Fluorine in PDB 2jm0: Solution Structure of Chicken Villin Headpiece Subdomain Containing A Fluorinated Side Chain in the Core

The binding sites of Fluorine atom in the Solution Structure of Chicken Villin Headpiece Subdomain Containing A Fluorinated Side Chain in the Core (pdb code 2jm0). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total 5 binding sites of Fluorine where determined in the Solution Structure of Chicken Villin Headpiece Subdomain Containing A Fluorinated Side Chain in the Core, PDB code: 2jm0:
Jump to Fluorine binding site number: 1; 2; 3; 4; 5;

Fluorine binding site 1 out of 5 in the Solution Structure of Chicken Villin Headpiece Subdomain Containing A Fluorinated Side Chain in the Core


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Solution Structure of Chicken Villin Headpiece Subdomain Containing A Fluorinated Side Chain in the Core within 5.0Å range: probe atom residue distance (Å) B Occ A:F10 b:0.0 occ:1.00 FD1 A:PF510 0.0 0.0 1.0 CD1 A:PF510 1.3 0.0 1.0 H A:PF510 2.2 0.0 1.0 CG A:PF510 2.4 0.0 1.0 CE1 A:PF510 2.4 0.0 1.0 HB3 A:PF510 2.5 0.0 1.0 O A:PHE6 2.6 0.0 1.0 HB A:VAL9 2.7 0.0 1.0 FE1 A:PF510 2.7 0.0 1.0 CB A:PF510 2.8 0.0 1.0 N A:PF510 2.9 0.0 1.0 CE1 A:PHE6 2.9 0.0 1.0 CD1 A:PHE6 3.1 0.0 1.0 CZ A:PHE6 3.1 0.0 1.0 CG A:PHE6 3.3 0.0 1.0 CE2 A:PHE6 3.4 0.0 1.0 C A:PHE6 3.4 0.0 1.0 HE1 A:PHE6 3.4 0.0 1.0 CA A:PF510 3.5 0.0 1.0 CD2 A:PHE6 3.5 0.0 1.0 HD1 A:PHE6 3.6 0.0 1.0 HZ A:PHE6 3.6 0.0 1.0 CD2 A:PF510 3.7 0.0 1.0 CZ A:PF510 3.7 0.0 1.0 HG12 A:VAL9 3.7 0.0 1.0 CB A:VAL9 3.7 0.0 1.0 HA A:PHE6 3.7 0.0 1.0 HB2 A:PF510 3.8 0.0 1.0 C A:VAL9 3.8 0.0 1.0 HA A:ARG7 4.0 0.0 1.0 CA A:PHE6 4.0 0.0 1.0 H A:VAL9 4.0 0.0 1.0 HE2 A:PHE6 4.0 0.0 1.0 H A:GLY11 4.0 0.0 1.0 CE2 A:PF510 4.1 0.0 1.0 CG1 A:VAL9 4.2 0.0 1.0 CA A:VAL9 4.2 0.0 1.0 H A:MET12 4.2 0.0 1.0 HD2 A:PHE6 4.2 0.0 1.0 N A:ARG7 4.2 0.0 1.0 O A:MET12 4.3 0.0 1.0 HA A:PF510 4.3 0.0 1.0 CB A:PHE6 4.3 0.0 1.0 N A:VAL9 4.3 0.0 1.0 HG3 A:MET12 4.3 0.0 1.0 C A:PF510 4.4 0.0 1.0 CA A:ARG7 4.5 0.0 1.0 HG13 A:VAL9 4.5 0.0 1.0 N A:GLY11 4.6 0.0 1.0 C A:ARG7 4.7 0.0 1.0 HB2 A:PHE17 4.7 0.0 1.0 FD2 A:PF510 4.8 0.0 1.0 FZ A:PF510 4.8 0.0 1.0 O A:ARG7 4.8 0.0 1.0 O A:VAL9 4.8 0.0 1.0 CG2 A:VAL9 4.8 0.0 1.0 HG23 A:VAL9 4.8 0.0 1.0 HG2 A:MET12 4.9 0.0 1.0 CD1 A:PHE17 4.9 0.0 1.0 HB3 A:PHE6 5.0 0.0 1.0 HD1 A:PHE17 5.0 0.0 1.0

Fluorine binding site 2 out of 5 in the Solution Structure of Chicken Villin Headpiece Subdomain Containing A Fluorinated Side Chain in the Core


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 2 of Solution Structure of Chicken Villin Headpiece Subdomain Containing A Fluorinated Side Chain in the Core within 5.0Å range: probe atom residue distance (Å) B Occ A:F10 b:0.0 occ:1.00 FD2 A:PF510 0.0 0.0 1.0 CD2 A:PF510 1.3 0.0 1.0 CE2 A:PF510 2.4 0.0 1.0 CG A:PF510 2.4 0.0 1.0 HB2 A:PF510 2.5 0.0 1.0 HE1 A:PHE17 2.7 0.0 1.0 FE2 A:PF510 2.7 0.0 1.0 CB A:PF510 2.8 0.0 1.0 HA A:PF510 2.9 0.0 1.0 CA A:PF510 3.4 0.0 1.0 CE1 A:PHE17 3.4 0.0 1.0 CZ A:PF510 3.7 0.0 1.0 CD1 A:PF510 3.7 0.0 1.0 HB3 A:PF510 3.8 0.0 1.0 HG12 A:VAL9 3.9 0.0 1.0 HZ A:PHE17 4.0 0.0 1.0 CZ A:PHE17 4.1 0.0 1.0 CE1 A:PF510 4.1 0.0 1.0 HB3 A:LEU28 4.2 0.0 1.0 N A:PF510 4.2 0.0 1.0 CD1 A:PHE17 4.2 0.0 1.0 HD1 A:PHE17 4.3 0.0 1.0 HD11 A:LEU28 4.4 0.0 1.0 O A:VAL9 4.4 0.0 1.0 HD3 A:ARG32 4.6 0.0 1.0 C A:PF510 4.6 0.0 1.0 C A:VAL9 4.6 0.0 1.0 O A:PF510 4.7 0.0 1.0 FZ A:PF510 4.8 0.0 1.0 FD1 A:PF510 4.8 0.0 1.0 H A:PF510 4.8 0.0 1.0 CG1 A:VAL9 5.0 0.0 1.0

Fluorine binding site 3 out of 5 in the Solution Structure of Chicken Villin Headpiece Subdomain Containing A Fluorinated Side Chain in the Core


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 3 of Solution Structure of Chicken Villin Headpiece Subdomain Containing A Fluorinated Side Chain in the Core within 5.0Å range: probe atom residue distance (Å) B Occ A:F10 b:0.0 occ:1.00 FE1 A:PF510 0.0 0.0 1.0 CE1 A:PF510 1.3 0.0 1.0 CD1 A:PF510 2.4 0.0 1.0 CZ A:PF510 2.4 0.0 1.0 FD1 A:PF510 2.7 0.0 1.0 FZ A:PF510 2.7 0.0 1.0 HB A:VAL9 2.8 0.0 1.0 CD2 A:PHE6 3.0 0.0 1.0 HD2 A:PHE6 3.0 0.0 1.0 CE2 A:PHE6 3.0 0.0 1.0 HE2 A:PHE6 3.1 0.0 1.0 HG13 A:VAL9 3.1 0.0 1.0 HD12 A:LEU34 3.3 0.0 1.0 HG12 A:VAL9 3.4 0.0 1.0 HA A:PHE6 3.4 0.0 1.0 CG1 A:VAL9 3.5 0.0 1.0 CB A:VAL9 3.6 0.0 1.0 CG A:PF510 3.7 0.0 1.0 CE2 A:PF510 3.7 0.0 1.0 HG23 A:VAL9 3.7 0.0 1.0 CG A:PHE6 3.7 0.0 1.0 CZ A:PHE6 3.8 0.0 1.0 CD1 A:LEU34 4.0 0.0 1.0 HD11 A:LEU34 4.0 0.0 1.0 O A:PHE6 4.1 0.0 1.0 HG2 A:ARG29 4.1 0.0 1.0 CD2 A:PF510 4.1 0.0 1.0 HD13 A:LEU34 4.2 0.0 1.0 CG2 A:VAL9 4.2 0.0 1.0 CA A:PHE6 4.3 0.0 1.0 H A:PF510 4.3 0.0 1.0 HZ A:PHE6 4.3 0.0 1.0 CD1 A:PHE6 4.4 0.0 1.0 CE1 A:PHE6 4.4 0.0 1.0 CB A:PHE6 4.5 0.0 1.0 C A:PHE6 4.6 0.0 1.0 HG11 A:VAL9 4.6 0.0 1.0 HB2 A:PHE6 4.6 0.0 1.0 N A:PF510 4.7 0.0 1.0 FE2 A:PF510 4.8 0.0 1.0 HG2 A:ARG32 4.8 0.0 1.0 HG21 A:VAL9 4.9 0.0 1.0 CA A:VAL9 4.9 0.0 1.0 HE1 A:PHE35 4.9 0.0 1.0 CB A:PF510 4.9 0.0 1.0 HB3 A:PF510 4.9 0.0 1.0 HG22 A:VAL9 5.0 0.0 1.0

Fluorine binding site 4 out of 5 in the Solution Structure of Chicken Villin Headpiece Subdomain Containing A Fluorinated Side Chain in the Core


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 4 of Solution Structure of Chicken Villin Headpiece Subdomain Containing A Fluorinated Side Chain in the Core within 5.0Å range: probe atom residue distance (Å) B Occ A:F10 b:0.0 occ:1.00 FE2 A:PF510 0.0 0.0 1.0 CE2 A:PF510 1.3 0.0 1.0 CD2 A:PF510 2.4 0.0 1.0 CZ A:PF510 2.4 0.0 1.0 FD2 A:PF510 2.7 0.0 1.0 FZ A:PF510 2.7 0.0 1.0 HB3 A:LEU28 3.0 0.0 1.0 HD3 A:ARG32 3.0 0.0 1.0 O A:LEU28 3.2 0.0 1.0 HB2 A:ARG32 3.4 0.0 1.0 HZ A:PHE17 3.4 0.0 1.0 HA A:ARG29 3.6 0.0 1.0 CG A:PF510 3.7 0.0 1.0 CE1 A:PF510 3.7 0.0 1.0 C A:LEU28 3.7 0.0 1.0 HG12 A:VAL9 3.7 0.0 1.0 HB2 A:LEU28 3.7 0.0 1.0 CB A:LEU28 3.8 0.0 1.0 CZ A:PHE17 4.0 0.0 1.0 CD A:ARG32 4.0 0.0 1.0 HE1 A:PHE17 4.0 0.0 1.0 CD1 A:PF510 4.1 0.0 1.0 HG2 A:ARG29 4.2 0.0 1.0 HG2 A:ARG32 4.2 0.0 1.0 CB A:ARG32 4.2 0.0 1.0 N A:ARG29 4.2 0.0 1.0 CA A:LEU28 4.3 0.0 1.0 CE1 A:PHE17 4.3 0.0 1.0 HG3 A:ARG29 4.3 0.0 1.0 CA A:ARG29 4.4 0.0 1.0 CG A:ARG32 4.4 0.0 1.0 HB3 A:ARG32 4.4 0.0 1.0 HG13 A:VAL9 4.4 0.0 1.0 HD2 A:ARG32 4.5 0.0 1.0 CG1 A:VAL9 4.5 0.0 1.0 HD11 A:LEU28 4.6 0.0 1.0 HA A:LEU28 4.7 0.0 1.0 CG A:ARG29 4.7 0.0 1.0 FE1 A:PF510 4.8 0.0 1.0 HH11 A:ARG32 4.8 0.0 1.0 H A:ARG29 4.9 0.0 1.0 CB A:PF510 4.9 0.0 1.0 HG11 A:VAL9 4.9 0.0 1.0 HB2 A:PF510 4.9 0.0 1.0 CE2 A:PHE17 5.0 0.0 1.0

Fluorine binding site 5 out of 5 in the Solution Structure of Chicken Villin Headpiece Subdomain Containing A Fluorinated Side Chain in the Core


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 5 of Solution Structure of Chicken Villin Headpiece Subdomain Containing A Fluorinated Side Chain in the Core within 5.0Å range: probe atom residue distance (Å) B Occ A:F10 b:0.0 occ:1.00 FZ A:PF510 0.0 0.0 1.0 CZ A:PF510 1.3 0.0 1.0 CE2 A:PF510 2.4 0.0 1.0 CE1 A:PF510 2.4 0.0 1.0 HG2 A:ARG29 2.7 0.0 1.0 FE2 A:PF510 2.7 0.0 1.0 FE1 A:PF510 2.7 0.0 1.0 HA A:ARG29 2.8 0.0 1.0 HD12 A:LEU34 2.8 0.0 1.0 HG13 A:VAL9 3.1 0.0 1.0 HG2 A:ARG32 3.2 0.0 1.0 HB3 A:ARG32 3.3 0.0 1.0 HG12 A:VAL9 3.4 0.0 1.0 HB2 A:ARG32 3.5 0.0 1.0 CD2 A:PF510 3.7 0.0 1.0 CD1 A:PF510 3.7 0.0 1.0 CG A:ARG29 3.7 0.0 1.0 CB A:ARG32 3.7 0.0 1.0 CG1 A:VAL9 3.7 0.0 1.0 CA A:ARG29 3.8 0.0 1.0 CD1 A:LEU34 3.8 0.0 1.0 HD3 A:ARG32 3.9 0.0 1.0 CG A:ARG32 3.9 0.0 1.0 HB2 A:LEU34 3.9 0.0 1.0 HG3 A:ARG29 4.0 0.0 1.0 HD13 A:LEU34 4.1 0.0 1.0 CG A:PF510 4.1 0.0 1.0 O A:LEU28 4.2 0.0 1.0 CB A:ARG29 4.2 0.0 1.0 HB3 A:ARG29 4.4 0.0 1.0 HD11 A:LEU34 4.4 0.0 1.0 HG11 A:VAL9 4.4 0.0 1.0 CD A:ARG32 4.5 0.0 1.0 HG A:LEU34 4.5 0.0 1.0 HB A:VAL9 4.5 0.0 1.0 N A:ARG29 4.5 0.0 1.0 HE2 A:PHE6 4.6 0.0 1.0 O A:ARG29 4.6 0.0 1.0 CG A:LEU34 4.6 0.0 1.0 HZ A:PHE17 4.7 0.0 1.0 C A:LEU28 4.7 0.0 1.0 C A:ARG29 4.7 0.0 1.0 CB A:VAL9 4.7 0.0 1.0 CB A:LEU34 4.8 0.0 1.0 FD2 A:PF510 4.8 0.0 1.0 FD1 A:PF510 4.8 0.0 1.0 HG3 A:ARG32 4.8 0.0 1.0 CD A:ARG29 4.8 0.0 1.0 HD3 A:ARG29 4.9 0.0 1.0 CZ A:PHE17 4.9 0.0 1.0 HD2 A:ARG29 5.0 0.0 1.0

G.Cornilescu, E.B.Hadley, M.G.Woll, J.L.Markley, S.H.Gellman, C.C.Cornilescu. Solution Structure of A Small Protein Containing A Fluorinated Side Chain in the Core. Protein Sci. V. 16 14 2007.
ISSN: ISSN 0961-8368
PubMed: 17123960
DOI: 10.1110/PS.062557707