Fluorine in PDB 2woj: Adp-ALF4 Complex of S. Cerevisiae GET3
Enzymatic activity of Adp-ALF4 Complex of S. Cerevisiae GET3
All present enzymatic activity of Adp-ALF4 Complex of S. Cerevisiae GET3:
3.6.3.16;
Protein crystallography data
The structure of Adp-ALF4 Complex of S. Cerevisiae GET3, PDB code: 2woj
was solved by
A.Mateja,
A.Szlachcic,
M.E.Downing,
M.Dobosz,
M.Mariappan,
R.S.Hegde,
R.J.Keenan,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
|
Resolution Low / High (Å)
|
37.441 /
1.99
|
|
Space group
|
P 1 21 1
|
|
Cell size a, b, c (Å), α, β, γ (°)
|
53.612,
82.628,
167.282,
90.00,
98.28,
90.00
|
|
R / Rfree (%)
|
17.59 /
21.27
|
Other elements in 2woj:
The structure of Adp-ALF4 Complex of S. Cerevisiae GET3 also contains other interesting chemical elements:
Fluorine Binding Sites:
Pages:
>>> Page 1 <<<
Page 2, Binding sites: 11 -
16;
Binding sites:
The binding sites of Fluorine atom in the Adp-ALF4 Complex of S. Cerevisiae GET3
(pdb code 2woj). This binding sites where shown within
5.0 Angstroms radius around Fluorine atom.
In total 16 binding sites of Fluorine where determined in the
Adp-ALF4 Complex of S. Cerevisiae GET3, PDB code: 2woj:
Jump to Fluorine binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Fluorine binding site 1 out
of 16 in 2woj
Go back to
Fluorine Binding Sites List in 2woj
Fluorine binding site 1 out
of 16 in the Adp-ALF4 Complex of S. Cerevisiae GET3
 Mono view
 Stereo pair view
|
|
A full contact list of Fluorine with other atoms in the F binding
site number 1 of Adp-ALF4 Complex of S. Cerevisiae GET3 within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F402
b:33.6
occ:1.00
|
F1
|
A:ALF402
|
0.0
|
33.6
|
1.0
|
|
AL
|
A:ALF402
|
1.7
|
29.1
|
1.0
|
|
F4
|
A:ALF402
|
2.4
|
34.4
|
1.0
|
|
F3
|
A:ALF402
|
2.4
|
25.0
|
1.0
|
|
O1B
|
A:ADP401
|
2.5
|
23.4
|
1.0
|
|
O
|
A:HOH2023
|
2.6
|
23.6
|
1.0
|
|
N
|
B:GLY27
|
2.7
|
21.6
|
1.0
|
|
NZ
|
B:LYS26
|
2.9
|
22.4
|
1.0
|
|
CA
|
B:GLY27
|
3.0
|
21.4
|
1.0
|
|
CG
|
B:LYS26
|
3.1
|
25.6
|
1.0
|
|
O
|
B:GLY27
|
3.4
|
20.7
|
1.0
|
|
N
|
A:GLY28
|
3.5
|
20.6
|
1.0
|
|
F2
|
A:ALF402
|
3.5
|
32.4
|
1.0
|
|
C
|
B:GLY27
|
3.6
|
25.0
|
1.0
|
|
CE
|
B:LYS26
|
3.7
|
23.7
|
1.0
|
|
O
|
B:HOH2101
|
3.8
|
25.6
|
1.0
|
|
C
|
B:LYS26
|
3.9
|
21.1
|
1.0
|
|
CA
|
A:GLY28
|
4.0
|
21.0
|
1.0
|
|
CD
|
B:LYS26
|
4.0
|
22.2
|
1.0
|
|
PB
|
A:ADP401
|
4.1
|
21.0
|
1.0
|
|
O
|
A:HOH2029
|
4.2
|
12.9
|
1.0
|
|
C
|
A:GLY27
|
4.3
|
20.7
|
1.0
|
|
CA
|
A:GLY27
|
4.3
|
20.5
|
1.0
|
|
CB
|
B:LYS26
|
4.3
|
23.0
|
1.0
|
|
O
|
B:HOH2019
|
4.4
|
33.0
|
1.0
|
|
CA
|
B:LYS26
|
4.5
|
21.9
|
1.0
|
|
O
|
A:HOH2133
|
4.7
|
24.3
|
1.0
|
|
O2B
|
A:ADP401
|
4.8
|
22.3
|
1.0
|
|
N
|
B:GLY28
|
4.8
|
23.9
|
1.0
|
|
O3A
|
A:ADP401
|
4.8
|
21.3
|
1.0
|
|
O
|
B:LYS26
|
4.8
|
23.1
|
1.0
|
|
O3B
|
A:ADP401
|
4.8
|
22.7
|
1.0
|
|
MG
|
A:MG403
|
4.9
|
28.8
|
1.0
|
|
CG
|
A:PRO169
|
4.9
|
29.9
|
1.0
|
|
NZ
|
A:LYS31
|
4.9
|
21.8
|
1.0
|
|
Fluorine binding site 2 out
of 16 in 2woj
Go back to
Fluorine Binding Sites List in 2woj
Fluorine binding site 2 out
of 16 in the Adp-ALF4 Complex of S. Cerevisiae GET3
 Mono view
 Stereo pair view
|
|
A full contact list of Fluorine with other atoms in the F binding
site number 2 of Adp-ALF4 Complex of S. Cerevisiae GET3 within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F402
b:32.4
occ:1.00
|
F2
|
A:ALF402
|
0.0
|
32.4
|
1.0
|
|
AL
|
A:ALF402
|
1.8
|
29.1
|
1.0
|
|
MG
|
A:MG403
|
2.0
|
28.8
|
1.0
|
|
F4
|
A:ALF402
|
2.5
|
34.4
|
1.0
|
|
O
|
A:HOH2066
|
2.6
|
29.5
|
1.0
|
|
F3
|
A:ALF402
|
2.6
|
25.0
|
1.0
|
|
O2B
|
A:ADP401
|
2.7
|
22.3
|
1.0
|
|
O1B
|
A:ADP401
|
2.7
|
23.4
|
1.0
|
|
O
|
A:HOH2023
|
2.7
|
23.6
|
1.0
|
|
O
|
A:HOH2025
|
2.9
|
22.3
|
1.0
|
|
PB
|
A:ADP401
|
3.1
|
21.0
|
1.0
|
|
OD2
|
A:ASP57
|
3.2
|
28.8
|
1.0
|
|
O
|
A:HOH2133
|
3.3
|
24.3
|
1.0
|
|
F1
|
A:ALF402
|
3.5
|
33.6
|
1.0
|
|
CE
|
A:LYS31
|
3.5
|
23.1
|
1.0
|
|
NZ
|
A:LYS31
|
3.6
|
21.8
|
1.0
|
|
O3B
|
A:ADP401
|
3.9
|
22.7
|
1.0
|
|
O
|
A:HOH2029
|
4.0
|
12.9
|
1.0
|
|
OG1
|
A:THR32
|
4.1
|
24.3
|
1.0
|
|
O
|
A:THR167
|
4.3
|
23.3
|
1.0
|
|
CG
|
A:ASP57
|
4.4
|
26.0
|
1.0
|
|
O3A
|
A:ADP401
|
4.5
|
21.3
|
1.0
|
|
CD
|
A:PRO169
|
4.6
|
27.8
|
1.0
|
|
ND2
|
A:ASN61
|
4.7
|
27.9
|
1.0
|
|
CB
|
A:LYS31
|
4.7
|
21.2
|
1.0
|
|
NZ
|
B:LYS26
|
4.8
|
22.4
|
1.0
|
|
CG
|
A:PRO169
|
4.8
|
29.9
|
1.0
|
|
CB
|
A:ASP57
|
4.9
|
27.3
|
1.0
|
|
CD
|
A:LYS31
|
4.9
|
22.9
|
1.0
|
|
Fluorine binding site 3 out
of 16 in 2woj
Go back to
Fluorine Binding Sites List in 2woj
Fluorine binding site 3 out
of 16 in the Adp-ALF4 Complex of S. Cerevisiae GET3
 Mono view
 Stereo pair view
|
|
A full contact list of Fluorine with other atoms in the F binding
site number 3 of Adp-ALF4 Complex of S. Cerevisiae GET3 within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F402
b:25.0
occ:1.00
|
F3
|
A:ALF402
|
0.0
|
25.0
|
1.0
|
|
AL
|
A:ALF402
|
1.8
|
29.1
|
1.0
|
|
F1
|
A:ALF402
|
2.4
|
33.6
|
1.0
|
|
O
|
A:HOH2023
|
2.5
|
23.6
|
1.0
|
|
O1B
|
A:ADP401
|
2.6
|
23.4
|
1.0
|
|
F2
|
A:ALF402
|
2.6
|
32.4
|
1.0
|
|
NZ
|
A:LYS31
|
2.7
|
21.8
|
1.0
|
|
CA
|
A:GLY27
|
3.0
|
20.5
|
1.0
|
|
N
|
A:GLY28
|
3.0
|
20.6
|
1.0
|
|
CG
|
A:PRO169
|
3.2
|
29.9
|
1.0
|
|
PB
|
A:ADP401
|
3.5
|
21.0
|
1.0
|
|
F4
|
A:ALF402
|
3.5
|
34.4
|
1.0
|
|
C
|
A:GLY27
|
3.5
|
20.7
|
1.0
|
|
CE
|
A:LYS31
|
3.6
|
23.1
|
1.0
|
|
O3B
|
A:ADP401
|
3.6
|
22.7
|
1.0
|
|
CA
|
B:GLY27
|
3.9
|
21.4
|
1.0
|
|
CD
|
A:PRO169
|
4.0
|
27.8
|
1.0
|
|
O2B
|
A:ADP401
|
4.2
|
22.3
|
1.0
|
|
N
|
A:GLY27
|
4.2
|
25.9
|
1.0
|
|
CA
|
A:GLY28
|
4.2
|
21.0
|
1.0
|
|
O
|
A:LYS26
|
4.2
|
21.8
|
1.0
|
|
CB
|
A:PRO169
|
4.3
|
29.9
|
1.0
|
|
N
|
B:GLY27
|
4.4
|
21.6
|
1.0
|
|
MG
|
A:MG403
|
4.5
|
28.8
|
1.0
|
|
C
|
A:LYS26
|
4.6
|
23.6
|
1.0
|
|
C
|
B:GLY27
|
4.6
|
25.0
|
1.0
|
|
N
|
A:PRO169
|
4.7
|
22.2
|
1.0
|
|
OD2
|
A:ASP57
|
4.7
|
28.8
|
1.0
|
|
NZ
|
B:LYS26
|
4.8
|
22.4
|
1.0
|
|
CA
|
A:PRO169
|
4.8
|
22.6
|
1.0
|
|
O
|
A:HOH2066
|
4.8
|
29.5
|
1.0
|
|
O
|
A:GLY27
|
4.8
|
21.1
|
1.0
|
|
O3A
|
A:ADP401
|
4.8
|
21.3
|
1.0
|
|
O
|
B:GLY27
|
4.9
|
20.7
|
1.0
|
|
O
|
B:HOH2101
|
5.0
|
25.6
|
1.0
|
|
CD
|
A:LYS31
|
5.0
|
22.9
|
1.0
|
|
Fluorine binding site 4 out
of 16 in 2woj
Go back to
Fluorine Binding Sites List in 2woj
Fluorine binding site 4 out
of 16 in the Adp-ALF4 Complex of S. Cerevisiae GET3
 Mono view
 Stereo pair view
|
|
A full contact list of Fluorine with other atoms in the F binding
site number 4 of Adp-ALF4 Complex of S. Cerevisiae GET3 within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:F402
b:34.4
occ:1.00
|
F4
|
A:ALF402
|
0.0
|
34.4
|
1.0
|
|
AL
|
A:ALF402
|
1.8
|
29.1
|
1.0
|
|
F1
|
A:ALF402
|
2.4
|
33.6
|
1.0
|
|
F2
|
A:ALF402
|
2.5
|
32.4
|
1.0
|
|
O
|
A:HOH2029
|
2.5
|
12.9
|
1.0
|
|
O
|
A:HOH2133
|
2.6
|
24.3
|
1.0
|
|
O1B
|
A:ADP401
|
2.7
|
23.4
|
1.0
|
|
O
|
A:HOH2023
|
2.8
|
23.6
|
1.0
|
|
NZ
|
B:LYS26
|
2.9
|
22.4
|
1.0
|
|
ND2
|
A:ASN61
|
3.0
|
27.9
|
1.0
|
|
CE
|
B:LYS26
|
3.0
|
23.7
|
1.0
|
|
MG
|
A:MG403
|
3.1
|
28.8
|
1.0
|
|
O
|
A:HOH2025
|
3.4
|
22.3
|
1.0
|
|
F3
|
A:ALF402
|
3.5
|
25.0
|
1.0
|
|
CG
|
B:LYS26
|
3.7
|
25.6
|
1.0
|
|
O2B
|
A:ADP401
|
3.8
|
22.3
|
1.0
|
|
OD2
|
A:ASP57
|
3.8
|
28.8
|
1.0
|
|
PB
|
A:ADP401
|
3.9
|
21.0
|
1.0
|
|
CD
|
B:LYS26
|
4.0
|
22.2
|
1.0
|
|
O
|
B:HOH2101
|
4.0
|
25.6
|
1.0
|
|
O2A
|
A:ADP401
|
4.1
|
24.8
|
1.0
|
|
CG
|
A:ASN61
|
4.2
|
30.1
|
1.0
|
|
OE2
|
B:GLU251
|
4.3
|
28.5
|
1.0
|
|
O3A
|
A:ADP401
|
4.6
|
21.3
|
1.0
|
|
O
|
A:HOH2066
|
4.7
|
29.5
|
1.0
|
|
N
|
B:GLY27
|
4.7
|
21.6
|
1.0
|
|
OG1
|
A:THR32
|
4.9
|
24.3
|
1.0
|
|
OE1
|
B:GLU251
|
5.0
|
25.7
|
1.0
|
|
O
|
A:ALA59
|
5.0
|
29.3
|
1.0
|
|
Fluorine binding site 5 out
of 16 in 2woj
Go back to
Fluorine Binding Sites List in 2woj
Fluorine binding site 5 out
of 16 in the Adp-ALF4 Complex of S. Cerevisiae GET3
 Mono view
 Stereo pair view
|
|
A full contact list of Fluorine with other atoms in the F binding
site number 5 of Adp-ALF4 Complex of S. Cerevisiae GET3 within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:F402
b:31.7
occ:1.00
|
F1
|
B:ALF402
|
0.0
|
31.7
|
1.0
|
|
AL
|
B:ALF402
|
1.7
|
27.9
|
1.0
|
|
F4
|
B:ALF402
|
2.4
|
35.2
|
1.0
|
|
F3
|
B:ALF402
|
2.4
|
25.1
|
1.0
|
|
O
|
B:HOH2032
|
2.6
|
25.5
|
1.0
|
|
O1B
|
B:ADP401
|
2.6
|
20.8
|
1.0
|
|
N
|
A:GLY27
|
2.8
|
25.9
|
1.0
|
|
NZ
|
A:LYS26
|
2.8
|
22.5
|
1.0
|
|
CA
|
A:GLY27
|
3.1
|
20.5
|
1.0
|
|
CG
|
A:LYS26
|
3.1
|
23.6
|
1.0
|
|
O
|
A:GLY27
|
3.4
|
21.1
|
1.0
|
|
F2
|
B:ALF402
|
3.5
|
29.0
|
1.0
|
|
N
|
B:GLY28
|
3.5
|
23.9
|
1.0
|
|
CE
|
A:LYS26
|
3.6
|
24.9
|
1.0
|
|
C
|
A:GLY27
|
3.6
|
20.7
|
1.0
|
|
O
|
A:HOH2091
|
3.9
|
25.8
|
1.0
|
|
C
|
A:LYS26
|
3.9
|
23.6
|
1.0
|
|
CD
|
A:LYS26
|
3.9
|
28.3
|
1.0
|
|
O
|
A:HOH2090
|
4.0
|
14.7
|
1.0
|
|
CA
|
B:GLY28
|
4.1
|
26.4
|
1.0
|
|
PB
|
B:ADP401
|
4.1
|
22.3
|
1.0
|
|
CB
|
A:LYS26
|
4.3
|
23.4
|
1.0
|
|
O
|
A:HOH2009
|
4.3
|
32.7
|
1.0
|
|
CA
|
A:LYS26
|
4.4
|
26.1
|
1.0
|
|
C
|
B:GLY27
|
4.4
|
25.0
|
1.0
|
|
CA
|
B:GLY27
|
4.5
|
21.4
|
1.0
|
|
O
|
B:HOH2154
|
4.6
|
25.2
|
1.0
|
|
O2B
|
B:ADP401
|
4.8
|
21.6
|
1.0
|
|
O3B
|
B:ADP401
|
4.8
|
25.4
|
1.0
|
|
MG
|
B:MG403
|
4.9
|
27.4
|
1.0
|
|
N
|
A:GLY28
|
4.9
|
20.6
|
1.0
|
|
O
|
A:LYS26
|
4.9
|
21.8
|
1.0
|
|
O3A
|
B:ADP401
|
4.9
|
21.6
|
1.0
|
|
Fluorine binding site 6 out
of 16 in 2woj
Go back to
Fluorine Binding Sites List in 2woj
Fluorine binding site 6 out
of 16 in the Adp-ALF4 Complex of S. Cerevisiae GET3
 Mono view
 Stereo pair view
|
|
A full contact list of Fluorine with other atoms in the F binding
site number 6 of Adp-ALF4 Complex of S. Cerevisiae GET3 within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:F402
b:29.0
occ:1.00
|
F2
|
B:ALF402
|
0.0
|
29.0
|
1.0
|
|
AL
|
B:ALF402
|
1.8
|
27.9
|
1.0
|
|
MG
|
B:MG403
|
2.0
|
27.4
|
1.0
|
|
F4
|
B:ALF402
|
2.4
|
35.2
|
1.0
|
|
O1B
|
B:ADP401
|
2.5
|
20.8
|
1.0
|
|
O
|
B:HOH2078
|
2.6
|
27.2
|
1.0
|
|
F3
|
B:ALF402
|
2.6
|
25.1
|
1.0
|
|
O2B
|
B:ADP401
|
2.7
|
21.6
|
1.0
|
|
O
|
B:HOH2032
|
2.7
|
25.5
|
1.0
|
|
O
|
B:HOH2031
|
3.0
|
24.0
|
1.0
|
|
PB
|
B:ADP401
|
3.1
|
22.3
|
1.0
|
|
OD2
|
B:ASP57
|
3.2
|
29.2
|
1.0
|
|
O
|
B:HOH2154
|
3.3
|
25.2
|
1.0
|
|
F1
|
B:ALF402
|
3.5
|
31.7
|
1.0
|
|
CE
|
B:LYS31
|
3.7
|
22.1
|
1.0
|
|
NZ
|
B:LYS31
|
3.7
|
24.2
|
1.0
|
|
O3B
|
B:ADP401
|
3.7
|
25.4
|
1.0
|
|
O
|
A:HOH2090
|
4.0
|
14.7
|
1.0
|
|
OG1
|
B:THR32
|
4.1
|
24.6
|
1.0
|
|
CG
|
B:ASP57
|
4.4
|
28.7
|
1.0
|
|
O
|
B:THR167
|
4.4
|
22.9
|
1.0
|
|
O3A
|
B:ADP401
|
4.4
|
21.6
|
1.0
|
|
CB
|
B:LYS31
|
4.7
|
24.6
|
1.0
|
|
NZ
|
A:LYS26
|
4.7
|
22.5
|
1.0
|
|
CD
|
B:PRO169
|
4.8
|
28.5
|
1.0
|
|
ND2
|
B:ASN61
|
4.8
|
35.5
|
1.0
|
|
CG
|
B:PRO169
|
4.9
|
27.3
|
1.0
|
|
CB
|
B:ASP57
|
4.9
|
24.3
|
1.0
|
|
O2A
|
B:ADP401
|
5.0
|
24.7
|
1.0
|
|
Fluorine binding site 7 out
of 16 in 2woj
Go back to
Fluorine Binding Sites List in 2woj
Fluorine binding site 7 out
of 16 in the Adp-ALF4 Complex of S. Cerevisiae GET3
 Mono view
 Stereo pair view
|
|
A full contact list of Fluorine with other atoms in the F binding
site number 7 of Adp-ALF4 Complex of S. Cerevisiae GET3 within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:F402
b:25.1
occ:1.00
|
F3
|
B:ALF402
|
0.0
|
25.1
|
1.0
|
|
AL
|
B:ALF402
|
1.8
|
27.9
|
1.0
|
|
O
|
B:HOH2032
|
2.4
|
25.5
|
1.0
|
|
F1
|
B:ALF402
|
2.4
|
31.7
|
1.0
|
|
O1B
|
B:ADP401
|
2.6
|
20.8
|
1.0
|
|
F2
|
B:ALF402
|
2.6
|
29.0
|
1.0
|
|
NZ
|
B:LYS31
|
2.8
|
24.2
|
1.0
|
|
N
|
B:GLY28
|
3.0
|
23.9
|
1.0
|
|
CA
|
B:GLY27
|
3.1
|
21.4
|
1.0
|
|
CG
|
B:PRO169
|
3.4
|
27.3
|
1.0
|
|
PB
|
B:ADP401
|
3.5
|
22.3
|
1.0
|
|
F4
|
B:ALF402
|
3.5
|
35.2
|
1.0
|
|
O3B
|
B:ADP401
|
3.5
|
25.4
|
1.0
|
|
C
|
B:GLY27
|
3.5
|
25.0
|
1.0
|
|
CE
|
B:LYS31
|
3.7
|
22.1
|
1.0
|
|
CA
|
A:GLY27
|
4.0
|
20.5
|
1.0
|
|
CA
|
B:GLY28
|
4.1
|
26.4
|
1.0
|
|
CD
|
B:PRO169
|
4.1
|
28.5
|
1.0
|
|
O2B
|
B:ADP401
|
4.2
|
21.6
|
1.0
|
|
N
|
B:GLY27
|
4.2
|
21.6
|
1.0
|
|
O
|
B:LYS26
|
4.3
|
23.1
|
1.0
|
|
N
|
A:GLY27
|
4.4
|
25.9
|
1.0
|
|
CB
|
B:PRO169
|
4.4
|
22.9
|
1.0
|
|
MG
|
B:MG403
|
4.5
|
27.4
|
1.0
|
|
C
|
A:GLY27
|
4.6
|
20.7
|
1.0
|
|
C
|
B:LYS26
|
4.7
|
21.1
|
1.0
|
|
NZ
|
A:LYS26
|
4.7
|
22.5
|
1.0
|
|
N
|
B:PRO169
|
4.7
|
25.0
|
1.0
|
|
OD2
|
B:ASP57
|
4.8
|
29.2
|
1.0
|
|
O
|
B:GLY27
|
4.8
|
20.7
|
1.0
|
|
O
|
A:GLY27
|
4.8
|
21.1
|
1.0
|
|
O3A
|
B:ADP401
|
4.9
|
21.6
|
1.0
|
|
CA
|
B:PRO169
|
4.9
|
24.7
|
1.0
|
|
O
|
B:HOH2078
|
4.9
|
27.2
|
1.0
|
|
Fluorine binding site 8 out
of 16 in 2woj
Go back to
Fluorine Binding Sites List in 2woj
Fluorine binding site 8 out
of 16 in the Adp-ALF4 Complex of S. Cerevisiae GET3
 Mono view
 Stereo pair view
|
|
A full contact list of Fluorine with other atoms in the F binding
site number 8 of Adp-ALF4 Complex of S. Cerevisiae GET3 within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:F402
b:35.2
occ:1.00
|
F4
|
B:ALF402
|
0.0
|
35.2
|
1.0
|
|
AL
|
B:ALF402
|
1.8
|
27.9
|
1.0
|
|
O
|
A:HOH2090
|
2.4
|
14.7
|
1.0
|
|
F2
|
B:ALF402
|
2.4
|
29.0
|
1.0
|
|
F1
|
B:ALF402
|
2.4
|
31.7
|
1.0
|
|
O
|
B:HOH2154
|
2.5
|
25.2
|
1.0
|
|
O1B
|
B:ADP401
|
2.7
|
20.8
|
1.0
|
|
O
|
B:HOH2032
|
2.8
|
25.5
|
1.0
|
|
NZ
|
A:LYS26
|
3.0
|
22.5
|
1.0
|
|
MG
|
B:MG403
|
3.0
|
27.4
|
1.0
|
|
ND2
|
B:ASN61
|
3.0
|
35.5
|
1.0
|
|
CE
|
A:LYS26
|
3.1
|
24.9
|
1.0
|
|
O
|
B:HOH2031
|
3.4
|
24.0
|
1.0
|
|
F3
|
B:ALF402
|
3.5
|
25.1
|
1.0
|
|
O2B
|
B:ADP401
|
3.7
|
21.6
|
1.0
|
|
OD2
|
B:ASP57
|
3.7
|
29.2
|
1.0
|
|
CG
|
A:LYS26
|
3.8
|
23.6
|
1.0
|
|
PB
|
B:ADP401
|
3.9
|
22.3
|
1.0
|
|
O
|
A:HOH2091
|
4.0
|
25.8
|
1.0
|
|
CD
|
A:LYS26
|
4.1
|
28.3
|
1.0
|
|
O2A
|
B:ADP401
|
4.1
|
24.7
|
1.0
|
|
CG
|
B:ASN61
|
4.3
|
30.8
|
1.0
|
|
OE1
|
A:GLU251
|
4.4
|
29.0
|
1.0
|
|
O
|
B:HOH2078
|
4.6
|
27.2
|
1.0
|
|
O3A
|
B:ADP401
|
4.6
|
21.6
|
1.0
|
|
OG1
|
B:THR32
|
4.8
|
24.6
|
1.0
|
|
O
|
B:ALA59
|
4.8
|
29.1
|
1.0
|
|
N
|
A:GLY27
|
4.9
|
25.9
|
1.0
|
|
CG
|
B:ASP57
|
4.9
|
28.7
|
1.0
|
|
CB
|
B:ASN61
|
5.0
|
26.9
|
1.0
|
|
Fluorine binding site 9 out
of 16 in 2woj
Go back to
Fluorine Binding Sites List in 2woj
Fluorine binding site 9 out
of 16 in the Adp-ALF4 Complex of S. Cerevisiae GET3
 Mono view
 Stereo pair view
|
|
A full contact list of Fluorine with other atoms in the F binding
site number 9 of Adp-ALF4 Complex of S. Cerevisiae GET3 within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:F402
b:33.6
occ:1.00
|
F1
|
C:ALF402
|
0.0
|
33.6
|
1.0
|
|
AL
|
C:ALF402
|
1.7
|
29.6
|
1.0
|
|
F4
|
C:ALF402
|
2.4
|
41.7
|
1.0
|
|
O
|
C:HOH2027
|
2.5
|
30.6
|
1.0
|
|
F3
|
C:ALF402
|
2.5
|
29.7
|
1.0
|
|
O1B
|
C:ADP401
|
2.6
|
25.9
|
1.0
|
|
N
|
D:GLY27
|
2.7
|
28.4
|
1.0
|
|
NZ
|
D:LYS26
|
3.0
|
29.4
|
1.0
|
|
CA
|
D:GLY27
|
3.0
|
30.5
|
1.0
|
|
CG
|
D:LYS26
|
3.1
|
31.9
|
1.0
|
|
F2
|
C:ALF402
|
3.5
|
28.7
|
1.0
|
|
O
|
D:GLY27
|
3.5
|
28.7
|
1.0
|
|
CE
|
D:LYS26
|
3.6
|
29.7
|
1.0
|
|
N
|
C:GLY28
|
3.6
|
25.6
|
1.0
|
|
C
|
D:GLY27
|
3.6
|
33.4
|
1.0
|
|
O
|
D:HOH2065
|
3.6
|
30.4
|
1.0
|
|
C
|
D:LYS26
|
3.9
|
28.7
|
1.0
|
|
CD
|
D:LYS26
|
4.0
|
33.6
|
1.0
|
|
O
|
C:HOH2034
|
4.0
|
15.2
|
1.0
|
|
PB
|
C:ADP401
|
4.1
|
25.4
|
1.0
|
|
CA
|
C:GLY28
|
4.2
|
25.1
|
1.0
|
|
CB
|
D:LYS26
|
4.3
|
33.9
|
1.0
|
|
CA
|
D:LYS26
|
4.4
|
35.5
|
1.0
|
|
C
|
C:GLY27
|
4.5
|
29.3
|
1.0
|
|
CA
|
C:GLY27
|
4.5
|
31.0
|
1.0
|
|
O
|
D:HOH2009
|
4.6
|
31.4
|
1.0
|
|
O
|
C:HOH2033
|
4.6
|
25.2
|
1.0
|
|
O2B
|
C:ADP401
|
4.8
|
28.5
|
1.0
|
|
MG
|
C:MG403
|
4.8
|
30.4
|
1.0
|
|
N
|
D:GLY28
|
4.9
|
28.5
|
1.0
|
|
O
|
D:LYS26
|
4.9
|
28.8
|
1.0
|
|
CG
|
C:PRO169
|
4.9
|
30.4
|
1.0
|
|
O3B
|
C:ADP401
|
4.9
|
29.3
|
1.0
|
|
OD2
|
C:ASP57
|
4.9
|
29.1
|
1.0
|
|
O3A
|
C:ADP401
|
5.0
|
24.3
|
1.0
|
|
ND2
|
C:ASN61
|
5.0
|
31.9
|
1.0
|
|
Fluorine binding site 10 out
of 16 in 2woj
Go back to
Fluorine Binding Sites List in 2woj
Fluorine binding site 10 out
of 16 in the Adp-ALF4 Complex of S. Cerevisiae GET3
 Mono view
 Stereo pair view
|
|
A full contact list of Fluorine with other atoms in the F binding
site number 10 of Adp-ALF4 Complex of S. Cerevisiae GET3 within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:F402
b:28.7
occ:1.00
|
F2
|
C:ALF402
|
0.0
|
28.7
|
1.0
|
|
AL
|
C:ALF402
|
1.8
|
29.6
|
1.0
|
|
MG
|
C:MG403
|
2.0
|
30.4
|
1.0
|
|
F4
|
C:ALF402
|
2.4
|
41.7
|
1.0
|
|
O
|
C:HOH2066
|
2.6
|
29.9
|
1.0
|
|
O2B
|
C:ADP401
|
2.6
|
28.5
|
1.0
|
|
F3
|
C:ALF402
|
2.6
|
29.7
|
1.0
|
|
O1B
|
C:ADP401
|
2.6
|
25.9
|
1.0
|
|
O
|
C:HOH2027
|
2.9
|
30.6
|
1.0
|
|
O
|
C:HOH2026
|
3.0
|
28.4
|
1.0
|
|
PB
|
C:ADP401
|
3.0
|
25.4
|
1.0
|
|
O
|
C:HOH2033
|
3.4
|
25.2
|
1.0
|
|
OD2
|
C:ASP57
|
3.4
|
29.1
|
1.0
|
|
F1
|
C:ALF402
|
3.5
|
33.6
|
1.0
|
|
CE
|
C:LYS31
|
3.6
|
30.1
|
1.0
|
|
NZ
|
C:LYS31
|
3.6
|
31.8
|
1.0
|
|
O3B
|
C:ADP401
|
3.7
|
29.3
|
1.0
|
|
OG1
|
C:THR32
|
4.0
|
27.4
|
1.0
|
|
O
|
C:HOH2034
|
4.1
|
15.2
|
1.0
|
|
O
|
C:THR167
|
4.3
|
26.9
|
1.0
|
|
O3A
|
C:ADP401
|
4.4
|
24.3
|
1.0
|
|
CG
|
C:ASP57
|
4.5
|
25.6
|
1.0
|
|
ND2
|
C:ASN61
|
4.7
|
31.9
|
1.0
|
|
CB
|
C:LYS31
|
4.7
|
25.8
|
1.0
|
|
CD
|
C:PRO169
|
4.7
|
33.8
|
1.0
|
|
CG
|
C:PRO169
|
4.8
|
30.4
|
1.0
|
|
NZ
|
D:LYS26
|
4.9
|
29.4
|
1.0
|
|
CB
|
C:ASP57
|
4.9
|
25.5
|
1.0
|
|
CD
|
C:LYS31
|
4.9
|
26.0
|
1.0
|
|
N
|
C:THR32
|
4.9
|
27.0
|
1.0
|
|
Reference:
A.Mateja,
A.Szlachcic,
M.E.Downing,
M.Dobosz,
M.Mariappan,
R.S.Hegde,
R.J.Keenan.
The Structural Basis of Tail-Anchored Membrane Protein Recognition By GET3. Nature V. 461 361 2009.
ISSN: ISSN 0028-0836
PubMed: 19675567
DOI: 10.1038/NATURE08319
Page generated: Sun Dec 13 11:41:07 2020
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