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Fluorine in PDB 3k1w: New Classes of Potent and Bioavailable Human Renin Inhibitors

Enzymatic activity of New Classes of Potent and Bioavailable Human Renin Inhibitors

All present enzymatic activity of New Classes of Potent and Bioavailable Human Renin Inhibitors:
3.4.23.15;

Protein crystallography data

The structure of New Classes of Potent and Bioavailable Human Renin Inhibitors, PDB code: 3k1w was solved by L.Prade, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 31.80 / 1.50
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 66.028, 88.697, 118.307, 90.00, 90.00, 90.00
R / Rfree (%) 19.9 / 23.3

Other elements in 3k1w:

The structure of New Classes of Potent and Bioavailable Human Renin Inhibitors also contains other interesting chemical elements:

Bromine (Br) 2 atoms
Chlorine (Cl) 3 atoms

Fluorine Binding Sites:

The binding sites of Fluorine atom in the New Classes of Potent and Bioavailable Human Renin Inhibitors (pdb code 3k1w). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total 2 binding sites of Fluorine where determined in the New Classes of Potent and Bioavailable Human Renin Inhibitors, PDB code: 3k1w:
Jump to Fluorine binding site number: 1; 2;

Fluorine binding site 1 out of 2 in 3k1w

Go back to Fluorine Binding Sites List in 3k1w
Fluorine binding site 1 out of 2 in the New Classes of Potent and Bioavailable Human Renin Inhibitors


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of New Classes of Potent and Bioavailable Human Renin Inhibitors within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F342

b:27.8
occ:1.00
F11 A:BFX342 0.0 27.8 1.0
C9 A:BFX342 1.3 24.5 1.0
C7 A:BFX342 2.3 21.9 1.0
C6 A:BFX342 2.4 22.6 1.0
CB A:ALA122 3.0 18.7 1.0
CD1 A:PHE119 3.3 21.2 1.0
CE2 A:PHE124 3.3 16.2 1.0
CZ A:PHE124 3.6 16.6 1.0
CL35 A:BFX342 3.6 25.2 1.0
C4 A:BFX342 3.6 22.3 1.0
C3 A:BFX342 3.6 23.5 1.0
CB A:PHE119 3.7 20.3 1.0
O A:PHE119 3.8 22.4 1.0
CA A:PHE119 3.8 22.0 1.0
CG A:PHE119 3.9 21.7 1.0
C2 A:BFX342 4.1 19.7 1.0
CD2 A:PHE124 4.2 13.8 1.0
CE1 A:PHE119 4.3 20.4 1.0
C A:PHE119 4.3 21.8 1.0
CA A:ALA122 4.4 18.3 1.0
CE1 A:PHE124 4.6 12.8 1.0
O5 A:BFX342 4.7 23.1 1.0
O A:PHE124 4.8 16.7 1.0
C33 A:BFX342 4.8 21.0 1.0
N A:ALA122 4.9 20.4 1.0
C29 A:BFX342 4.9 19.5 1.0
N A:PHE119 4.9 21.8 1.0
C8 A:BFX342 5.0 26.6 1.0

Fluorine binding site 2 out of 2 in 3k1w

Go back to Fluorine Binding Sites List in 3k1w
Fluorine binding site 2 out of 2 in the New Classes of Potent and Bioavailable Human Renin Inhibitors


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 2 of New Classes of Potent and Bioavailable Human Renin Inhibitors within 5.0Å range:
probe atom residue distance (Å) B Occ
B:F342

b:27.2
occ:1.00
F11 B:BFX342 0.0 27.2 1.0
C9 B:BFX342 1.3 26.4 1.0
C6 B:BFX342 2.4 27.8 1.0
C7 B:BFX342 2.4 26.0 1.0
CB B:ALA122 3.0 19.9 1.0
CD1 B:PHE119 3.2 24.7 1.0
CE2 B:PHE124 3.2 17.7 1.0
C3 B:BFX342 3.6 27.7 1.0
CZ B:PHE124 3.6 18.9 1.0
CL35 B:BFX342 3.6 27.0 1.0
C4 B:BFX342 3.7 26.5 1.0
CB B:PHE119 3.7 22.9 1.0
CA B:PHE119 3.8 24.6 1.0
O B:PHE119 3.8 28.2 1.0
CG B:PHE119 3.9 21.8 1.0
CD2 B:PHE124 4.0 17.8 1.0
C2 B:BFX342 4.1 27.9 1.0
CE1 B:PHE119 4.2 23.6 1.0
C B:PHE119 4.3 26.4 1.0
CA B:ALA122 4.5 22.1 1.0
O B:PHE124 4.6 18.0 1.0
CE1 B:PHE124 4.6 18.9 1.0
O5 B:BFX342 4.8 28.6 1.0
N B:ALA122 4.9 24.9 1.0
N B:PHE119 4.9 24.5 1.0
CG B:PHE124 4.9 17.5 1.0
C33 B:BFX342 5.0 23.5 1.0

Reference:

L.Remen, O.Bezencon, S.Richard-Bildstein, D.Bur, L.Prade, O.Corminboeuf, C.Boss, C.Grisostomi, T.Sifferlen, P.Strickner, P.Hess, S.Delahaye, A.Treiber, T.Weller, C.Binkert, B.Steiner, W.Fischli. New Classes of Potent and Bioavailable Human Renin Inhibitors Bioorg.Med.Chem.Lett. V. 19 6762 2009.
ISSN: ISSN 0960-894X
PubMed: 19853442
DOI: 10.1016/J.BMCL.2009.09.104
Page generated: Wed Jul 31 19:45:11 2024

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