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Fluorine in PDB 2drj: Xray Structure of Alpha-2,3/8-Sialyltransferase Cstii F91Y Mutant

Protein crystallography data

The structure of Xray Structure of Alpha-2,3/8-Sialyltransferase Cstii F91Y Mutant, PDB code: 2drj was solved by C.P.C.Chiu, N.C.J.Strynadka, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 23.81 / 2.25
Space group I 4
Cell size a, b, c (Å), α, β, γ (°) 116.653, 116.653, 44.086, 90.00, 90.00, 90.00
R / Rfree (%) 19.4 / 26.1

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Xray Structure of Alpha-2,3/8-Sialyltransferase Cstii F91Y Mutant (pdb code 2drj). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total only one binding site of Fluorine was determined in the Xray Structure of Alpha-2,3/8-Sialyltransferase Cstii F91Y Mutant, PDB code: 2drj:

Fluorine binding site 1 out of 1 in 2drj

Go back to Fluorine Binding Sites List in 2drj
Fluorine binding site 1 out of 1 in the Xray Structure of Alpha-2,3/8-Sialyltransferase Cstii F91Y Mutant


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Xray Structure of Alpha-2,3/8-Sialyltransferase Cstii F91Y Mutant within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F1001

b:44.7
occ:1.00
F3A A:CSF1001 0.0 44.7 1.0
C3A A:CSF1001 1.4 51.5 1.0
C2A A:CSF1001 2.5 50.1 1.0
C4A A:CSF1001 2.5 52.5 1.0
C1A A:CSF1001 2.7 48.5 1.0
O4A A:CSF1001 2.9 53.9 1.0
O6A A:CSF1001 3.0 50.8 1.0
C5A A:CSF1001 3.0 54.4 1.0
OAA A:CSF1001 3.1 48.8 1.0
OBA A:CSF1001 3.2 50.1 1.0
C6A A:CSF1001 3.6 51.5 1.0
O1A A:CSF1001 3.8 51.8 1.0
O7A A:CSF1001 4.4 50.0 1.0
OH A:TYR156 4.4 66.9 1.0
CG2 A:THR131 4.4 27.4 1.0
N5A A:CSF1001 4.4 59.1 1.0
CA A:THR131 4.6 25.9 1.0
C7A A:CSF1001 4.6 49.8 1.0
CB A:THR131 4.8 26.1 1.0
O10 A:CSF1001 4.8 62.9 1.0
ND2 A:ASN51 4.9 30.0 1.0
O A:ILE130 5.0 30.5 1.0

Reference:

A.Aharoni, K.Thieme, C.P.C.Chiu, S.Buchini, L.L.Lairson, H.Chen, N.C.J.Strynadka, W.W.Wakarchuk, S.G.Withers. High-Throughput Screening Methodology For the Directed Evolution of Glycosyltransferases Nat.Methods V. 3 609 2006.
ISSN: ISSN 1548-7091
PubMed: 16862130
DOI: 10.1038/NMETH899
Page generated: Sun Dec 13 11:35:36 2020

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