine and Sulfate


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 2 of Structure of E. Coli Uridine Phosphorylase Complexed with 5- Fluorouridine and Sulfate within 5.0Å range: probe atom residue distance (Å) B Occ B:F5002 b:36.5 occ:1.00 F5 B:5UD5002 0.0 36.5 1.0 C5 B:5UD5002 1.3 34.5 1.0 C4 B:5UD5002 2.4 33.7 1.0 C6 B:5UD5002 2.4 33.6 1.0 O4 B:5UD5002 2.7 32.9 1.0 C B:THR95 3.2 25.6 1.0 CG1 B:ILE220 3.3 26.0 1.0 CD1 B:ILE220 3.3 24.7 1.0 N B:GLY96 3.3 26.0 1.0 O B:THR95 3.4 23.8 1.0 CG1 B:VAL221 3.6 32.2 1.0 N3 B:5UD5002 3.7 32.9 1.0 N1 B:5UD5002 3.7 32.9 1.0 CA B:THR95 3.7 24.9 1.0 CA B:GLY96 3.8 26.0 1.0 N B:THR95 4.0 25.5 1.0 C2 B:5UD5002 4.2 31.5 1.0 C B:THR94 4.6 25.6 1.0 O B:HOH5084 4.7 33.9 1.0 CB B:VAL221 4.8 31.1 1.0 CB B:ILE220 4.8 25.8 1.0 C1' B:5UD5002 4.9 34.4 1.0 O B:THR94 4.9 25.2 1.0 CE1 B:PHE162 4.9 24.7 1.0 N B:VAL221 5.0 28.1 1.0

W.Bu, E.C.Settembre, J.M.Sanders, T.P.Begley, S.E.Ealick. Structures of E. Coli Uridine Phosphorylase To Be Published 2004.