Chemical elements
  Fluorine
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    PDB 16pk-1c8m
    PDB 1c9d-1eau
    PDB 1ec0-1grn
    PDB 1gs4-1j97
    PDB 1jdj-1mu8
    PDB 1mue-1oyt
    PDB 1oz1-1rby
    PDB 1rbz-1tu6
    PDB 1tuy-1w9i
    PDB 1w9j-1yw2
    PDB 1yw9-2ax8
    PDB 2ax9-2dqt
    PDB 2dqu-2ftk
    PDB 2fvd-2hhn
    PDB 2hiw-2izs
    PDB 2j51-2onh
    PDB 2oo8-2pow
    PDB 2pq9-2qzl
    PDB 2qzo-2vev
    PDB 2vew-2wf7
    PDB 2wf8-2xhd
    PDB 2xkk-3ar9
    PDB 3az8-3cej
    PDB 3cem-3dh3
    PDB 3dhf-3el7
    PDB 3el8-3fln
    PDB 3flq-3gc7
      3flq
      3fls
      3flw
      3fly
      3fmh
      3fmk
      3fml
      3fmm
      3fmn
      3fmz
      3foe
      3fof
      3fpb
      3fqk
      3fql
      3fqs
      3fr4
      3frj
      3ft8
      3fu0
      3fuc
      3fuf
      3fxw
      3fxz
      3fyg
      3fzr
      3g0e
      3g0f
      3g0w
      3g1l
      3g1v
      3g30
      3g35
      3g3d
      3g3m
      3g3n
      3g4f
      3g4l
      3g5e
      3g6h
      3g70
      3g72
      3g86
      3g8n
      3g8o
      3g90
      3g9l
      3g9n
      3gb9
      3gc7
    PDB 3gc8-3h7w
    PDB 3h82-3i81
    PDB 3i8d-3jx1
    PDB 3jx2-3ktk
    PDB 3ktu-3lj6
    PDB 3lk9-3mqf
    PDB 3ms4-3nz7
    PDB 3o1g-3p4a
    PDB 3p4b-3ti1
    PDB 3tik-4acx
    PDB 4afe-4fk3
    PDB 4fod-7gch

Fluorine in the structure of Kit Kinase Domain Mutant D816H in Complex With Sunitinib (pdb 3g0f)






The binding sites of Fluorine atom in the structure of Kit Kinase Domain Mutant D816H in Complex With Sunitinib (pdb code 3g0f). This binding sites where shown with 5.0 Angstroms radius around Fluorine atom.
The 3g0f structure was solved by K.S.GAJIWALA, J.C.WU, E.A.LUNNEY, G.D.DEMETRI, with X-Ray Crystallography technique, brief refinement statistics is given in the table below:
Resolution (A)20.0-2.6
Space groupP21212
a (A)79.462
b (A)101.783
c (A)105.505
alpha (°)90.00
beta (°)90.00
gamma (°)90.00
Rfactor (%)n/a
Rfree (%)n/a


Fluorine Binding Sites:

Fluorine binding site 1 out of 2 in 3g0f


Fluorine binding site 1 out of 2 in 3g0f
Click to enlarge
stereopicture of Fluorine binding site 1 out of 2 in 3g0f
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Fluorine in the PDB 3g0f. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Fluorine atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Val603, A: Lys623, A: Cys809, A: Asp810, A: Phe811, A: Ala814, A: B499001,

conact list:


AtomAtomDistance (A)
FCB A:Val6034.34
FCG2 A:Val6033.57
FCG1 A:Val6034.40
FCE A:Lys6234.60
FNZ A:Lys6234.26
FSG A:Cys8093.92
FO A:Asp8103.71
FC A:Asp8104.47
FO A:Phe8114.97
FN A:Phe8114.59
FCB A:Phe8114.55
FCE2 A:Phe8113.97
FCD1 A:Phe8114.28
FCD2 A:Phe8113.80
FCZ A:Phe8114.28
FC A:Phe8114.73
FCE1 A:Phe8114.43
FCG A:Phe8113.97
FCA A:Phe8113.93
FCB A:Ala8144.51
FF29 A:B4990010.00
FC16 A:B4990014.10
FC6 A:B4990013.68
FC5 A:B4990012.39
FC7 A:B4990012.36
FC17 A:B4990013.62
FC20 A:B4990014.97
FC15 A:B4990011.33

interactive model:


Fluorine binding site 2 out of 2 in 3g0f


Fluorine binding site 2 out of 2 in 3g0f
Click to enlarge
stereopicture of Fluorine binding site 2 out of 2 in 3g0f
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 2 of Fluorine in the PDB 3g0f. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Fluorine atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: B: Val603, B: Lys623, B: Cys809, B: Asp810, B: Phe811, B: Ala814, B: B499001,

conact list:


AtomAtomDistance (A)
FCB B:Val6034.48
FCG2 B:Val6033.41
FCG1 B:Val6034.70
FCE B:Lys6234.05
FCD B:Lys6234.10
FNZ B:Lys6234.87
FSG B:Cys8093.74
FO B:Asp8103.13
FC B:Asp8104.00
FO B:Phe8114.63
FN B:Phe8114.22
FCB B:Phe8114.22
FCE2 B:Phe8114.18
FCD1 B:Phe8113.81
FCD2 B:Phe8113.88
FCZ B:Phe8114.29
FC B:Phe8114.43
FCE1 B:Phe8114.11
FCG B:Phe8113.69
FCA B:Phe8113.57
FCB B:Ala8144.65
FF29 B:B4990010.00
FC16 B:B4990014.12
FC6 B:B4990013.68
FC5 B:B4990012.39
FC7 B:B4990012.37
FC17 B:B4990013.63
FC20 B:B4990014.99
FC15 B:B4990011.33

interactive model:




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