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Fluorine in PDB 2l1r: The Structure of the Calcium-Sensitizer, Dfbp-O, in Complex with the N-Domain of Troponin C and the Switch Region of Troponin I

Other elements in 2l1r:

The structure of The Structure of the Calcium-Sensitizer, Dfbp-O, in Complex with the N-Domain of Troponin C and the Switch Region of Troponin I also contains other interesting chemical elements:

Calcium (Ca) 20 atoms

Fluorine Binding Sites:

The binding sites of Fluorine atom in the The Structure of the Calcium-Sensitizer, Dfbp-O, in Complex with the N-Domain of Troponin C and the Switch Region of Troponin I (pdb code 2l1r). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total 2 binding sites of Fluorine where determined in the The Structure of the Calcium-Sensitizer, Dfbp-O, in Complex with the N-Domain of Troponin C and the Switch Region of Troponin I, PDB code: 2l1r:
Jump to Fluorine binding site number: 1; 2;

Fluorine binding site 1 out of 2 in 2l1r

Go back to Fluorine Binding Sites List in 2l1r
Fluorine binding site 1 out of 2 in the The Structure of the Calcium-Sensitizer, Dfbp-O, in Complex with the N-Domain of Troponin C and the Switch Region of Troponin I


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of The Structure of the Calcium-Sensitizer, Dfbp-O, in Complex with the N-Domain of Troponin C and the Switch Region of Troponin I within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F91

b:20.0
occ:1.00
FCC A:SXK91 0.0 20.0 1.0
CAO A:SXK91 1.4 20.0 1.0
CAK A:SXK91 2.4 20.0 1.0
CAE A:SXK91 2.4 20.0 1.0
HAE A:SXK91 2.6 20.0 1.0
HAK A:SXK91 2.6 20.0 1.0
HE1 A:PHE77 2.8 0.0 1.0
CE1 A:PHE27 3.0 0.0 1.0
CZ A:PHE27 3.2 0.0 1.0
HE1 A:PHE27 3.2 0.0 1.0
HD12 A:ILE36 3.3 0.0 1.0
HD11 A:LEU41 3.3 0.0 1.0
HG21 A:ILE36 3.4 0.0 1.0
CD1 A:PHE27 3.4 0.0 1.0
HE2 B:MET153 3.5 0.0 1.0
HZ A:PHE27 3.5 0.0 1.0
HG22 A:ILE36 3.6 0.0 1.0
CAQ A:SXK91 3.7 20.0 1.0
CAJ A:SXK91 3.7 20.0 1.0
CE1 A:PHE77 3.7 0.0 1.0
HD1 A:PHE77 3.7 0.0 1.0
CE2 A:PHE27 3.8 0.0 1.0
HD1 A:PHE27 3.9 0.0 1.0
HE1 A:MET80 3.9 0.0 1.0
CG A:PHE27 3.9 0.0 1.0
HB2 A:LEU41 3.9 0.0 1.0
CG2 A:ILE36 4.0 0.0 1.0
CD2 A:PHE27 4.1 0.0 1.0
HA A:LEU41 4.1 0.0 1.0
HE1 B:MET153 4.1 0.0 1.0
CD1 A:PHE77 4.2 0.0 1.0
CAS A:SXK91 4.2 20.0 1.0
HG2 B:MET153 4.2 0.0 1.0
HE2 A:MET80 4.2 0.0 1.0
CD1 A:LEU41 4.3 0.0 1.0
CE B:MET153 4.3 0.0 1.0
CD1 A:ILE36 4.3 0.0 1.0
HD13 A:LEU41 4.4 0.0 1.0
HE2 A:PHE27 4.4 0.0 1.0
CE A:MET80 4.6 0.0 1.0
HAJ A:SXK91 4.6 20.0 1.0
HG23 A:ILE36 4.7 0.0 1.0
HB3 A:PHE27 4.7 0.0 1.0
CB A:LEU41 4.8 0.0 1.0
FDD A:SXK91 4.8 20.0 1.0
HD13 A:ILE36 4.8 0.0 1.0
HD22 A:LEU41 4.8 0.0 1.0
HD11 A:ILE36 4.8 0.0 1.0
HD2 A:PHE27 4.9 0.0 1.0
CZ A:PHE77 4.9 0.0 1.0
HG13 A:VAL72 4.9 0.0 1.0
HE3 B:MET153 4.9 0.0 1.0
CA A:LEU41 4.9 0.0 1.0
CB A:PHE27 5.0 0.0 1.0

Fluorine binding site 2 out of 2 in 2l1r

Go back to Fluorine Binding Sites List in 2l1r
Fluorine binding site 2 out of 2 in the The Structure of the Calcium-Sensitizer, Dfbp-O, in Complex with the N-Domain of Troponin C and the Switch Region of Troponin I


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 2 of The Structure of the Calcium-Sensitizer, Dfbp-O, in Complex with the N-Domain of Troponin C and the Switch Region of Troponin I within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F91

b:20.0
occ:1.00
FDD A:SXK91 0.0 20.0 1.0
CAQ A:SXK91 1.4 20.0 1.0
HD23 A:LEU41 2.3 0.0 1.0
CAK A:SXK91 2.4 20.0 1.0
CAS A:SXK91 2.4 20.0 1.0
HAK A:SXK91 2.6 20.0 1.0
HAH A:SXK91 2.7 20.0 1.0
CAR A:SXK91 2.9 20.0 1.0
HD22 A:LEU41 2.9 0.0 1.0
HB3 A:MET60 2.9 0.0 1.0
CAH A:SXK91 3.0 20.0 1.0
CD2 A:LEU41 3.0 0.0 1.0
SD A:MET60 3.1 0.0 1.0
HD13 A:LEU41 3.2 0.0 1.0
HG2 A:MET60 3.3 0.0 1.0
HE1 A:MET80 3.4 0.0 1.0
CG A:MET60 3.5 0.0 1.0
CB A:MET60 3.7 0.0 1.0
CAO A:SXK91 3.7 20.0 1.0
HD21 A:LEU41 3.7 0.0 1.0
CAJ A:SXK91 3.7 20.0 1.0
CAI A:SXK91 4.0 20.0 1.0
CD1 A:LEU41 4.0 0.0 1.0
HB2 A:MET60 4.1 0.0 1.0
SD A:MET80 4.1 0.0 1.0
CE A:MET80 4.1 0.0 1.0
CAF A:SXK91 4.1 20.0 1.0
CG A:LEU41 4.1 0.0 1.0
CAE A:SXK91 4.2 20.0 1.0
HD11 A:LEU41 4.2 0.0 1.0
HAI A:SXK91 4.4 20.0 1.0
HD11 A:LEU57 4.4 0.0 1.0
HE2 A:MET80 4.4 0.0 1.0
HE3 A:MET45 4.5 0.0 1.0
HB2 A:LEU41 4.5 0.0 1.0
HD12 B:ILE148 4.6 0.0 1.0
HG3 A:MET60 4.6 0.0 1.0
HAJ A:SXK91 4.6 20.0 1.0
HAF A:SXK91 4.7 20.0 1.0
FCC A:SXK91 4.8 20.0 1.0
CAG A:SXK91 4.9 20.0 1.0
HE1 A:MET45 4.9 0.0 1.0
HG A:LEU41 4.9 0.0 1.0
CA A:MET60 4.9 0.0 1.0
HE2 B:MET153 4.9 0.0 1.0
CE A:MET60 4.9 0.0 1.0
CAP A:SXK91 5.0 20.0 1.0
HD12 A:LEU41 5.0 0.0 1.0
HE2 A:MET45 5.0 0.0 1.0
CB A:LEU41 5.0 0.0 1.0

Reference:

I.M.Robertson, Y.B.Sun, M.X.Li, B.D.Sykes. A Structural and Functional Perspective Into the Mechanism of Ca(2+)-Sensitizers That Target the Cardiac Troponin Complex. J.Mol.Cell.Cardiol. V. 49 1031 2010.
ISSN: ISSN 0022-2828
PubMed: 20801130
DOI: 10.1016/J.YJMCC.2010.08.019
Page generated: Sun Dec 13 11:37:56 2020

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