Fluorine in PDB 3ouh: PHD2-R127 with JNJ41536014

The structure of PHD2-R127 with JNJ41536014, PDB code: 3ouh was solved by H.Kim, R.Clark, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	36.93 / 2.51
Space group	P 63
Cell size a, b, c (Å), α, β, γ (°)	109.860, 109.860, 40.070, 90.00, 90.00, 120.00
R / Rfree (%)	20.5 / 27.5

The structure of PHD2-R127 with JNJ41536014 also contains other interesting chemical elements:

Iron	(Fe)	1 atom
Chlorine	(Cl)	1 atom

The binding sites of Fluorine atom in the PHD2-R127 with JNJ41536014 (pdb code 3ouh). This binding sites where shown within 5.0 Angstroms radius around Fluorine atom.
In total only one binding site of Fluorine was determined in the PHD2-R127 with JNJ41536014, PDB code: 3ouh:

Fluorine binding site 1 out of 1 in the PHD2-R127 with JNJ41536014


Mono view


Stereo pair view

A full contact list of Fluorine with other atoms in the F binding site number 1 of PHD2-R127 with JNJ41536014 within 5.0Å range: probe atom residue distance (Å) B Occ A:F417 b:23.6 occ:1.00 F A:014417 0.0 23.6 1.0 C8 A:014417 1.4 18.9 1.0 C10 A:014417 2.3 21.2 1.0 C7 A:014417 2.4 16.6 1.0 CL A:014417 2.7 25.9 1.0 NH1 A:ARG322 3.6 28.9 1.0 C11 A:014417 3.6 18.5 1.0 C6 A:014417 3.6 14.7 1.0 NH2 A:ARG322 3.9 30.3 1.0 C12 A:014417 4.1 14.5 1.0 O A:ASP315 4.1 20.4 1.0 CZ A:ARG322 4.2 27.5 1.0 CZ2 A:TRP389 4.3 16.3 1.0 CH2 A:TRP389 4.3 16.3 1.0 OH A:TYR310 4.6 36.4 1.0 N3 A:014417 4.8 8.2 1.0 CA A:ASP315 4.9 20.6 1.0 C A:ASP315 5.0 21.1 1.0

M.D.Rosen, H.Venkatesan, H.M.Peltier, S.D.Bembenek, K.C.Kanelakis, L.X.Zhao, B.E.Leonard, F.M.Hocutt, X.Wu, H.L.Palomino, T.I.Brondstetter, P.V.Haugh, L.Cagnon, W.Yan, L.A.Liotta, A.Young, T.Mirzadegan, N.P.Shankley, T.D.Barrett, M.H.Rabinowitz. Benzimidazole-2-Pyrazole Hif Prolyl 4-Hydroxylase Inhibitors As Oral Erythropoietin Secretagogues. Acs Med Chem Lett V. 1 526 2010.
ISSN: ISSN 1948-5875
PubMed: 24900242
DOI: 10.1021/ML100198Y