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Fluorine in PDB 3b2q: Intermediate Position of Atp on Its Trail to the Binding Pocket Inside the Subunit B Mutant R416W of the Energy Converter A1AO Atp Synthase

Enzymatic activity of Intermediate Position of Atp on Its Trail to the Binding Pocket Inside the Subunit B Mutant R416W of the Energy Converter A1AO Atp Synthase

All present enzymatic activity of Intermediate Position of Atp on Its Trail to the Binding Pocket Inside the Subunit B Mutant R416W of the Energy Converter A1AO Atp Synthase:
3.6.3.14;

Protein crystallography data

The structure of Intermediate Position of Atp on Its Trail to the Binding Pocket Inside the Subunit B Mutant R416W of the Energy Converter A1AO Atp Synthase, PDB code: 3b2q was solved by A.Kumar, M.S.S.Manimekalai, A.M.Balakrishna, C.Hunke, G.Gruber, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 26.96 / 2.10
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 73.473, 96.094, 130.275, 90.00, 90.00, 90.00
R / Rfree (%) 18.9 / 23.7

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Intermediate Position of Atp on Its Trail to the Binding Pocket Inside the Subunit B Mutant R416W of the Energy Converter A1AO Atp Synthase (pdb code 3b2q). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total only one binding site of Fluorine was determined in the Intermediate Position of Atp on Its Trail to the Binding Pocket Inside the Subunit B Mutant R416W of the Energy Converter A1AO Atp Synthase, PDB code: 3b2q:

Fluorine binding site 1 out of 1 in 3b2q

Go back to Fluorine Binding Sites List in 3b2q
Fluorine binding site 1 out of 1 in the Intermediate Position of Atp on Its Trail to the Binding Pocket Inside the Subunit B Mutant R416W of the Energy Converter A1AO Atp Synthase


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Intermediate Position of Atp on Its Trail to the Binding Pocket Inside the Subunit B Mutant R416W of the Energy Converter A1AO Atp Synthase within 5.0Å range:
probe atom residue distance (Å) B Occ
B:F462

b:43.2
occ:1.00
 F B:AES462 0.0 43.2 1.0
S B:AES462 1.6 41.3 1.0
O2S B:AES462 1.8 41.3 1.0
O1S B:AES462 2.5 37.5 1.0
O5 B:CIT463 2.8 74.0 1.0
C1 B:AES462 3.1 40.6 1.0
O1 B:CIT463 3.1 69.3 1.0
CD B:LYS20 3.4 39.8 1.0
C6 B:AES462 3.6 39.6 1.0
C6 B:CIT463 3.8 74.3 1.0
O7 B:CIT463 3.9 75.8 1.0
CE B:LYS20 3.9 41.7 1.0
NZ B:LYS20 4.2 42.9 1.0
C1 B:CIT463 4.3 70.4 1.0
C2 B:AES462 4.3 40.8 1.0
C3 B:CIT463 4.4 74.5 1.0
CG B:LYS20 4.5 32.9 1.0
CA B:PRO23 4.5 18.7 1.0
O6 B:CIT463 4.7 75.9 1.0
CB B:PRO23 4.8 19.5 1.0
N B:VAL24 5.0 15.2 1.0
C5 B:AES462 5.0 41.3 1.0
C2 B:CIT463 5.0 73.3 1.0
O B:ALA49 5.0 37.6 1.0

Reference:

A.Kumar, M.S.S.Manimekalai, A.M.Balakrishna, C.Hunke, S.Weigelt, N.Sewald, G.Gruber. Spectroscopic and Crystallographic Studies of the Mutant R416W Give Insight Into the Nucleotide Binding Traits of Subunit B of the A1AO Atp Synthase Proteins V. 75 807 2009.
ISSN: ISSN 0887-3585
PubMed: 19003877
DOI: 10.1002/PROT.22289
Page generated: Sun Dec 13 11:43:11 2020

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