Atomistry » Fluorine » PDB 3l8v-3lxp » 3lep
Atomistry »
  Fluorine »
    PDB 3l8v-3lxp »
      3lep »

Fluorine in PDB 3lep: Human Aldose Reductase Mutant T113C in Complex with IDD388

Enzymatic activity of Human Aldose Reductase Mutant T113C in Complex with IDD388

All present enzymatic activity of Human Aldose Reductase Mutant T113C in Complex with IDD388:
1.1.1.21;

Protein crystallography data

The structure of Human Aldose Reductase Mutant T113C in Complex with IDD388, PDB code: 3lep was solved by C.Koch, A.Heine, G.Klebe, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 10.00 / 0.99
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 49.270, 66.920, 47.340, 90.00, 92.26, 90.00
R / Rfree (%) 10.9 / 13

Other elements in 3lep:

The structure of Human Aldose Reductase Mutant T113C in Complex with IDD388 also contains other interesting chemical elements:

Bromine (Br) 2 atoms
Chlorine (Cl) 1 atom

Fluorine Binding Sites:

The binding sites of Fluorine atom in the Human Aldose Reductase Mutant T113C in Complex with IDD388 (pdb code 3lep). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total only one binding site of Fluorine was determined in the Human Aldose Reductase Mutant T113C in Complex with IDD388, PDB code: 3lep:

Fluorine binding site 1 out of 1 in 3lep

Go back to Fluorine Binding Sites List in 3lep
Fluorine binding site 1 out of 1 in the Human Aldose Reductase Mutant T113C in Complex with IDD388


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of Human Aldose Reductase Mutant T113C in Complex with IDD388 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:F600

b:6.5
occ:1.00
F9 A:388600 0.0 6.5 1.0
C7 A:388600 1.3 5.5 1.0
C6 A:388600 2.3 6.4 1.0
C2 A:388600 2.3 4.8 1.0
C1 A:388600 2.8 6.1 1.0
C A:ALA299 3.1 8.7 1.0
CA A:ALA299 3.1 8.2 1.0
N A:LEU300 3.2 6.3 1.0
CH2 A:TRP111 3.3 5.8 1.0
N A:ALA299 3.5 7.0 1.0
CB A:LEU300 3.6 6.7 1.0
C5 A:388600 3.6 6.0 1.0
C3 A:388600 3.6 5.2 1.0
CZ3 A:TRP111 3.6 5.4 1.0
CZ2 A:TRP111 3.8 5.8 1.0
O A:ALA299 3.8 9.4 1.0
O A:CYS298 3.8 5.9 0.5
C A:CYS298 3.9 5.4 0.5
C A:CYS298 4.0 6.0 0.5
CA A:LEU300 4.0 5.8 1.0
C4 A:388600 4.1 5.8 1.0
OH A:TYR309 4.2 8.2 1.0
N10 A:388600 4.2 5.4 1.0
O A:CYS298 4.2 6.0 0.5
CE2 A:TYR309 4.4 6.9 1.0
CE3 A:TRP111 4.4 4.8 1.0
CE2 A:PHE311 4.5 7.5 1.0
CE2 A:TRP111 4.5 4.7 1.0
CB A:ALA299 4.5 9.7 1.0
CB A:CYS298 4.6 7.5 0.5
CZ A:TYR309 4.7 6.9 1.0
CD2 A:TRP111 4.8 4.4 1.0
SG A:CYS298 4.8 5.2 0.5
CA A:CYS298 4.8 7.0 0.5
CG A:LEU300 4.9 7.4 1.0
CA A:CYS298 4.9 6.2 0.5

Reference:

C.Koch, A.Heine, G.Klebe. Tracing the Detail: How Mutations Affect Binding Modes and Thermodynamic Signatures of Closely Related Aldose Reductase Inhibitors J.Mol.Biol. V. 406 700 2011.
ISSN: ISSN 0022-2836
PubMed: 21185307
DOI: 10.1016/J.JMB.2010.11.058
Page generated: Sun Dec 13 11:50:17 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy