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Fluorine in PDB 2opb: Structure of K57A Hpnmt with Inhibitor 3-Fluoromethyl-7- Thiomorpholinosulfonamide-Thiq and Adohcy

Enzymatic activity of Structure of K57A Hpnmt with Inhibitor 3-Fluoromethyl-7- Thiomorpholinosulfonamide-Thiq and Adohcy

All present enzymatic activity of Structure of K57A Hpnmt with Inhibitor 3-Fluoromethyl-7- Thiomorpholinosulfonamide-Thiq and Adohcy:
2.1.1.28;

Protein crystallography data

The structure of Structure of K57A Hpnmt with Inhibitor 3-Fluoromethyl-7- Thiomorpholinosulfonamide-Thiq and Adohcy, PDB code: 2opb was solved by N.Drinkwater, J.L.Martin, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 54.40 / 2.80
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 94.420, 94.420, 187.670, 90.00, 90.00, 90.00
R / Rfree (%) 23.6 / 27.7

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Structure of K57A Hpnmt with Inhibitor 3-Fluoromethyl-7- Thiomorpholinosulfonamide-Thiq and Adohcy (pdb code 2opb). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total 2 binding sites of Fluorine where determined in the Structure of K57A Hpnmt with Inhibitor 3-Fluoromethyl-7- Thiomorpholinosulfonamide-Thiq and Adohcy, PDB code: 2opb:
Jump to Fluorine binding site number: 1; 2;

Fluorine binding site 1 out of 2 in 2opb

Go back to Fluorine Binding Sites List in 2opb
Fluorine binding site 1 out of 2 in the Structure of K57A Hpnmt with Inhibitor 3-Fluoromethyl-7- Thiomorpholinosulfonamide-Thiq and Adohcy


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Structure of K57A Hpnmt with Inhibitor 3-Fluoromethyl-7- Thiomorpholinosulfonamide-Thiq and Adohcy within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F4001

b:71.5
occ:1.00
F1 A:F214001 0.0 71.5 1.0
C11 A:F214001 1.4 72.4 1.0
C3 A:F214001 2.4 69.2 1.0
OE2 A:GLU219 2.6 68.0 1.0
N2 A:F214001 3.0 67.8 1.0
CD2 A:TYR222 3.2 75.3 1.0
CE2 A:TYR222 3.4 73.7 1.0
CD A:GLU219 3.6 67.5 1.0
CG A:TYR222 3.6 76.7 1.0
C4 A:F214001 3.7 69.3 1.0
OE1 A:GLU219 3.9 67.6 1.0
CB A:ALA186 3.9 76.9 1.0
CG2 A:VAL231 3.9 70.2 1.0
CZ A:TYR222 4.0 75.4 1.0
CD1 A:TYR222 4.1 77.5 1.0
CB A:TYR222 4.2 73.5 1.0
C1 A:F214001 4.2 67.0 1.0
CE1 A:TYR222 4.3 77.4 1.0
CG1 A:VAL231 4.7 73.1 1.0
OH A:TYR222 4.8 76.1 1.0
CA A:ALA186 4.8 79.5 1.0
O A:PHE182 4.8 76.8 1.0
CG A:GLU219 4.9 70.2 1.0
C10 A:F214001 4.9 67.2 1.0
CB A:ALA216 4.9 68.5 1.0
CB A:VAL231 5.0 74.0 1.0
CB A:PHE182 5.0 67.9 1.0

Fluorine binding site 2 out of 2 in 2opb

Go back to Fluorine Binding Sites List in 2opb
Fluorine binding site 2 out of 2 in the Structure of K57A Hpnmt with Inhibitor 3-Fluoromethyl-7- Thiomorpholinosulfonamide-Thiq and Adohcy


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 2 of Structure of K57A Hpnmt with Inhibitor 3-Fluoromethyl-7- Thiomorpholinosulfonamide-Thiq and Adohcy within 5.0Å range:
probe atom residue distance (Å) B Occ
B:F4002

b:79.6
occ:1.00
F1 B:F214002 0.0 79.6 1.0
C11 B:F214002 1.4 73.7 1.0
C3 B:F214002 2.4 68.6 1.0
OE2 B:GLU219 2.8 74.5 1.0
N2 B:F214002 3.0 63.8 1.0
CD2 B:TYR222 3.4 71.3 1.0
CB B:ALA186 3.5 70.8 1.0
CE2 B:TYR222 3.6 72.8 1.0
C4 B:F214002 3.7 68.9 1.0
CG B:TYR222 4.0 70.6 1.0
CD B:GLU219 4.0 78.1 1.0
C1 B:F214002 4.2 65.4 1.0
CZ B:TYR222 4.3 73.3 1.0
CG2 B:VAL231 4.4 79.8 1.0
OE1 B:GLU219 4.5 78.6 1.0
CG1 B:VAL231 4.5 82.8 1.0
CB B:TYR222 4.5 73.1 1.0
O B:PHE182 4.5 69.5 1.0
CA B:ALA186 4.5 71.5 1.0
CD1 B:TYR222 4.6 68.6 1.0
CB B:PHE182 4.7 63.3 1.0
CE1 B:TYR222 4.8 70.3 1.0
CB B:ALA216 4.9 66.7 1.0
C10 B:F214002 4.9 67.1 1.0

Reference:

C.L.Gee, N.Drinkwater, J.D.Tyndall, G.L.Grunewald, Q.Wu, M.J.Mcleish, J.L.Martin. Enzyme Adaptation to Inhibitor Binding: A Cryptic Binding Site in Phenylethanolamine N-Methyltransferase. J.Med.Chem. V. 50 4845 2007.
ISSN: ISSN 0022-2623
PubMed: 17845018
DOI: 10.1021/JM0703385
Page generated: Wed Jul 31 15:24:59 2024

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