Atomistry » Fluorine » PDB 2weg-2x2f » 2wfg
Atomistry »
  Fluorine »
    PDB 2weg-2x2f »
      2wfg »

Fluorine in PDB 2wfg: Structure of the Candida Albicans Cytosolic Leucyl-Trna Synthetase Editing Domain Bound to A Benzoxaborole-Amp Adduct

Protein crystallography data

The structure of Structure of the Candida Albicans Cytosolic Leucyl-Trna Synthetase Editing Domain Bound to A Benzoxaborole-Amp Adduct, PDB code: 2wfg was solved by E.Seiradake, W.Mao, V.Hernandez, S.J.Baker, J.J.Plattner, M.R.K.Alley, S.Cusack, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 49.88 / 2.20
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 43.020, 58.040, 97.550, 90.00, 90.00, 90.00
R / Rfree (%) 18.45 / 26.155

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Structure of the Candida Albicans Cytosolic Leucyl-Trna Synthetase Editing Domain Bound to A Benzoxaborole-Amp Adduct (pdb code 2wfg). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total only one binding site of Fluorine was determined in the Structure of the Candida Albicans Cytosolic Leucyl-Trna Synthetase Editing Domain Bound to A Benzoxaborole-Amp Adduct, PDB code: 2wfg:

Fluorine binding site 1 out of 1 in 2wfg

Go back to Fluorine Binding Sites List in 2wfg
Fluorine binding site 1 out of 1 in the Structure of the Candida Albicans Cytosolic Leucyl-Trna Synthetase Editing Domain Bound to A Benzoxaborole-Amp Adduct


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Structure of the Candida Albicans Cytosolic Leucyl-Trna Synthetase Editing Domain Bound to A Benzoxaborole-Amp Adduct within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F1529

b:12.1
occ:1.00
F A:ZZB1529 0.0 12.1 1.0
CE1 A:ZZB1529 1.4 11.2 1.0
CD1 A:ZZB1529 2.4 10.0 1.0
CZ A:ZZB1529 2.4 11.3 1.0
ND A:ZZB1529 2.7 11.0 1.0
CB A:ASP418 3.1 9.6 1.0
C A:ASP418 3.1 9.8 1.0
O A:ASP418 3.2 9.9 1.0
N A:SER419 3.5 9.7 1.0
CG2 A:THR321 3.6 8.9 1.0
CA A:ASP418 3.6 9.8 1.0
CG A:ZZB1529 3.6 10.2 1.0
CE2 A:ZZB1529 3.7 9.6 1.0
NH1 A:ARG318 3.8 14.7 1.0
CB A:SER419 3.9 9.6 1.0
CD A:ARG318 4.0 14.2 1.0
CG1 A:VAL415 4.0 7.8 1.0
CA A:SER419 4.0 10.1 1.0
CB A:THR321 4.1 9.8 1.0
CD2 A:ZZB1529 4.1 9.4 1.0
OG1 A:THR321 4.2 9.4 1.0
CZ A:ARG318 4.2 15.3 1.0
CK A:ZZB1529 4.2 10.2 1.0
NE A:ARG318 4.2 14.8 1.0
CB A:VAL415 4.3 7.8 1.0
N A:ASP418 4.4 9.8 1.0
O A:VAL415 4.4 8.2 1.0
CG A:ASP418 4.5 11.2 1.0
CB A:ARG318 4.8 10.9 1.0
CF A:ZZB1529 4.8 9.8 1.0
CB A:ZZB1529 4.9 9.7 1.0
CG A:ARG318 4.9 12.2 1.0

Reference:

E.Seiradake, W.Mao, V.Hernandez, S.J.Baker, J.J.Plattner, M.R.K.Alley, S.Cusack. Crystal Structures of the Human and Fungal Cytosolic Leucyl-Trna Synthetase Editing Domains: A Structural Basis For the Rational Design of Antifungal Benzoxaboroles. J.Mol.Biol. V. 390 196 2009.
ISSN: ISSN 0022-2836
PubMed: 19426743
DOI: 10.1016/J.JMB.2009.04.073
Page generated: Wed Jul 31 16:25:07 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy