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Fluorine in PDB 1z95: Crystal Structure of the Androgen Receptor Ligand-Binding Domain W741L Mutant Complex with R-Bicalutamide

Protein crystallography data

The structure of Crystal Structure of the Androgen Receptor Ligand-Binding Domain W741L Mutant Complex with R-Bicalutamide, PDB code: 1z95 was solved by C.E.Bohl, W.Gao, D.D.Miller, C.E.Bell, J.T.Dalton, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 24.46 / 1.80
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 56.490, 66.470, 72.160, 90.00, 90.00, 90.00
R / Rfree (%) 22.3 / 25.6

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Crystal Structure of the Androgen Receptor Ligand-Binding Domain W741L Mutant Complex with R-Bicalutamide (pdb code 1z95). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total 4 binding sites of Fluorine where determined in the Crystal Structure of the Androgen Receptor Ligand-Binding Domain W741L Mutant Complex with R-Bicalutamide, PDB code: 1z95:
Jump to Fluorine binding site number: 1; 2; 3; 4;

Fluorine binding site 1 out of 4 in 1z95

Go back to Fluorine Binding Sites List in 1z95
Fluorine binding site 1 out of 4 in the Crystal Structure of the Androgen Receptor Ligand-Binding Domain W741L Mutant Complex with R-Bicalutamide


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Crystal Structure of the Androgen Receptor Ligand-Binding Domain W741L Mutant Complex with R-Bicalutamide within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F501

b:37.3
occ:1.00
F18 A:198501 0.0 37.3 1.0
C18 A:198501 1.3 32.5 1.0
C19 A:198501 2.4 31.0 1.0
C17 A:198501 2.4 31.5 1.0
O A:HOH101 2.9 23.1 1.0
C20 A:198501 3.6 29.1 1.0
C16 A:198501 3.6 30.9 1.0
CG2 A:ILE898 3.8 23.0 1.0
NE2 A:HIS874 3.8 21.3 1.0
O A:GLN738 3.9 22.7 1.0
CG2 A:VAL903 4.0 24.1 1.0
CD2 A:HIS874 4.1 21.9 1.0
C15 A:198501 4.1 28.4 1.0
CD2 A:LEU741 4.3 20.7 1.0
CB A:LEU741 4.3 22.3 1.0
N A:MET742 4.3 20.6 1.0
CB A:MET742 4.5 21.7 1.0
CG A:LEU741 4.6 20.7 1.0
CE A:MET742 4.8 21.1 1.0
CA A:MET742 4.9 21.4 1.0
CB A:ILE898 4.9 26.9 1.0

Fluorine binding site 2 out of 4 in 1z95

Go back to Fluorine Binding Sites List in 1z95
Fluorine binding site 2 out of 4 in the Crystal Structure of the Androgen Receptor Ligand-Binding Domain W741L Mutant Complex with R-Bicalutamide


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 2 of Crystal Structure of the Androgen Receptor Ligand-Binding Domain W741L Mutant Complex with R-Bicalutamide within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F501

b:28.5
occ:1.00
F7B A:198501 0.0 28.5 1.0
C7 A:198501 1.3 28.2 1.0
F7C A:198501 2.1 29.0 1.0
F7A A:198501 2.1 27.5 1.0
C3 A:198501 2.3 24.6 1.0
C2 A:198501 3.2 23.5 1.0
N A:VAL746 3.2 23.7 1.0
CB A:MET745 3.2 25.1 1.0
C4 A:198501 3.3 24.6 1.0
C A:MET745 3.3 24.3 1.0
CG2 A:VAL746 3.4 23.7 1.0
CA A:VAL746 3.5 24.1 1.0
C8 A:198501 3.6 27.1 1.0
O A:MET745 3.7 24.9 1.0
O A:MET742 3.8 21.9 1.0
CA A:MET745 3.9 23.8 1.0
CB A:VAL746 4.1 24.5 1.0
N8 A:198501 4.1 23.0 1.0
SD A:MET742 4.3 24.1 1.0
CE A:MET745 4.4 28.6 1.0
C1 A:198501 4.4 26.7 1.0
C5 A:198501 4.5 24.6 1.0
CG A:MET745 4.5 24.3 1.0
CD1 A:LEU873 4.6 25.3 1.0
SD A:MET745 4.7 30.7 1.0
N A:MET745 4.8 22.6 1.0
C A:MET742 4.8 21.3 1.0
C A:VAL746 4.9 23.1 1.0
C6 A:198501 5.0 26.0 1.0

Fluorine binding site 3 out of 4 in 1z95

Go back to Fluorine Binding Sites List in 1z95
Fluorine binding site 3 out of 4 in the Crystal Structure of the Androgen Receptor Ligand-Binding Domain W741L Mutant Complex with R-Bicalutamide


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 3 of Crystal Structure of the Androgen Receptor Ligand-Binding Domain W741L Mutant Complex with R-Bicalutamide within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F501

b:29.0
occ:1.00
F7C A:198501 0.0 29.0 1.0
C7 A:198501 1.3 28.2 1.0
F7A A:198501 2.1 27.5 1.0
F7B A:198501 2.1 28.5 1.0
C3 A:198501 2.4 24.6 1.0
C8 A:198501 2.8 27.1 1.0
C4 A:198501 2.9 24.6 1.0
N8 A:198501 3.2 23.0 1.0
CE2 A:PHE764 3.5 24.7 1.0
CB A:MET749 3.6 23.9 1.0
C2 A:198501 3.6 23.5 1.0
CE A:MET749 3.6 32.4 1.0
CD2 A:PHE764 3.7 22.9 1.0
CG A:MET749 3.7 27.6 1.0
O A:MET745 3.8 24.9 1.0
CA A:VAL746 4.0 24.1 1.0
C A:MET745 4.1 24.3 1.0
N A:VAL746 4.2 23.7 1.0
SD A:MET787 4.2 29.5 1.0
C5 A:198501 4.3 24.6 1.0
CG2 A:VAL746 4.4 23.7 1.0
SD A:MET749 4.5 31.6 1.0
CB A:MET745 4.7 25.1 1.0
CZ A:PHE764 4.7 24.9 1.0
C1 A:198501 4.8 26.7 1.0
CB A:VAL746 4.8 24.5 1.0
CG A:PHE764 5.0 25.4 1.0

Fluorine binding site 4 out of 4 in 1z95

Go back to Fluorine Binding Sites List in 1z95
Fluorine binding site 4 out of 4 in the Crystal Structure of the Androgen Receptor Ligand-Binding Domain W741L Mutant Complex with R-Bicalutamide


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 4 of Crystal Structure of the Androgen Receptor Ligand-Binding Domain W741L Mutant Complex with R-Bicalutamide within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F501

b:27.5
occ:1.00
F7A A:198501 0.0 27.5 1.0
C7 A:198501 1.3 28.2 1.0
F7C A:198501 2.1 29.0 1.0
F7B A:198501 2.1 28.5 1.0
C3 A:198501 2.4 24.6 1.0
C2 A:198501 2.8 23.5 1.0
CD1 A:LEU873 3.6 25.3 1.0
C4 A:198501 3.6 24.6 1.0
SD A:MET787 3.8 29.5 1.0
CE2 A:PHE764 3.9 24.7 1.0
CG2 A:VAL746 3.9 23.7 1.0
C1 A:198501 4.2 26.7 1.0
C8 A:198501 4.2 27.1 1.0
O10 A:198501 4.3 27.9 1.0
CE A:MET787 4.3 26.6 1.0
CD2 A:PHE764 4.5 22.9 1.0
SD A:MET742 4.6 24.1 1.0
CD2 A:LEU873 4.7 25.0 1.0
CG A:LEU873 4.7 20.1 1.0
C5 A:198501 4.8 24.6 1.0
CA A:VAL746 4.8 24.1 1.0
CE A:MET749 4.9 32.4 1.0
CZ A:PHE764 4.9 24.9 1.0
N A:VAL746 5.0 23.7 1.0
CB A:VAL746 5.0 24.5 1.0
C6 A:198501 5.0 26.0 1.0
N8 A:198501 5.0 23.0 1.0
N9 A:198501 5.0 24.0 1.0

Reference:

C.E.Bohl, W.Gao, D.D.Miller, C.E.Bell, J.T.Dalton. Structural Basis For Antagonism and Resistance of Bicalutamide in Prostate Cancer. Proc.Natl.Acad.Sci.Usa V. 102 6201 2005.
ISSN: ISSN 0027-8424
PubMed: 15833816
DOI: 10.1073/PNAS.0500381102
Page generated: Wed Jul 31 13:37:05 2024

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